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Orthologous genes in OrthoFinder**

Species Gene Description
 sly-u.5   544138   uncharacterized LOC544138 
 sly-r.6   544138   uncharacterized LOC544138 
 sly-u.5   101254555   small ribosomal subunit protein uS14z/uS14y/uS14x 
 ath-u.5   AT3G43980   Ribosomal protein S14p/S29e family protein 
 ath-u.5   AT3G44010   Ribosomal protein S14p/S29e family protein 
 ath-u.5   AT4G33865   Ribosomal protein S14p/S29e family protein 
 gma-u.5   100790389   40S ribosomal protein S29 
 gma-u.5   100817876   40S ribosomal protein S29 
 gma-u.5   100305476   40S ribosomal protein S29 
 ppo-u.5   7468614   40S ribosomal protein S29 
 ppo-u.5   18096278   40S ribosomal protein S29 
 mtr-u.5   25490304   40S ribosomal protein S29 
 mtr-u.5   25485353   40S ribosomal protein S29 
 mtr-u.5   11437603   40S ribosomal protein S29 
 osa-u.5   4350976   small ribosomal subunit protein uS14 
 osa-u.5   9267266   small ribosomal subunit protein uS14 
 osa-u.5   4352308   small ribosomal subunit protein uS14 
 zma-u.5   100303896   40S ribosomal protein S29-like 
 zma-u.5   100284803   40S ribosomal protein S29 
 zma-u.5   100280803   40S ribosomal protein S29 

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Top 50 coexpressed genes to 544138 (sly-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 544138 (sly-u.5 coexpression data)

CoexMap"544138"


slyLOC544138 | Entrez gene ID : 544138    
Species sly ath gma ppo mtr osa zma cre ghi cit vvi hvu bdi sot bra sbi tae nta bna
Paralog 3 3 3 2 3 3 3 0 0 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG sly03010 [list] [network] Ribosome (6225 genes)
GO BP
GO:0006412 [list] [network] translation  (492 genes)  IEA  
GO CC
GO:0022627 [list] [network] cytosolic small ribosomal subunit  (79 genes)  IEA  
GO:0005840 [list] [network] ribosome  (354 genes)  IEA  
GO MF
GO:0003735 [list] [network] structural constituent of ribosome  (342 genes)  IEA  
GO:0008270 [list] [network] zinc ion binding  (1242 genes)  IEA  
Protein NP_001294917.1 [sequence] [blastp]
Subcellular
localization
wolf
cyto 4,  extr 2,  cyto_nucl 2,  cyto_E.R. 2  (predict for NP_001294917.1)
Subcellular
localization
TargetP
chlo 4,  other 3,  mito 3  (predict for NP_001294917.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

sly-u.5
for
544138

.
sly-r.6
for
544138

.
sly-u.5
for
101254555

.
ath-u.5
for
AT3G43980

.
ath-u.5
for
AT3G44010

.
ath-u.5
for
AT4G33865

.
gma-u.5
for
100790389

.
gma-u.5
for
100817876

.
gma-u.5
for
100305476

.
ppo-u.5
for
7468614

.
ppo-u.5
for
18096278

.
mtr-u.5
for
25490304

.
mtr-u.5
for
25485353

.
mtr-u.5
for
11437603

.
osa-u.5
for
4350976

.
osa-u.5
for
9267266

.
osa-u.5
for
4352308

.
zma-u.5
for
100303896

.
zma-u.5
for
100284803

.
zma-u.5
for
100280803

.


Ortholog ID: 2157
Species ath ath gma gma sly sly osa osa zma zma bra bra ppo ppo mtr mtr tae tae hvu hvu ghi ghi bna bna cre sbi sbi sot sot cit cit bdi bdi
Symbol AT4G33865 AT3G43980 LOC100305476 LOC100790389 LOC544138 LOC101254555 LOC4350976 LOC4352308 LOC100303896 LOC100284803 LOC103862274 LOC103834454 LOC7468614 LOC7497336 LOC11437603 LOC25485353 LOC123102740 LOC123119898 LOC123452440 LOC123451756 LOC107894316 LOC107886957 LOC106370844 LOC111211610 CHLRE_08g358556v5 LOC8079144 LOC8067195 LOC102592795 LOC102599926 LOC102611236 LOC102611515 LOC106865732 LOC106866596
Function* Ribosomal protein S14p/S29e family protein Ribosomal protein S14p/S29e family protein 40S ribosomal protein S29 40S ribosomal protein S29 uncharacterized LOC544138 small ribosomal subunit protein uS14z/uS14y/uS14x small ribosomal subunit protein uS14 small ribosomal subunit protein uS14 40S ribosomal protein S29-like 40S ribosomal protein S29 40S ribosomal protein S29 40S ribosomal protein S29 40S ribosomal protein S29 40S ribosomal protein S29 40S ribosomal protein S29 40S ribosomal protein S29 40S ribosomal protein S29-like 40S ribosomal protein S29-like 40S ribosomal protein S29 40S ribosomal protein S29 40S ribosomal protein S29 40S ribosomal protein S29 40S ribosomal protein S29 40S ribosomal protein S29 ribosomal protein S29;uncharacterized protein 40S ribosomal protein S29 40S ribosomal protein S29 40S ribosomal protein S29 40S ribosomal protein S29 40S ribosomal protein S29-like 40S ribosomal protein S29 40S ribosomal protein S29 40S ribosomal protein S29
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03010 Ribosome 17
ath03040 Spliceosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03010 Ribosome 17
ath03040 Spliceosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03010 Ribosome 19
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03010 Ribosome 17
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03010 Ribosome 20
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03010 Ribosome 19
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03010 Ribosome 18
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03010 Ribosome 18
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03010 Ribosome 18
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03010 Ribosome 16
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03010 Ribosome 17
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03010 Ribosome 11
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03010 Ribosome 16
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03010 Ribosome 16
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03010 Ribosome 16
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03010 Ribosome 12
mtr03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03010 Ribosome 10
tae03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03010 Ribosome 15
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03010 Ribosome 11
hvu03040 Spliceosome 4
hvu03018 RNA degradation 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03010 Ribosome 18
hvu04120 Ubiquitin mediated proteolysis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03010 Ribosome 6
ghi00480 Glutathione metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03010 Ribosome 10
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03010 Ribosome 9
bna03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03010 Ribosome 10
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cre03010 Ribosome 17
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03010 Ribosome 12
sbi03040 Spliceosome 5
sbi03008 Ribosome biogenesis in eukaryotes 2
sbi03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03010 Ribosome 20
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03010 Ribosome 18
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03010 Ribosome 19
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03010 Ribosome 20
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03010 Ribosome 18
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03010 Ribosome 10
bdi03040 Spliceosome 2
bdi03060 Protein export 2
bdi04141 Protein processing in endoplasmic reticulum 2
bdi04145 Phagosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03010 Ribosome 15
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 829529 823515 100305476 100790389 544138 101254555 4350976 4352308 100303896 100284803 103862274 103834454 7468614 7497336 11437603 25485353 123102740 123119898 123452440 123451756 107894316 107886957 106370844 111211610 5729251 8079144 8067195 102592795 102599926 102611236 102611515 106865732 106866596
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