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Orthologous genes in OrthoFinder**

Species Gene Description
 cre-r.1   CHLRE_10g442250v5   uncharacterized protein 
 ath-u.5   AT5G06350   ARM repeat superfamily protein 
 gma-u.5   100796115   uncharacterized LOC100796115 
 gma-u.5   100775525   uncharacterized LOC100775525 
 sly-u.5   101261149   uncharacterized LOC101261149 
 osa-u.5   4336098   uncharacterized LOC4336098 
 zma-u.5   103646346   ARM repeat superfamily protein 
 vvi-u.5   100242503   uncharacterized LOC100242503 
 ppo-u.5   18094901   uncharacterized LOC18094901 
 ppo-u.5   7471888   uncharacterized LOC7471888 
 mtr-u.5   25499481   testis-expressed protein 10 homolog 

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Top 50 coexpressed genes to CHLRE_10g442250v5 (cre-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to CHLRE_10g442250v5 (cre-r.1 coexpression data)

CoexMap"5715976"


creCHLRE_10g442250v5 | Entrez gene ID : 5715976      
Species cre ath gma sly osa zma vvi ppo mtr sbi nta bra hvu cit bdi sot tae bna ghi
Paralog 1 1 2 1 1 1 1 2 1 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG cre03083 [list] [network] Polycomb repressive complex (13 genes)
GO BP
GO CC
GO:0005634 [list] [network] nucleus  (1576 genes)  IEA  
GO MF
Protein XP_042920210.1 [sequence] [blastp]
Subcellular
localization
wolf
chlo 4,  nucl 1,  golg 1,  cyto 1,  plas 1,  vacu 1,  pero 1,  cysk_nucl 1,  cyto_pero 1,  cyto_plas 1  (predict for XP_042920210.1)
Subcellular
localization
TargetP
other 8  (predict for XP_042920210.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

cre-r.1
for
CHLRE_10g442250v5

.
ath-u.5
for
AT5G06350

.
gma-u.5
for
100796115

.
gma-u.5
for
100775525

.
sly-u.5
for
101261149

.
osa-u.5
for
4336098

.
zma-u.5
for
103646346

.
vvi-u.5
for
100242503

.
ppo-u.5
for
18094901

.
ppo-u.5
for
7471888

.
mtr-u.5
for
25499481

.


Ortholog ID: 7639
Species ath gma gma sly osa zma bra vvi ppo ppo mtr tae tae hvu ghi ghi bna bna cre sbi sot cit bdi nta nta
Symbol AT5G06350 LOC100775525 LOC100796115 LOC101261149 LOC4336098 LOC103646346 LOC103846975 LOC100242503 LOC7471888 LOC18094901 LOC25499481 LOC123053580 LOC123045709 LOC123426959 LOC107889440 LOC107891183 LOC125579095 BNAC09G49190D CHLRE_10g442250v5 LOC8073558 LOC102580073 LOC102624133 LOC100830995 LOC107792484 LOC107810706
Function* ARM repeat superfamily protein uncharacterized LOC100775525 uncharacterized LOC100796115 uncharacterized LOC101261149 uncharacterized LOC4336098 ARM repeat superfamily protein uncharacterized LOC103846975 uncharacterized LOC100242503 uncharacterized LOC7471888 uncharacterized LOC18094901 testis-expressed protein 10 homolog uncharacterized LOC123053580 uncharacterized LOC123045709 uncharacterized LOC123426959 uncharacterized LOC107889440 uncharacterized LOC107891183 uncharacterized LOC125579095 uncharacterized BNAC09G49190D uncharacterized protein uncharacterized LOC8073558 testis-expressed sequence 10 protein homolog uncharacterized LOC102624133 uncharacterized LOC100830995 uncharacterized LOC107792484 uncharacterized LOC107810706
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03083 Polycomb repressive complex 3
gma00340 Histidine metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03008 Ribosome biogenesis in eukaryotes 2
gma03430 Mismatch repair 2
gma03040 Spliceosome 2
gma03083 Polycomb repressive complex 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03008 Ribosome biogenesis in eukaryotes 7
sly03020 RNA polymerase 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03008 Ribosome biogenesis in eukaryotes 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03008 Ribosome biogenesis in eukaryotes 7
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03040 Spliceosome 2
vvi03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03018 RNA degradation 2
ppo03083 Polycomb repressive complex 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03008 Ribosome biogenesis in eukaryotes 6
mtr03020 RNA polymerase 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03008 Ribosome biogenesis in eukaryotes 6
tae03083 Polycomb repressive complex 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03008 Ribosome biogenesis in eukaryotes 4
tae03083 Polycomb repressive complex 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03008 Ribosome biogenesis in eukaryotes 3
hvu03010 Ribosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03083 Polycomb repressive complex 2
ghi00270 Cysteine and methionine metabolism 2
ghi01230 Biosynthesis of amino acids 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03083 Polycomb repressive complex 2
ghi00270 Cysteine and methionine metabolism 2
ghi01230 Biosynthesis of amino acids 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03008 Ribosome biogenesis in eukaryotes 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03008 Ribosome biogenesis in eukaryotes 5
bna03018 RNA degradation 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03008 Ribosome biogenesis in eukaryotes 3
sbi03018 RNA degradation 2
sbi03460 Fanconi anemia pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03008 Ribosome biogenesis in eukaryotes 8
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit00564 Glycerophospholipid metabolism 2
cit00565 Ether lipid metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03013 Nucleocytoplasmic transport 4
bdi03020 RNA polymerase 3
bdi03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03008 Ribosome biogenesis in eukaryotes 4
nta03013 Nucleocytoplasmic transport 2
nta03250 Viral life cycle - HIV-1 2
nta03030 DNA replication 2
nta03410 Base excision repair 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03030 DNA replication 2
nta03410 Base excision repair 2
nta03420 Nucleotide excision repair 2
nta03430 Mismatch repair 2
nta03018 RNA degradation 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 830523 100775525 100796115 101261149 4336098 103646346 103846975 100242503 7471888 18094901 25499481 123053580 123045709 123426959 107889440 107891183 125579095 106388620 5715976 8073558 102580073 102624133 100830995 107792484 107810706
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