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Orthologous genes in OrthoFinder**

Species Gene Description
 gma-u.5   547569   copper chaperone homolog CCH 
 gma-r.7   547569   copper chaperone homolog CCH 
 gma-m.5   547569   copper chaperone homolog CCH 
 gma-u.5   100799342   copper transport protein ATX1 
 gma-u.5   100306415   copper transport protein ATX1 
 mtr-u.5   11421564   copper transport protein ATX1 
 mtr-u.5   11411763   copper transport protein ATX1 
 ppo-u.5   7477180   copper transport protein ATX1 
 ppo-u.5   7494892   copper transport protein ATX1 
 ath-u.5   CCH   copper chaperone 
 ath-u.5   ATX1   homolog of anti-oxidant 1 
 vvi-u.5   100247137   copper transport protein ATX1 
 sly-u.5   101247578   copper transport protein ATX1 
 sly-u.5   CCH   copper chaperone 
 osa-u.5   4344925   copper transport protein ATX1 
 osa-u.5   9272622   copper transport protein ATX1 
 zma-u.5   103647091   neurogenic protein mastermind-like 
 zma-u.5   100282864   copper chaperone 
 zma-u.5   100192891   uncharacterized LOC100192891 

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Top 50 coexpressed genes to 547569 (gma-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 547569 (gma-u.5 coexpression data)

CoexMap"547569"


gmaLOC547569 | Entrez gene ID : 547569      
Species gma mtr ppo ath vvi sly osa zma sbi nta bra cre hvu cit bdi sot tae bna ghi
Paralog 5 2 2 2 1 2 2 3 0 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO CC
GO MF
GO:0046872 [list] [network] metal ion binding  (3089 genes)  IEA  
Protein NP_001238516.2 [sequence] [blastp]
XP_025980143.1 [sequence] [blastp]
XP_040862528.1 [sequence] [blastp]
Subcellular
localization
wolf
chlo 7,  mito 1,  nucl 1,  cyto 1,  cyto_nucl 1,  cyto_mito 1,  mito_plas 1  (predict for NP_001238516.2)
chlo 10  (predict for XP_025980143.1)
extr 6,  vacu 2,  cyto 1,  plas 1,  cyto_plas 1  (predict for XP_040862528.1)
Subcellular
localization
TargetP
other 5  (predict for NP_001238516.2)
other 7  (predict for XP_025980143.1)
other 3  (predict for XP_040862528.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

gma-u.5
for
547569

.
gma-r.7
for
547569

.
gma-m.5
for
547569

.
gma-u.5
for
100799342

.
gma-u.5
for
100306415

.
mtr-u.5
for
11421564

.
mtr-u.5
for
11411763

.
ppo-u.5
for
7477180

.
ppo-u.5
for
7494892

.
ath-u.5
for
CCH

.
ath-u.5
for
ATX1

.
vvi-u.5
for
100247137

.
sly-u.5
for
101247578

.
sly-u.5
for
CCH

.
osa-u.5
for
4344925

.
osa-u.5
for
9272622

.
zma-u.5
for
103647091

.
zma-u.5
for
100282864

.
zma-u.5
for
100192891

.


Ortholog ID: 2159
Species ath ath gma sly sly osa osa zma zma bra bra vvi ppo ppo mtr mtr tae tae hvu hvu ghi ghi bna bna cre sbi sbi sot sot cit cit bdi bdi nta nta
Symbol ATX1 CCH LOC100799342 LOC101247578 CCH LOC9272622 LOC4344925 LOC103647091 LOC100192891 LOC103830045 LOC103850556 LOC100247137 LOC7477180 LOC7494892 LOC11411763 LOC11421564 LOC123167505 LOC123148856 LOC123410004 LOC123408376 LOC107927608 LOC107922309 LOC106352912 LOC106445331 CHLRE_09g392467v5 LOC8071498 LOC8059624 LOC102580838 LOC102597804 LOC102614126 LOC102624383 LOC100823139 LOC100843688 LOC107768675 LOC107760780
Function* homolog of anti-oxidant 1 copper chaperone copper transport protein ATX1 copper transport protein ATX1 copper chaperone copper transport protein ATX1 copper transport protein ATX1 neurogenic protein mastermind-like uncharacterized LOC100192891 copper transport protein CCH copper transport protein ATX1 copper transport protein ATX1 copper transport protein ATX1 copper transport protein ATX1 copper transport protein ATX1 copper transport protein ATX1 copper transport protein ATX1 copper transport protein ATX1 copper transport protein ATX1 copper transport protein ATX1-like copper transport protein ATX1 copper transport protein ATX1 copper transport protein CCH copper transport protein CCH uncharacterized protein copper transport protein ATX1 copper transport protein ATX1 copper transport protein ATX1-like copper transport protein ATX1-like copper transport protein ATX1 copper transport protein ATX1-like copper transport protein ATX1 copper transport protein ATX1 copper transport protein ATX1-like copper transport protein ATX1
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath00190 Oxidative phosphorylation 7
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath02010 ABC transporters 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma00564 Glycerophospholipid metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa00190 Oxidative phosphorylation 2
osa04120 Ubiquitin mediated proteolysis 2
osa00480 Glutathione metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra00190 Oxidative phosphorylation 5
bra04145 Phagosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo00190 Oxidative phosphorylation 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr01240 Biosynthesis of cofactors 2
mtr00480 Glutathione metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00250 Alanine, aspartate and glutamate metabolism 3
tae00410 beta-Alanine metabolism 3
tae00430 Taurine and hypotaurine metabolism 3
tae00650 Butanoate metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu04145 Phagosome 5
hvu04144 Endocytosis 3
hvu04148 Efferocytosis 3
hvu00190 Oxidative phosphorylation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu00190 Oxidative phosphorylation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00190 Oxidative phosphorylation 4
ghi03083 Polycomb repressive complex 2
ghi04120 Ubiquitin mediated proteolysis 2
ghi04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00190 Oxidative phosphorylation 8
ghi03010 Ribosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03083 Polycomb repressive complex 2
bna04120 Ubiquitin mediated proteolysis 2
bna04141 Protein processing in endoplasmic reticulum 2
bna00910 Nitrogen metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00910 Nitrogen metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cre03040 Spliceosome 7
cre00190 Oxidative phosphorylation 4
cre03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi04136 Autophagy - other 3
sbi04144 Endocytosis 3
sbi00190 Oxidative phosphorylation 2
sbi04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot04146 Peroxisome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03083 Polycomb repressive complex 3
sot04120 Ubiquitin mediated proteolysis 3
sot04141 Protein processing in endoplasmic reticulum 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit00190 Oxidative phosphorylation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit00190 Oxidative phosphorylation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi04145 Phagosome 3
bdi00190 Oxidative phosphorylation 2
bdi04144 Endocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00270 Cysteine and methionine metabolism 4
nta00999 Biosynthesis of various plant secondary metabolites 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00270 Cysteine and methionine metabolism 4
nta00999 Biosynthesis of various plant secondary metabolites 4
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 842940 824790 100799342 101247578 543877 9272622 4344925 103647091 100192891 103830045 103850556 100247137 7477180 7494892 11411763 11421564 123167505 123148856 123410004 123408376 107927608 107922309 106352912 106445331 5720251 8071498 8059624 102580838 102597804 102614126 102624383 100823139 100843688 107768675 107760780
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