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Orthologous genes in OrthoFinder**

Species Gene Description
 cre-r.1   CHLRE_01g040350v5   uncharacterized protein 
 ath-u.5   AT5G54090   DNA mismatch repair protein MutS, type 2 
 gma-u.5   100791225   endonuclease MutS2 
 sly-u.5   101255670   uncharacterized LOC101255670 
 osa-u.5   4349080   uncharacterized LOC4349080 
 zma-u.5   100382240   uncharacterized LOC100382240 
 vvi-u.5   100241843   uncharacterized LOC100241843 
 ppo-u.5   7493474   uncharacterized LOC7493474 
 mtr-u.5   11405423   endonuclease MutS2 

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Top 50 coexpressed genes to CHLRE_01g040350v5 (cre-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to CHLRE_01g040350v5 (cre-r.1 coexpression data)

CoexMap"5715553"


creCHLRE_01g040350v5 | Entrez gene ID : 5715553      
Species cre ath gma sly osa zma vvi ppo mtr bdi hvu bra cit bna sbi ghi sot nta tae
Paralog 1 1 1 1 1 1 1 1 1 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0006298 [list] [network] mismatch repair  (17 genes)  IEA  
GO CC
GO:0005634 [list] [network] nucleus  (1576 genes)  IEA  
GO MF
GO:0030983 [list] [network] mismatched DNA binding  (13 genes)  IEA  
GO:0140664 [list] [network] ATP-dependent DNA damage sensor activity  (19 genes)  IEA  
GO:0005524 [list] [network] ATP binding  (1223 genes)  IEA  
Protein XP_042928698.1 [sequence] [blastp]
Subcellular
localization
wolf
nucl 6,  nucl_plas 4,  plas 1,  chlo 1,  cyto 1,  mito 1,  golg 1,  chlo_mito 1  (predict for XP_042928698.1)
Subcellular
localization
TargetP
mito 5,  other 4  (predict for XP_042928698.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

cre-r.1
for
CHLRE_01g040350v5
ath-u.5
for
AT5G54090
gma-u.5
for
100791225
sly-u.5
for
101255670
osa-u.5
for
4349080
zma-u.5
for
100382240
vvi-u.5
for
100241843
ppo-u.5
for
7493474
mtr-u.5
for
11405423


Ortholog ID: 10395
Species cre ath gma sly osa zma bra vvi ppo mtr tae tae hvu ghi ghi bna bna sbi sot cit bdi nta nta
Symbol CHLRE_01g040350v5 AT5G54090 LOC100791225 LOC101255670 LOC4349080 LOC100382240 LOC103851994 LOC100241843 LOC7493474 LOC11405423 LOC123048714 LOC123124641 LOC123434507 LOC107917901 LOC107929573 LOC106380943 LOC106390236 LOC8065183 LOC102596319 LOC102631445 LOC100829925 LOC107826629 LOC107776753
Function* uncharacterized protein DNA mismatch repair protein MutS, type 2 endonuclease MutS2 uncharacterized LOC101255670 uncharacterized LOC4349080 uncharacterized LOC100382240 endonuclease MutS2 uncharacterized LOC100241843 uncharacterized LOC7493474 endonuclease MutS2 endonuclease MutS2 endonuclease MutS2 endonuclease MutS2 endonuclease MutS2 endonuclease MutS2 endonuclease MutS2 endonuclease MutS2-like endonuclease MutS2 endonuclease MutS2 uncharacterized LOC102631445 endonuclease MutS2 uncharacterized LOC107826629 uncharacterized LOC107776753
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly00230 Purine metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03010 Ribosome 2
bra04146 Peroxisome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi00790 Folate biosynthesis 2
vvi01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo00500 Starch and sucrose metabolism 3
ppo00906 Carotenoid biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00500 Starch and sucrose metabolism 3
tae00010 Glycolysis / Gluconeogenesis 2
tae00710 Carbon fixation by Calvin cycle 2
tae01200 Carbon metabolism 2
tae01230 Biosynthesis of amino acids 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00130 Ubiquinone and other terpenoid-quinone biosynthesis 2
ghi01240 Biosynthesis of cofactors 2
ghi00970 Aminoacyl-tRNA biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00130 Ubiquinone and other terpenoid-quinone biosynthesis 2
ghi01240 Biosynthesis of cofactors 2
ghi00970 Aminoacyl-tRNA biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00970 Aminoacyl-tRNA biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00970 Aminoacyl-tRNA biosynthesis 2
bna04146 Peroxisome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot00970 Aminoacyl-tRNA biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi00970 Aminoacyl-tRNA biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00010 Glycolysis / Gluconeogenesis 2
nta00710 Carbon fixation by Calvin cycle 2
nta01200 Carbon metabolism 2
nta01230 Biosynthesis of amino acids 2
nta03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00010 Glycolysis / Gluconeogenesis 2
nta00710 Carbon fixation by Calvin cycle 2
nta01200 Carbon metabolism 2
nta01230 Biosynthesis of amino acids 2
nta03015 mRNA surveillance pathway 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 5715553 835495 100791225 101255670 4349080 100382240 103851994 100241843 7493474 11405423 123048714 123124641 123434507 107917901 107929573 106380943 106390236 8065183 102596319 102631445 100829925 107826629 107776753
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