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Orthologous genes in OrthoFinder**

Species Gene Description
 gma-u.5   PUR1   glutamine phosphoribosylpyrophosphate amidotransferase 
 gma-r.7   PUR1   glutamine phosphoribosylpyrophosphate amidotransferase 
 gma-m.5   PUR1   glutamine phosphoribosylpyrophosphate amidotransferase 
 gma-u.5   100797730   amidophosphoribosyltransferase, chloroplastic 
 gma-u.5   100791919   amidophosphoribosyltransferase, chloroplastic 
 gma-u.5   100801720   amidophosphoribosyltransferase 1 
 mtr-u.5   11438087   amidophosphoribosyltransferase, chloroplastic 
 ppo-u.5   7494291   amidophosphoribosyltransferase, chloroplastic 
 ppo-u.5   18097889   amidophosphoribosyltransferase, chloroplastic 
 ath-u.5   ASE1   GLN phosphoribosyl pyrophosphate amidotransferase 1 
 ath-u.5   ASE2   GLN phosphoribosyl pyrophosphate amidotransferase 2 
 vvi-u.5   100250446   amidophosphoribosyltransferase, chloroplastic 
 sly-u.5   101250934   amidophosphoribosyltransferase, chloroplastic 
 osa-u.5   4324764   amidophosphoribosyltransferase, chloroplastic 
 osa-u.5   4338879   amidophosphoribosyltransferase, chloroplastic 
 zma-u.5   100281060   amidophosphoribosyltransferase 
 zma-u.5   103630426   amidophosphoribosyltransferase, chloroplastic-like 
 zma-u.5   103635621   amidophosphoribosyltransferase, chloroplastic-like 

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Top 50 coexpressed genes to PUR1 (gma-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to PUR1 (gma-u.5 coexpression data)

CoexMap"548065"


gmaPUR1 | Entrez gene ID : 548065      
Species gma mtr ppo ath vvi sly osa zma sbi nta bra cre hvu cit bdi sot tae bna ghi
Paralog 6 1 2 2 1 1 2 3 0 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG gmx00230 [list] [network] Purine metabolism (174 genes)
gmx00250 [list] [network] Alanine, aspartate and glutamate metabolism (92 genes)
GO BP
GO:0009113 [list] [network] purine nucleobase biosynthetic process  (19 genes)  IEA  
GO:0006164 [list] [network] purine nucleotide biosynthetic process  (106 genes)  IEA  
GO CC
GO:0005737 [list] [network] cytoplasm  (9233 genes)  IEA  
GO MF
GO:0004044 [list] [network] amidophosphoribosyltransferase activity  (4 genes)  IEA  
Protein NP_001238270.2 [sequence] [blastp]
Subcellular
localization
wolf
chlo 10  (predict for NP_001238270.2)
Subcellular
localization
TargetP
chlo 9  (predict for NP_001238270.2)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

gma-u.5
for
PUR1

.
gma-r.7
for
PUR1

.
gma-m.5
for
PUR1

.
gma-u.5
for
100797730

.
gma-u.5
for
100791919

.
gma-u.5
for
100801720

.
mtr-u.5
for
11438087

.
ppo-u.5
for
7494291

.
ppo-u.5
for
18097889

.
ath-u.5
for
ASE1

.
ath-u.5
for
ASE2

.
vvi-u.5
for
100250446

.
sly-u.5
for
101250934

.
osa-u.5
for
4324764

.
osa-u.5
for
4338879

.
zma-u.5
for
100281060

.
zma-u.5
for
103630426

.
zma-u.5
for
103635621

.


Ortholog ID: 3192
Species ath gma gma sly osa osa zma zma bra vvi ppo ppo mtr tae tae hvu hvu ghi ghi bna bna cre sbi sbi sot cit bdi bdi nta nta
Symbol ASE1 LOC100797730 LOC100791919 LOC101250934 LOC4324764 LOC4338879 LOC103630426 LOC103635621 LOC103834893 LOC100250446 LOC7494291 LOC18097889 LOC11438087 LOC123182123 LOC123071583 LOC123444768 LOC123446421 LOC107902025 LOC107927942 LOC111213077 LOC106352666 CHLRE_05g234638v5 LOC8060995 LOC8058504 LOC102598888 LOC102622004 LOC100841735 LOC100836433 LOC107782151 LOC107793733
Function* GLN phosphoribosyl pyrophosphate amidotransferase 1 amidophosphoribosyltransferase, chloroplastic amidophosphoribosyltransferase, chloroplastic amidophosphoribosyltransferase, chloroplastic amidophosphoribosyltransferase, chloroplastic amidophosphoribosyltransferase, chloroplastic amidophosphoribosyltransferase, chloroplastic-like amidophosphoribosyltransferase, chloroplastic-like amidophosphoribosyltransferase 2, chloroplastic amidophosphoribosyltransferase, chloroplastic amidophosphoribosyltransferase, chloroplastic amidophosphoribosyltransferase, chloroplastic amidophosphoribosyltransferase, chloroplastic amidophosphoribosyltransferase, chloroplastic amidophosphoribosyltransferase, chloroplastic amidophosphoribosyltransferase, chloroplastic-like amidophosphoribosyltransferase, chloroplastic-like amidophosphoribosyltransferase, chloroplastic amidophosphoribosyltransferase, chloroplastic amidophosphoribosyltransferase 1, chloroplastic-like amidophosphoribosyltransferase 2, chloroplastic uncharacterized protein amidophosphoribosyltransferase, chloroplastic amidophosphoribosyltransferase, chloroplastic amidophosphoribosyltransferase, chloroplastic-like amidophosphoribosyltransferase, chloroplastic-like amidophosphoribosyltransferase, chloroplastic amidophosphoribosyltransferase, chloroplastic amidophosphoribosyltransferase, chloroplastic amidophosphoribosyltransferase, chloroplastic-like
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath04075 Plant hormone signal transduction 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma00230 Purine metabolism 6
gma00250 Alanine, aspartate and glutamate metabolism 4
gma00260 Glycine, serine and threonine metabolism 2
gma01230 Biosynthesis of amino acids 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma00230 Purine metabolism 6
gma00250 Alanine, aspartate and glutamate metabolism 4
gma00260 Glycine, serine and threonine metabolism 3
gma01230 Biosynthesis of amino acids 3
gma00943 Isoflavonoid biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03010 Ribosome 3
sly04626 Plant-pathogen interaction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa00750 Vitamin B6 metabolism 2
osa01240 Biosynthesis of cofactors 2
osa00650 Butanoate metabolism 2
osa01230 Biosynthesis of amino acids 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa00230 Purine metabolism 3
osa01210 2-Oxocarboxylic acid metabolism 2
osa01230 Biosynthesis of amino acids 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03010 Ribosome 4
zma00230 Purine metabolism 2
zma00250 Alanine, aspartate and glutamate metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03010 Ribosome 4
zma03040 Spliceosome 3
zma00230 Purine metabolism 2
zma00250 Alanine, aspartate and glutamate metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03008 Ribosome biogenesis in eukaryotes 3
bra00030 Pentose phosphate pathway 2
bra00710 Carbon fixation by Calvin cycle 2
bra01200 Carbon metabolism 2
bra01230 Biosynthesis of amino acids 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi00710 Carbon fixation by Calvin cycle 3
vvi01200 Carbon metabolism 3
vvi00190 Oxidative phosphorylation 2
vvi00195 Photosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo01240 Biosynthesis of cofactors 7
ppo00250 Alanine, aspartate and glutamate metabolism 2
ppo00790 Folate biosynthesis 2
ppo00760 Nicotinate and nicotinamide metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03013 Nucleocytoplasmic transport 2
ppo03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr01240 Biosynthesis of cofactors 6
mtr00250 Alanine, aspartate and glutamate metabolism 5
mtr00230 Purine metabolism 4
mtr00240 Pyrimidine metabolism 3
mtr01230 Biosynthesis of amino acids 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03010 Ribosome 9
tae00230 Purine metabolism 4
tae00250 Alanine, aspartate and glutamate metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00230 Purine metabolism 3
tae00250 Alanine, aspartate and glutamate metabolism 3
tae00270 Cysteine and methionine metabolism 2
tae00543 Exopolysaccharide biosynthesis 2
tae00920 Sulfur metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03008 Ribosome biogenesis in eukaryotes 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00750 Vitamin B6 metabolism 6
ghi01240 Biosynthesis of cofactors 6
ghi03008 Ribosome biogenesis in eukaryotes 4
ghi00230 Purine metabolism 3
ghi00250 Alanine, aspartate and glutamate metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00750 Vitamin B6 metabolism 6
ghi01240 Biosynthesis of cofactors 6
ghi00230 Purine metabolism 3
ghi00250 Alanine, aspartate and glutamate metabolism 3
ghi03008 Ribosome biogenesis in eukaryotes 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00260 Glycine, serine and threonine metabolism 6
bna00750 Vitamin B6 metabolism 6
bna01230 Biosynthesis of amino acids 6
bna00230 Purine metabolism 4
bna00250 Alanine, aspartate and glutamate metabolism 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna01230 Biosynthesis of amino acids 8
bna00260 Glycine, serine and threonine metabolism 6
bna00750 Vitamin B6 metabolism 6
bna00230 Purine metabolism 4
bna00250 Alanine, aspartate and glutamate metabolism 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cre00230 Purine metabolism 7
cre01230 Biosynthesis of amino acids 4
cre01232 Nucleotide metabolism 3
cre00630 Glyoxylate and dicarboxylate metabolism 3
cre00220 Arginine biosynthesis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03010 Ribosome 2
sbi00230 Purine metabolism 2
sbi00250 Alanine, aspartate and glutamate metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03010 Ribosome 10
sbi00230 Purine metabolism 2
sbi00250 Alanine, aspartate and glutamate metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot00030 Pentose phosphate pathway 2
sot00710 Carbon fixation by Calvin cycle 2
sot01200 Carbon metabolism 2
sot01230 Biosynthesis of amino acids 2
sot03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03040 Spliceosome 2
cit03010 Ribosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03010 Ribosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi00910 Nitrogen metabolism 3
bdi01310 Nitrogen cycle 3
bdi00195 Photosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00230 Purine metabolism 4
nta00250 Alanine, aspartate and glutamate metabolism 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00230 Purine metabolism 4
nta00250 Alanine, aspartate and glutamate metabolism 4
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 816156 100797730 100791919 101250934 4324764 4338879 103630426 103635621 103834893 100250446 7494291 18097889 11438087 123182123 123071583 123444768 123446421 107902025 107927942 111213077 106352666 5726204 8060995 8058504 102598888 102622004 100841735 100836433 107782151 107793733
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