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Orthologous genes in OrthoFinder**

Species Gene Description
 cre-r.1   CHLRE_14g620150v5   uncharacterized protein 
 ath-u.5   AT3G27110   Peptidase family M48 family protein 
 gma-u.5   100776801   protease HtpX homolog 
 sly-u.5   101249793   plastoglobule-localized metallopeptidase 48, chloroplastic 
 osa-u.5   4323840   plastoglobule-localized metallopeptidase 48, chloroplastic 
 zma-u.5   100191294   putative peptidase M48 family protein 
 vvi-u.5   100263426   plastoglobule-localized metallopeptidase 48, chloroplastic 
 ppo-u.5   7456230   plastoglobule-localized metallopeptidase 48, chloroplastic 
 mtr-u.5   25497914   uncharacterized LOC25497914 

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Top 50 coexpressed genes to CHLRE_14g620150v5 (cre-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to CHLRE_14g620150v5 (cre-r.1 coexpression data)

CoexMap"5715883"


creCHLRE_14g620150v5 | Entrez gene ID : 5715883    
Species cre ath gma sly osa zma vvi ppo mtr sbi nta bra hvu cit bdi sot tae bna ghi
Paralog 1 1 1 1 1 1 1 1 1 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0071586 [list] [network] CAAX-box protein processing  (9 genes)  IEA  
GO CC
GO:0005789 [list] [network] endoplasmic reticulum membrane  (120 genes)  IEA  
GO MF
GO:0004222 [list] [network] metalloendopeptidase activity  (42 genes)  IEA  
Protein XP_001689847.2 [sequence] [blastp]
Subcellular
localization
wolf
chlo 8,  mito 2  (predict for XP_001689847.2)
Subcellular
localization
TargetP
mito 9  (predict for XP_001689847.2)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

cre-r.1
for
CHLRE_14g620150v5

.
ath-u.5
for
AT3G27110

.
gma-u.5
for
100776801

.
sly-u.5
for
101249793

.
osa-u.5
for
4323840

.
zma-u.5
for
100191294

.
vvi-u.5
for
100263426

.
ppo-u.5
for
7456230

.
mtr-u.5
for
25497914

.


Ortholog ID: 9514
Species ath gma sly osa zma bra vvi ppo mtr tae tae hvu ghi ghi bna bna cre sbi sot cit bdi nta nta
Symbol AT3G27110 LOC100776801 LOC101249793 LOC4323840 LOC100191294 LOC103875247 LOC100263426 LOC7456230 LOC25497914 LOC123068718 LOC123077223 LOC123442757 LOC107904818 LOC107911756 LOC106376964 LOC106349283 CHLRE_14g620150v5 LOC8085061 LOC102585296 LOC102607506 LOC100839697 LOC107789950 LOC107764622
Function* Peptidase family M48 family protein protease HtpX homolog plastoglobule-localized metallopeptidase 48, chloroplastic plastoglobule-localized metallopeptidase 48, chloroplastic putative peptidase M48 family protein protease HtpX plastoglobule-localized metallopeptidase 48, chloroplastic plastoglobule-localized metallopeptidase 48, chloroplastic uncharacterized LOC25497914 protease HtpX homolog uncharacterized LOC123077223 uncharacterized LOC123442757 protease HtpX uncharacterized LOC107911756 protease HtpX homolog protease HtpX-like uncharacterized protein uncharacterized LOC8085061 uncharacterized LOC102585296 plastoglobule-localized metallopeptidase 48, chloroplastic uncharacterized LOC100839697 plastoglobule-localized metallopeptidase 48, chloroplastic plastoglobule-localized metallopeptidase 48, chloroplastic
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly00860 Porphyrin metabolism 3
sly03060 Protein export 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo00380 Tryptophan metabolism 2
ppo00630 Glyoxylate and dicarboxylate metabolism 2
ppo01200 Carbon metabolism 2
ppo04016 MAPK signaling pathway - plant 2
ppo04146 Peroxisome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00906 Carotenoid biosynthesis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu00500 Starch and sucrose metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi04081 Hormone signaling 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi04081 Hormone signaling 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00380 Tryptophan metabolism 5
bna00630 Glyoxylate and dicarboxylate metabolism 5
bna01200 Carbon metabolism 5
bna04016 MAPK signaling pathway - plant 5
bna04146 Peroxisome 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00380 Tryptophan metabolism 5
bna00630 Glyoxylate and dicarboxylate metabolism 5
bna01200 Carbon metabolism 5
bna04016 MAPK signaling pathway - plant 5
bna04146 Peroxisome 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cre04136 Autophagy - other 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00906 Carotenoid biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00906 Carotenoid biosynthesis 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 822330 100776801 101249793 4323840 100191294 103875247 100263426 7456230 25497914 123068718 123077223 123442757 107904818 107911756 106376964 106349283 5715883 8085061 102585296 102607506 100839697 107789950 107764622
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