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Orthologous genes in OrthoFinder**

Species Gene Description
 cre-r.1   CHLRE_01g030450v5   uncharacterized protein 
 ath-u.5   UBP26   ubiquitin-specific protease 26 
 gma-u.5   100815770   ubiquitin carboxyl-terminal hydrolase 26 
 gma-u.5   100814430   ubiquitin carboxyl-terminal hydrolase 26 
 gma-u.5   100795556   ubiquitin carboxyl-terminal hydrolase 26 
 sly-u.5   101264903   ubiquitin carboxyl-terminal hydrolase 26 
 osa-u.5   4331918   ubiquitin carboxyl-terminal hydrolase 26-like 
 zma-u.5   100216580   uncharacterized LOC100216580 
 zma-u.5   100285328   UBP26 
 vvi-u.5   100259355   ubiquitin carboxyl-terminal hydrolase 26 
 ppo-u.5   7466456   ubiquitin carboxyl-terminal hydrolase 26 
 ppo-u.5   7460962   ubiquitin carboxyl-terminal hydrolase 26 
 mtr-u.5   25481892   ubiquitin carboxyl-terminal hydrolase 26 
 mtr-u.5   11435462   ubiquitin carboxyl-terminal hydrolase 26 

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Top 50 coexpressed genes to CHLRE_01g030450v5 (cre-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to CHLRE_01g030450v5 (cre-r.1 coexpression data)

CoexMap"5715367"


creCHLRE_01g030450v5 | Entrez gene ID : 5715367    
Species cre ath gma sly osa zma vvi ppo mtr sbi nta bra hvu cit bdi sot tae bna ghi
Paralog 1 1 3 1 1 2 1 2 2 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0016579 [list] [network] protein deubiquitination  (65 genes)  IEA  
GO CC
GO:0005829 [list] [network] cytosol  (481 genes)  IEA  
GO:0005634 [list] [network] nucleus  (1576 genes)  IEA  
GO MF
GO:0004197 [list] [network] cysteine-type endopeptidase activity  (36 genes)  IEA  
GO:0004843 [list] [network] cysteine-type deubiquitinase activity  (41 genes)  IEA  
Protein XP_042928543.1 [sequence] [blastp]
Subcellular
localization
wolf
cyto 6,  chlo 3,  cyto_pero 3,  cyto_E.R. 3,  cyto_plas 3  (predict for XP_042928543.1)
Subcellular
localization
TargetP
other 7  (predict for XP_042928543.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

cre-r.1
for
CHLRE_01g030450v5

.
ath-u.5
for
UBP26

.
gma-u.5
for
100815770

.
gma-u.5
for
100814430

.
gma-u.5
for
100795556

.
sly-u.5
for
101264903

.
osa-u.5
for
4331918

.
zma-u.5
for
100216580

.
zma-u.5
for
100285328

.
vvi-u.5
for
100259355

.
ppo-u.5
for
7466456

.
ppo-u.5
for
7460962

.
mtr-u.5
for
25481892

.
mtr-u.5
for
11435462

.


Ortholog ID: 6894
Species ath gma gma sly osa zma zma bra bra vvi ppo ppo mtr mtr tae tae hvu ghi ghi bna bna cre sbi sot cit bdi nta nta
Symbol UBP26 LOC100814430 LOC100815770 LOC101264903 LOC4331918 LOC100216580 LOC100285328 LOC103873045 LOC103873478 LOC100259355 LOC7460962 LOC7466456 LOC25481892 LOC11435462 LOC123098427 LOC123084929 LOC123449452 LOC107888369 LOC107893490 LOC106347778 LOC106416953 CHLRE_01g030450v5 LOC8063269 LOC102585292 LOC102606664 LOC100842178 LOC107807370 LOC107792534
Function* ubiquitin-specific protease 26 ubiquitin carboxyl-terminal hydrolase 26 ubiquitin carboxyl-terminal hydrolase 26 ubiquitin carboxyl-terminal hydrolase 26 ubiquitin carboxyl-terminal hydrolase 26-like uncharacterized LOC100216580 UBP26 ubiquitin carboxyl-terminal hydrolase 26 ubiquitin carboxyl-terminal hydrolase 26 ubiquitin carboxyl-terminal hydrolase 26 ubiquitin carboxyl-terminal hydrolase 26 ubiquitin carboxyl-terminal hydrolase 26 ubiquitin carboxyl-terminal hydrolase 26 ubiquitin carboxyl-terminal hydrolase 26 ubiquitin carboxyl-terminal hydrolase 26 ubiquitin carboxyl-terminal hydrolase 26 ubiquitin carboxyl-terminal hydrolase 26 ubiquitin carboxyl-terminal hydrolase 26 ubiquitin carboxyl-terminal hydrolase 26 ubiquitin carboxyl-terminal hydrolase 26 ubiquitin carboxyl-terminal hydrolase 26-like uncharacterized protein ubiquitin carboxyl-terminal hydrolase 26 ubiquitin carboxyl-terminal hydrolase 26 ubiquitin carboxyl-terminal hydrolase 26 ubiquitin carboxyl-terminal hydrolase 26 ubiquitin carboxyl-terminal hydrolase 26 ubiquitin carboxyl-terminal hydrolase 26
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma00562 Inositol phosphate metabolism 2
gma04070 Phosphatidylinositol signaling system 2
gma04145 Phagosome 2
gma00500 Starch and sucrose metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03082 ATP-dependent chromatin remodeling 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03018 RNA degradation 3
ppo03082 ATP-dependent chromatin remodeling 2
ppo03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03013 Nucleocytoplasmic transport 2
hvu03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03083 Polycomb repressive complex 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03083 Polycomb repressive complex 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cre03040 Spliceosome 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03030 DNA replication 2
sbi03410 Base excision repair 2
sbi03420 Nucleotide excision repair 2
sbi03430 Mismatch repair 2
sbi04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit04120 Ubiquitin mediated proteolysis 3
cit03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03040 Spliceosome 4
bdi03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta04148 Efferocytosis 2
nta04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta04148 Efferocytosis 2
nta04120 Ubiquitin mediated proteolysis 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 824122 100814430 100815770 101264903 4331918 100216580 100285328 103873045 103873478 100259355 7460962 7466456 25481892 11435462 123098427 123084929 123449452 107888369 107893490 106347778 106416953 5715367 8063269 102585292 102606664 100842178 107807370 107792534
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