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Orthologous genes in OrthoFinder**

Species Gene Description
 gma-u.5   SCA1   plasma membrane Ca2+-ATPase 
 gma-r.7   SCA1   plasma membrane Ca2+-ATPase 
 gma-m.5   SCA1   plasma membrane Ca2+-ATPase 
 gma-u.5   100805063   putative calcium-transporting ATPase 11, plasma membrane-type 
 gma-u.5   100802659   calcium-transporting ATPase 9, plasma membrane-type 
 gma-u.5   100801260   putative calcium-transporting ATPase 11, plasma membrane-type 
 mtr-u.5   25491279   calcium-transporting ATPase 4, plasma membrane-type 
 mtr-u.5   25499173   calcium-transporting ATPase 12, plasma membrane-type 
 mtr-u.5   25501899   putative calcium-transporting ATPase 11, plasma membrane-type 
 ppo-u.5   7469478   calcium-transporting ATPase 9, plasma membrane-type 
 ppo-u.5   7476868   calcium-transporting ATPase 12, plasma membrane-type 
 ppo-u.5   18101104   calcium-transporting ATPase 2, plasma membrane-type 
 ath-u.5   ACA1   autoinhibited Ca2+-ATPase 1 
 ath-u.5   ACA8   autoinhibited Ca2+ -ATPase 
 ath-u.5   ACA2   calcium ATPase 2 
 vvi-u.5   100262268   putative calcium-transporting ATPase 13, plasma membrane-type 
 vvi-u.5   100251227   calcium-transporting ATPase 10, plasma membrane-type 
 vvi-u.5   100247373   Ca2+-transporting ATPase-like 
 sly-u.5   101265214   calcium-transporting ATPase 9, plasma membrane-type 
 sly-u.5   101262099   putative calcium-transporting ATPase 11, plasma membrane-type 
 osa-u.5   9267724   calcium-transporting ATPase 5, plasma membrane-type-like 
 osa-u.5   4351449   probable calcium-transporting ATPase 9, plasma membrane-type 
 zma-u.5   103645972   calcium-transporting ATPase 5, plasma membrane-type 
 zma-u.5   103650775   calcium-transporting ATPase 1, plasma membrane-type 
 zma-u.5   103642035   calcium-transporting ATPase 5, plasma membrane-type 

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Top 50 coexpressed genes to SCA1 (gma-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to SCA1 (gma-u.5 coexpression data)

CoexMap"547567"


gmaSCA1 | Entrez gene ID : 547567      
Species gma mtr ppo ath vvi sly osa zma sbi nta bra cre hvu cit bdi sot tae bna ghi
Paralog 6 3 3 3 3 2 2 3 0 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0070588 [list] [network] calcium ion transmembrane transport  (88 genes)  IEA  
GO CC
GO:0005886 [list] [network] plasma membrane  (1870 genes)  IEA  
GO:0043231 [list] [network] intracellular membrane-bounded organelle  (10455 genes)  IEA  
GO MF
GO:0005388 [list] [network] P-type calcium transporter activity  (31 genes)  IEA  
GO:0005516 [list] [network] calmodulin binding  (132 genes)  IEA  
GO:0016887 [list] [network] ATP hydrolysis activity  (756 genes)  IEA  
GO:0005524 [list] [network] ATP binding  (3753 genes)  IEA  
Protein NP_001238485.2 [sequence] [blastp]
XP_040862818.1 [sequence] [blastp]
Subcellular
localization
wolf
E.R. 4,  plas 4,  chlo 1,  cyto 1,  cysk 1  (predict for NP_001238485.2)
plas 4,  E.R. 4,  cyto 1  (predict for XP_040862818.1)
Subcellular
localization
TargetP
other 8,  chlo 3  (predict for NP_001238485.2)
other 8,  mito 3  (predict for XP_040862818.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

gma-u.5
for
SCA1

.
gma-r.7
for
SCA1

.
gma-m.5
for
SCA1

.
gma-u.5
for
100805063

.
gma-u.5
for
100802659

.
gma-u.5
for
100801260

.
mtr-u.5
for
25491279

.
mtr-u.5
for
25499173

.
mtr-u.5
for
25501899

.
ppo-u.5
for
7469478

.
ppo-u.5
for
7476868

.
ppo-u.5
for
18101104

.
ath-u.5
for
ACA1

.
ath-u.5
for
ACA8

.
ath-u.5
for
ACA2

.
vvi-u.5
for
100262268

.
vvi-u.5
for
100251227

.
vvi-u.5
for
100247373

.
sly-u.5
for
101265214

.
sly-u.5
for
101262099

.
osa-u.5
for
9267724

.
osa-u.5
for
4351449

.
zma-u.5
for
103645972

.
zma-u.5
for
103650775

.
zma-u.5
for
103642035

.


Ortholog ID: 74
Species ath ath gma gma sly sly osa osa zma zma bra bra vvi vvi mtr tae tae hvu hvu ghi ghi bna bna cre cre sbi sbi sot sot cit cit bdi bdi nta nta
Symbol ACA4 ACA11 LOC100810758 LOC100787728 LOC101262099 LOC101265214 LOC9267724 LOC4336912 LOC103645972 LOC100383276 LOC103851787 LOC103869201 LOC100259585 LOC100246545 LOC11406848 LOC123062786 LOC123162884 LOC123397922 LOC123449394 LOC107889412 LOC107950868 LOC125603083 LOC111199778 CHLRE_01g036350v5 CHLRE_16g681750v5 LOC8062510 LOC8055893 LOC102605827 LOC102587157 LOC102616894 LOC102623812 LOC100833572 LOC100826674 LOC107801610 LOC107781432
Function* autoinhibited Ca(2+)-ATPase autoinhibited Ca2+-ATPase 11 calcium-transporting ATPase 1 putative calcium-transporting ATPase 13, plasma membrane-type putative calcium-transporting ATPase 11, plasma membrane-type calcium-transporting ATPase 9, plasma membrane-type calcium-transporting ATPase 5, plasma membrane-type-like calcium-transporting ATPase 5, plasma membrane-type-like calcium-transporting ATPase 5, plasma membrane-type uncharacterized LOC100383276 calcium-transporting ATPase 8, plasma membrane-type calcium-transporting ATPase 9, plasma membrane-type-like putative calcium-transporting ATPase 13, plasma membrane-type putative calcium-transporting ATPase 11, plasma membrane-type calcium-transporting ATPase 2, plasma membrane-type calcium-transporting ATPase 7, plasma membrane-type calcium-transporting ATPase 5, plasma membrane-type calcium-transporting ATPase 10, plasma membrane-type calcium-transporting ATPase 2, plasma membrane-type-like putative calcium-transporting ATPase 11, plasma membrane-type calcium-transporting ATPase 12, plasma membrane-type calcium-transporting ATPase 9, plasma membrane-type-like calcium-transporting ATPase 1 uncharacterized protein uncharacterized protein calcium-transporting ATPase 3, plasma membrane-type calcium-transporting ATPase 5, plasma membrane-type calcium-transporting ATPase 9, plasma membrane-type putative calcium-transporting ATPase 13, plasma membrane-type calcium-transporting ATPase 12, plasma membrane-type calcium-transporting ATPase 1 probable calcium-transporting ATPase 6, plasma membrane-type calcium-transporting ATPase 7, plasma membrane-type calcium-transporting ATPase 4, plasma membrane-type putative calcium-transporting ATPase 11, plasma membrane-type
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath01230 Biosynthesis of amino acids 3
ath00910 Nitrogen metabolism 3
ath01310 Nitrogen cycle 3
ath01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma04142 Lysosome 4
gma04144 Endocytosis 4
gma05100 Bacterial invasion of epithelial cells 4
gma04075 Plant hormone signal transduction 2
gma00500 Starch and sucrose metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly04626 Plant-pathogen interaction 3
sly04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03440 Homologous recombination 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa04626 Plant-pathogen interaction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa04075 Plant hormone signal transduction 7
osa04016 MAPK signaling pathway - plant 5
osa00906 Carotenoid biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma00500 Starch and sucrose metabolism 6
zma00010 Glycolysis / Gluconeogenesis 4
zma00061 Fatty acid biosynthesis 3
zma00620 Pyruvate metabolism 3
zma01212 Fatty acid metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma04626 Plant-pathogen interaction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi00500 Starch and sucrose metabolism 3
vvi00130 Ubiquinone and other terpenoid-quinone biosynthesis 2
vvi01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr04075 Plant hormone signal transduction 2
mtr04626 Plant-pathogen interaction 2
mtr00564 Glycerophospholipid metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae04626 Plant-pathogen interaction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae04626 Plant-pathogen interaction 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu04075 Plant hormone signal transduction 3
hvu04626 Plant-pathogen interaction 3
hvu01240 Biosynthesis of cofactors 3
hvu00040 Pentose and glucuronate interconversions 2
hvu00053 Ascorbate and aldarate metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi00900 Terpenoid backbone biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi04144 Endocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot04122 Sulfur relay system 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit04016 MAPK signaling pathway - plant 5
cit04075 Plant hormone signal transduction 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03022 Basal transcription factors 4
nta00564 Glycerophospholipid metabolism 2
nta04712 Circadian rhythm - plant 2
nta04146 Peroxisome 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 818754 824900 100810758 100787728 101262099 101265214 9267724 4336912 103645972 100383276 103851787 103869201 100259585 100246545 11406848 123062786 123162884 123397922 123449394 107889412 107950868 125603083 111199778 5715475 5717561 8062510 8055893 102605827 102587157 102616894 102623812 100833572 100826674 107801610 107781432
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