ATTED-II : GeneCoexpression result

Select Species^**

Orthologous genes in OrthoFinder^**

Species	Gene	Description
gma-u.5	GOLS	galactinol synthase
gma-r.7	GOLS	galactinol synthase
gma-m.5	GOLS	galactinol synthase
gma-u.5	100819991	galactinol synthase 1
gma-u.5	100792129	galactinol synthase 2
gma-u.5	100800249	galactinol synthase 2
mtr-u.5	11416931	galactinol synthase 2
mtr-u.5	11416930	galactinol synthase 2
mtr-u.5	11433093	galactinol synthase 1
ppo-u.5	7455409	galactinol synthase 1
ppo-u.5	7471087	galactinol synthase 1
ppo-u.5	7492393	galactinol synthase 1
ath-u.5	GolS4	galactinol synthase 4
ath-u.5	GolS1	galactinol synthase 1
ath-u.5	GolS3	galactinol synthase 3
bra-r.6	103838508	galactinol synthase 4
bra-r.6	103838671	galactinol synthase 2
bra-r.6	103866399	galactinol synthase 1
vvi-u.5	100254435	galactinol synthase 2
vvi-u.5	100255485	galactinol synthase 1
vvi-u.5	100257918	galactinol synthase 2
ghi-r.1	107893739	galactinol synthase 2
ghi-r.1	107912304	galactinol synthase 1
ghi-r.1	107920315	galactinol synthase 2
bna-r.1	106396142	galactinol synthase 1
bna-r.1	106377002	galactinol synthase 3
bna-r.1	106379755	galactinol synthase 4-like
cit-r.1	102608882	galactinol synthase 2-like
cit-r.1	102619819	galactinol synthase 1
sly-u.5	101244339	galactinol synthase 2-like
sly-u.5	101261450	galactinol synthase 1
sly-u.5	GolS2	galactinol synthase
sot-r.1	102591561	galactinol synthase 1
sot-r.1	102589277	galactinol synthase 2
sot-r.1	102592897	galactinol synthase 2-like
nta-r.1	107783847	galactinol synthase 2
nta-r.1	107763259	galactinol synthase 2
nta-r.1	107794006	galactinol synthase 1-like
osa-u.5	4332654	galactinol synthase 1
osa-u.5	4344351	galactinol synthase 2
zma-u.5	606403	galactinol synthase 1
zma-u.5	606405	galactinol synthase 2
tae-r.2	123048636	galactinol synthase 2
tae-r.2	123040542	galactinol synthase 2
tae-r.2	123043587	galactinol synthase 2
hvu-r.1	123424659	galactinol synthase 2-like
hvu-r.1	123429407	galactinol synthase 2-like
hvu-r.1	123446536	galactinol synthase 2-like
sbi-r.1	8084956	galactinol synthase 2
sbi-r.1	8081053	galactinol synthase 2
bdi-r.1	100823302	galactinol synthase 1
bdi-r.1	100846042	galactinol synthase 2

Top 50 coexpressed genes to GOLS (gma-u.5 coexpression data)

KEGG ID	Pathway name	#genes in coex list	#genes in genome	-log10(p)	Link to the KEGG^* map (Multiple genes)

Top 50 enrichment test to GOLS (gma-u.5 coexpression data)

CoexMap"548050"

[Cytoscape]

Annotation

functional annotation

KEGG

gmx00052 [list] [network] Galactose metabolism (101 genes)

GO BP

GO CC

GO MF

GO:0016757 [list] [network] glycosyltransferase activity

(950 genes)

IEA

Protein

NP_001238027.2 [sequence] [blastp]

Subcellular
localization
wolf

chlo 3, cyto 3, nucl 1, mito 1, cyto_E.R. 1

(predict for NP_001238027.2)

Subcellular
localization
TargetP

other 8

(predict for NP_001238027.2)

Gene expression

All samples

[Expression pattern]

Tissue specificity^*

Coexpression

	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	Target			Reference
	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	gma-u.5 for GOLS	gma-r.7 for GOLS	gma-m.5 for GOLS	gma-u.5 for 100819991	gma-u.5 for 100792129	gma-u.5 for 100800249	mtr-u.5 for 11416931	mtr-u.5 for 11416930	mtr-u.5 for 11433093	ppo-u.5 for 7455409	ppo-u.5 for 7471087	ppo-u.5 for 7492393	ath-u.5 for GolS4	ath-u.5 for GolS1	ath-u.5 for GolS3	bra-r.6 for 103838508	bra-r.6 for 103838671	bra-r.6 for 103866399	vvi-u.5 for 100254435	vvi-u.5 for 100255485	vvi-u.5 for 100257918	ghi-r.1 for 107893739	ghi-r.1 for 107912304	ghi-r.1 for 107920315	bna-r.1 for 106396142	bna-r.1 for 106377002	bna-r.1 for 106379755	cit-r.1 for 102608882	cit-r.1 for 102619819	sly-u.5 for 101244339	sly-u.5 for 101261450	sly-u.5 for GolS2	sot-r.1 for 102591561	sot-r.1 for 102589277	sot-r.1 for 102592897	nta-r.1 for 107783847	nta-r.1 for 107763259	nta-r.1 for 107794006	osa-u.5 for 4332654	osa-u.5 for 4344351	zma-u.5 for 606403	zma-u.5 for 606405	tae-r.2 for 123048636	tae-r.2 for 123040542	tae-r.2 for 123043587	hvu-r.1 for 123424659	hvu-r.1 for 123429407	hvu-r.1 for 123446536	sbi-r.1 for 8084956	sbi-r.1 for 8081053	bdi-r.1 for 100823302	bdi-r.1 for 100846042

Ortholog

Ortholog ID: 933

Species

gma

mtr

ppo

ath

bra

vvi

ghi

bna

cit

sly

sot

nta

osa

zma

tae

hvu

sbi

bdi

Symbol

GolS4

GolS3

GolS2

GolS2

Function^*

galactinol synthase 1

galactinol synthase 2

galactinol synthase 1

galactinol synthase 2

galactinol synthase 1

galactinol synthase 2

galactinol synthase 4

galactinol synthase 3

galactinol synthase 2

galactinol synthase 4

galactinol synthase 1

galactinol synthase 2

galactinol synthase 3

galactinol synthase 1-like

galactinol synthase 1

galactinol synthase 2-like

galactinol synthase 1

galactinol synthase 2-like

galactinol synthase 1

galactinol synthase

galactinol synthase 1

galactinol synthase 2

galactinol synthase 2-like

galactinol synthase 2

galactinol synthase 1-like

galactinol synthase 2-like

galactinol synthase 1

galactinol synthase 2

galactinol synthase 1

galactinol synthase 2

galactinol synthase 2-like

galactinol synthase 2

galactinol synthase 1

galactinol synthase 2

Coexmap

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Coexpression

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KEGG Info

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma04141	Protein processing in endoplasmic reticulum	6
gma00052	Galactose metabolism	2
gma03410	Base excision repair	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma00052	Galactose metabolism	6
gma04146	Peroxisome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma00052	Galactose metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
mtr00052	Galactose metabolism	5

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
mtr00052	Galactose metabolism	5
mtr00941	Flavonoid biosynthesis	3
mtr00944	Flavone and flavonol biosynthesis	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
mtr04141	Protein processing in endoplasmic reticulum	14
mtr03040	Spliceosome	3
mtr04144	Endocytosis	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ppo00910	Nitrogen metabolism	2
ppo01310	Nitrogen cycle	2
ppo00500	Starch and sucrose metabolism	2
ppo01200	Carbon metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ppo04075	Plant hormone signal transduction	8
ppo04016	MAPK signaling pathway - plant	5
ppo00052	Galactose metabolism	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ath00940	Phenylpropanoid biosynthesis	4
ath00460	Cyanoamino acid metabolism	3
ath00500	Starch and sucrose metabolism	3
ath00999	Biosynthesis of various plant secondary metabolites	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ath00052	Galactose metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ath04016	MAPK signaling pathway - plant	5
ath04075	Plant hormone signal transduction	5

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bra04141	Protein processing in endoplasmic reticulum	8
bra03040	Spliceosome	3
bra00052	Galactose metabolism	2
bra04144	Endocytosis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bra04141	Protein processing in endoplasmic reticulum	9

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
vvi04016	MAPK signaling pathway - plant	4
vvi00906	Carotenoid biosynthesis	4
vvi04075	Plant hormone signal transduction	3
vvi00052	Galactose metabolism	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
vvi00052	Galactose metabolism	3
vvi00906	Carotenoid biosynthesis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
vvi00052	Galactose metabolism	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi00350	Tyrosine metabolism	2
ghi00950	Isoquinoline alkaloid biosynthesis	2
ghi00052	Galactose metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi00052	Galactose metabolism	7

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi00052	Galactose metabolism	7

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bna04712	Circadian rhythm - plant	3
bna00052	Galactose metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bna00052	Galactose metabolism	4

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bna00052	Galactose metabolism	4

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
cit03018	RNA degradation	3
cit04141	Protein processing in endoplasmic reticulum	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sly00052	Galactose metabolism	3
sly00940	Phenylpropanoid biosynthesis	2
sly04075	Plant hormone signal transduction	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sly04141	Protein processing in endoplasmic reticulum	6

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sly04075	Plant hormone signal transduction	4
sly00052	Galactose metabolism	4
sly04016	MAPK signaling pathway - plant	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sot04141	Protein processing in endoplasmic reticulum	4

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sot00052	Galactose metabolism	5

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sot00052	Galactose metabolism	5

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta00052	Galactose metabolism	6

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta04141	Protein processing in endoplasmic reticulum	8
nta00052	Galactose metabolism	3
nta03040	Spliceosome	2
nta04144	Endocytosis	2
nta00230	Purine metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta00052	Galactose metabolism	6
nta04712	Circadian rhythm - plant	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
osa00052	Galactose metabolism	4
osa04075	Plant hormone signal transduction	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
osa04075	Plant hormone signal transduction	4
osa00052	Galactose metabolism	3
osa04016	MAPK signaling pathway - plant	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
zma00052	Galactose metabolism	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
zma00052	Galactose metabolism	3
zma04075	Plant hormone signal transduction	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae00052	Galactose metabolism	13

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae00052	Galactose metabolism	12

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
hvu00052	Galactose metabolism	4

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
hvu00052	Galactose metabolism	4

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
hvu00052	Galactose metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sbi00052	Galactose metabolism	4
sbi01200	Carbon metabolism	2
sbi00402	Benzoxazinoid biosynthesis	2
sbi00999	Biosynthesis of various plant secondary metabolites	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sbi04141	Protein processing in endoplasmic reticulum	8
sbi00052	Galactose metabolism	4

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bdi00052	Galactose metabolism	2

Expression

Expression pattern

Entrez Gene ID^*

100819991

100792129

100809287

11416931

11416930

11433093

7492393

7473221

7465228

842342

837457

842114

103838508

103866399

103843850

100257918

100261424

100260126

107931433

107933752

107893295

106377002

106392335

106436392

102628674

102616851

101244339

101261450

100316891

102591561

102589277

102592897

107763259

107794006

107814672

4332654

4344351

606403

606405

123043587

123184669

123424659

123429407

123446536

8084956

8081053

100823302

100846042

The preparation time of this page was 0.3 [sec].


Species	gma	mtr	ppo	ath	bra	vvi	ghi	bna	cit	sly	sot	nta	osa	zma	tae	hvu	sbi	bdi	cre
Paralog	6	3	3	3	3	3	3	3	2	3	3	3	2	2	3	3	2	2	0

Select Species**

Orthologous genes in OrthoFinder**

Top 50 coexpressed genes to GOLS (gma-u.5 coexpression data)

Top 50 enrichment test to GOLS (gma-u.5 coexpression data)

Select Species^**

Orthologous genes in OrthoFinder^**