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Orthologous genes in OrthoFinder**

Species Gene Description
 gma-u.5   547640   putative NADH-dependent hydroxypyruvate reductase 
 gma-r.7   547640   putative NADH-dependent hydroxypyruvate reductase 
 gma-m.5   547640   putative NADH-dependent hydroxypyruvate reductase 
 gma-u.5   P42-1   conversion of hydroxypyruvate to glycerate 
 mtr-u.5   25485608   glycerate dehydrogenase 
 ppo-u.5   7453649   glycerate dehydrogenase 
 ath-u.5   HPR   hydroxypyruvate reductase 
 vvi-u.5   100262344   glycerate dehydrogenase HPR, peroxisomal 
 sly-u.5   100191110   glycerate dehydrogenase 
 osa-u.5   4327981   glycerate dehydrogenase 
 zma-u.5   100193709   uncharacterized LOC100193709 

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Top 50 coexpressed genes to 547640 (gma-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 547640 (gma-u.5 coexpression data)

CoexMap"547640"


gmaLOC547640 | Entrez gene ID : 547640      
Species gma mtr ppo ath vvi sly osa zma sbi nta bra cre hvu cit bdi sot tae bna ghi
Paralog 4 1 1 1 1 1 1 1 0 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG gmx00260 [list] [network] Glycine, serine and threonine metabolism (112 genes)
gmx00630 [list] [network] Glyoxylate and dicarboxylate metabolism (134 genes)
gmx01200 [list] [network] Carbon metabolism (489 genes)
GO BP
GO CC
GO:0005829 [list] [network] cytosol  (1702 genes)  IEA  
GO MF
GO:0008465 [list] [network] hydroxypyruvate reductase (NADH) activity  (3 genes)  IEA  
GO:0016618 [list] [network] hydroxypyruvate reductase [NAD(P)H] activity  (9 genes)  IEA  
GO:0030267 [list] [network] glyoxylate reductase (NADPH) activity  (10 genes)  IEA  
GO:0051287 [list] [network] NAD binding  (159 genes)  IEA  
Protein NP_001235753.2 [sequence] [blastp]
Subcellular
localization
wolf
chlo 4,  pero 4,  cyto 2,  chlo_mito 2  (predict for NP_001235753.2)
Subcellular
localization
TargetP
other 5  (predict for NP_001235753.2)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

gma-u.5
for
547640

.
gma-r.7
for
547640

.
gma-m.5
for
547640

.
gma-u.5
for
P42-1

.
mtr-u.5
for
25485608

.
ppo-u.5
for
7453649

.
ath-u.5
for
HPR

.
vvi-u.5
for
100262344

.
sly-u.5
for
100191110

.
osa-u.5
for
4327981

.
zma-u.5
for
100193709

.


Ortholog ID: 7847
Species ath gma gma sly osa zma bra bra vvi ppo mtr tae tae hvu ghi ghi bna bna cre sbi sot cit bdi nta nta
Symbol HPR P42-1 LOC547640 LOC100191110 LOC4327981 LOC100193709 LOC103831222 LOC103830991 LOC100262344 LOC7453649 LOC25485608 LOC123135337 LOC123131541 LOC123406003 LOC107921219 LOC107947132 LOC106353990 LOC106353866 CHLRE_06g295450v5 LOC110434935 LOC102601319 LOC102625481 LOC100838606 LOC107765918 LOC107805344
Function* hydroxypyruvate reductase conversion of hydroxypyruvate to glycerate putative NADH-dependent hydroxypyruvate reductase glycerate dehydrogenase glycerate dehydrogenase uncharacterized LOC100193709 glycerate dehydrogenase HPR, peroxisomal glycerate dehydrogenase HPR, peroxisomal glycerate dehydrogenase HPR, peroxisomal glycerate dehydrogenase glycerate dehydrogenase glycerate dehydrogenase glycerate dehydrogenase glycerate dehydrogenase glycerate dehydrogenase glycerate dehydrogenase glycerate dehydrogenase HPR, peroxisomal-like glycerate dehydrogenase HPR, peroxisomal uncharacterized protein glycerate dehydrogenase glycerate dehydrogenase glycerate dehydrogenase glycerate dehydrogenase glycerate dehydrogenase glycerate dehydrogenase
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath01200 Carbon metabolism 15
ath00710 Carbon fixation by Calvin cycle 9
ath00630 Glyoxylate and dicarboxylate metabolism 7
ath00260 Glycine, serine and threonine metabolism 4
ath01230 Biosynthesis of amino acids 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma01200 Carbon metabolism 12
gma00630 Glyoxylate and dicarboxylate metabolism 8
gma00710 Carbon fixation by Calvin cycle 6
gma00260 Glycine, serine and threonine metabolism 5
gma04146 Peroxisome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma00630 Glyoxylate and dicarboxylate metabolism 6
gma01200 Carbon metabolism 6
gma00260 Glycine, serine and threonine metabolism 3
gma04146 Peroxisome 3
gma00196 Photosynthesis - antenna proteins 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly01200 Carbon metabolism 8
sly00710 Carbon fixation by Calvin cycle 5
sly00260 Glycine, serine and threonine metabolism 3
sly00630 Glyoxylate and dicarboxylate metabolism 3
sly01230 Biosynthesis of amino acids 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa01200 Carbon metabolism 8
osa00710 Carbon fixation by Calvin cycle 5
osa00195 Photosynthesis 4
osa00630 Glyoxylate and dicarboxylate metabolism 3
osa04146 Peroxisome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma01200 Carbon metabolism 8
zma00710 Carbon fixation by Calvin cycle 7
zma00195 Photosynthesis 3
zma00630 Glyoxylate and dicarboxylate metabolism 2
zma00010 Glycolysis / Gluconeogenesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra00630 Glyoxylate and dicarboxylate metabolism 8
bra01200 Carbon metabolism 7
bra00260 Glycine, serine and threonine metabolism 5
bra00220 Arginine biosynthesis 4
bra00250 Alanine, aspartate and glutamate metabolism 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra00630 Glyoxylate and dicarboxylate metabolism 6
bra01200 Carbon metabolism 6
bra00260 Glycine, serine and threonine metabolism 3
bra00910 Nitrogen metabolism 2
bra00710 Carbon fixation by Calvin cycle 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi01200 Carbon metabolism 8
vvi00630 Glyoxylate and dicarboxylate metabolism 6
vvi00710 Carbon fixation by Calvin cycle 5
vvi01230 Biosynthesis of amino acids 3
vvi00260 Glycine, serine and threonine metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo01200 Carbon metabolism 11
ppo00710 Carbon fixation by Calvin cycle 7
ppo00630 Glyoxylate and dicarboxylate metabolism 5
ppo01230 Biosynthesis of amino acids 4
ppo00030 Pentose phosphate pathway 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr01200 Carbon metabolism 4
mtr00010 Glycolysis / Gluconeogenesis 2
mtr00710 Carbon fixation by Calvin cycle 2
mtr01230 Biosynthesis of amino acids 2
mtr00630 Glyoxylate and dicarboxylate metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae01200 Carbon metabolism 8
tae00630 Glyoxylate and dicarboxylate metabolism 5
tae00710 Carbon fixation by Calvin cycle 3
tae00260 Glycine, serine and threonine metabolism 3
tae04146 Peroxisome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae01200 Carbon metabolism 6
tae00710 Carbon fixation by Calvin cycle 3
tae00260 Glycine, serine and threonine metabolism 3
tae00630 Glyoxylate and dicarboxylate metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu01200 Carbon metabolism 5
hvu00630 Glyoxylate and dicarboxylate metabolism 4
hvu04146 Peroxisome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi01200 Carbon metabolism 6
ghi00630 Glyoxylate and dicarboxylate metabolism 4
ghi00010 Glycolysis / Gluconeogenesis 2
ghi00710 Carbon fixation by Calvin cycle 2
ghi01230 Biosynthesis of amino acids 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi01200 Carbon metabolism 6
ghi00630 Glyoxylate and dicarboxylate metabolism 4
ghi00010 Glycolysis / Gluconeogenesis 2
ghi00710 Carbon fixation by Calvin cycle 2
ghi01230 Biosynthesis of amino acids 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00260 Glycine, serine and threonine metabolism 4
bna00630 Glyoxylate and dicarboxylate metabolism 4
bna01200 Carbon metabolism 4
bna00230 Purine metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00260 Glycine, serine and threonine metabolism 4
bna00630 Glyoxylate and dicarboxylate metabolism 4
bna01200 Carbon metabolism 4
bna00230 Purine metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cre01200 Carbon metabolism 6
cre00630 Glyoxylate and dicarboxylate metabolism 5
cre00260 Glycine, serine and threonine metabolism 4
cre00250 Alanine, aspartate and glutamate metabolism 2
cre01210 2-Oxocarboxylic acid metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi00196 Photosynthesis - antenna proteins 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot01200 Carbon metabolism 8
sot00630 Glyoxylate and dicarboxylate metabolism 6
sot00710 Carbon fixation by Calvin cycle 6
sot00195 Photosynthesis 2
sot00260 Glycine, serine and threonine metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit01200 Carbon metabolism 9
cit00710 Carbon fixation by Calvin cycle 6
cit00195 Photosynthesis 6
cit00630 Glyoxylate and dicarboxylate metabolism 4
cit01230 Biosynthesis of amino acids 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi01200 Carbon metabolism 10
bdi00630 Glyoxylate and dicarboxylate metabolism 6
bdi00710 Carbon fixation by Calvin cycle 6
bdi00195 Photosynthesis 3
bdi00260 Glycine, serine and threonine metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta01200 Carbon metabolism 11
nta00630 Glyoxylate and dicarboxylate metabolism 9
nta04146 Peroxisome 6
nta00260 Glycine, serine and threonine metabolism 4
nta00620 Pyruvate metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta01200 Carbon metabolism 10
nta00630 Glyoxylate and dicarboxylate metabolism 9
nta04146 Peroxisome 6
nta00260 Glycine, serine and threonine metabolism 4
nta00250 Alanine, aspartate and glutamate metabolism 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 843129 548099 547640 100191110 4327981 100193709 103831222 103830991 100262344 7453649 25485608 123135337 123131541 123406003 107921219 107947132 106353990 106353866 5717070 110434935 102601319 102625481 100838606 107765918 107805344
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