ATTED-II : GeneCoexpression result

Select Species^**

Orthologous genes in OrthoFinder^**

Species	Gene	Description
cre-r.1	CHLRE_06g277200v5	uncharacterized protein
ath-u.5	BIO1	adenosylmethionine-8-amino-7-oxononanoate transaminase
gma-u.5	100778549	bifunctional dethiobiotin synthetase/7,8-diamino-pelargonic acid aminotransferase, mitochondrial
sly-u.5	101244782	bifunctional dethiobiotin synthetase/7,8-diamino-pelargonic acid aminotransferase, mitochondrial-like
osa-u.5	4345056	bifunctional dethiobiotin synthetase/7,8-diamino-pelargonic acid aminotransferase, mitochondrial-like
zma-u.5	100382888	uncharacterized LOC100382888
bra-r.6	103856746	bifunctional dethiobiotin synthetase/7,8-diamino-pelargonic acid aminotransferase, mitochondrial
bra-r.6	103845194	bifunctional dethiobiotin synthetase/7,8-diamino-pelargonic acid aminotransferase, mitochondrial
vvi-u.5	100259784	bifunctional dethiobiotin synthetase/7,8-diamino-pelargonic acid aminotransferase, mitochondrial
ppo-u.5	18100519	bifunctional dethiobiotin synthetase/7,8-diamino-pelargonic acid aminotransferase, mitochondrial
mtr-u.5	11446047	bifunctional dethiobiotin synthetase/7,8-diamino-pelargonic acid aminotransferase, mitochondrial
tae-r.2	123144196	bifunctional dethiobiotin synthetase/7,8-diamino-pelargonic acid aminotransferase, mitochondrial
tae-r.2	123136715	bifunctional dethiobiotin synthetase/7,8-diamino-pelargonic acid aminotransferase, mitochondrial
tae-r.2	123132596	bifunctional dethiobiotin synthetase/7,8-diamino-pelargonic acid aminotransferase, mitochondrial
hvu-r.1	123401312	bifunctional dethiobiotin synthetase/7,8-diamino-pelargonic acid aminotransferase, mitochondrial
ghi-r.1	121212636	bifunctional dethiobiotin synthetase/7,8-diamino-pelargonic acid aminotransferase, mitochondrial
ghi-r.1	107944094	bifunctional dethiobiotin synthetase/7,8-diamino-pelargonic acid aminotransferase, mitochondrial
bna-r.1	106436665	bifunctional dethiobiotin synthetase/7,8-diamino-pelargonic acid aminotransferase, mitochondrial
bna-r.1	106402127	bifunctional dethiobiotin synthetase/7,8-diamino-pelargonic acid aminotransferase, mitochondrial
bna-r.1	106387199	bifunctional dethiobiotin synthetase/7,8-diamino-pelargonic acid aminotransferase, mitochondrial-like
sbi-r.1	8081870	bifunctional dethiobiotin synthetase/7,8-diamino-pelargonic acid aminotransferase, mitochondrial
sot-r.1	102579954	bifunctional dethiobiotin synthetase/7,8-diamino-pelargonic acid aminotransferase, mitochondrial
cit-r.1	102624762	bifunctional dethiobiotin synthetase/7,8-diamino-pelargonic acid aminotransferase, mitochondrial
bdi-r.1	100827183	bifunctional dethiobiotin synthetase/7,8-diamino-pelargonic acid aminotransferase, mitochondrial
nta-r.1	107788123	bifunctional dethiobiotin synthetase/7,8-diamino-pelargonic acid aminotransferase, mitochondrial
nta-r.1	107814376	bifunctional dethiobiotin synthetase/7,8-diamino-pelargonic acid aminotransferase, mitochondrial

Top 50 coexpressed genes to CHLRE_06g277200v5 (cre-r.1 coexpression data)

KEGG ID	Pathway name	#genes in coex list	#genes in genome	-log10(p)	Link to the KEGG^* map (Multiple genes)

Top 50 enrichment test to CHLRE_06g277200v5 (cre-r.1 coexpression data)

CoexMap"5716289"

[Cytoscape]

Annotation

functional annotation

KEGG

cre00780 [list] [network] Biotin metabolism (13 genes)

cre01240 [list] [network] Biosynthesis of cofactors (149 genes)

GO BP

GO:0009058 [list] [network] biosynthetic process

(1980 genes)

IEA

GO CC

GO MF

GO:0008483 [list] [network] transaminase activity	(24 genes)	IEA
GO:0030170 [list] [network] pyridoxal phosphate binding	(46 genes)	IEA

Protein

XP_042923738.1 [sequence] [blastp]

Subcellular
localization
wolf

chlo 9, mito 1

(predict for XP_042923738.1)

Subcellular
localization
TargetP

mito 7

(predict for XP_042923738.1)

Gene expression

All samples

[Expression pattern]

Tissue specificity^*

Coexpression

	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	Target	Reference
	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	cre-r.1 for CHLRE_06g277200v5	ath-u.5 for BIO1	gma-u.5 for 100778549	sly-u.5 for 101244782	osa-u.5 for 4345056	zma-u.5 for 100382888	bra-r.6 for 103856746	bra-r.6 for 103845194	vvi-u.5 for 100259784	ppo-u.5 for 18100519	mtr-u.5 for 11446047	tae-r.2 for 123144196	tae-r.2 for 123136715	tae-r.2 for 123132596	hvu-r.1 for 123401312	ghi-r.1 for 121212636	ghi-r.1 for 107944094	bna-r.1 for 106436665	bna-r.1 for 106402127	bna-r.1 for 106387199	sbi-r.1 for 8081870	sot-r.1 for 102579954	cit-r.1 for 102624762	bdi-r.1 for 100827183	nta-r.1 for 107788123	nta-r.1 for 107814376

Ortholog

Ortholog ID: 9171

Species

cre

ath

gma

sly

osa

zma

bra

vvi

ppo

mtr

tae

hvu

ghi

bna

sbi

sot

cit

bdi

nta

Symbol

BIO1

Function^*

uncharacterized protein

adenosylmethionine-8-amino-7-oxononanoate transaminase

bifunctional dethiobiotin synthetase/7,8-diamino-pelargonic acid aminotransferase, mitochondrial

bifunctional dethiobiotin synthetase/7,8-diamino-pelargonic acid aminotransferase, mitochondrial-like

uncharacterized LOC100382888

bifunctional dethiobiotin synthetase/7,8-diamino-pelargonic acid aminotransferase, mitochondrial

bifunctional dethiobiotin synthetase/7,8-diamino-pelargonic acid aminotransferase, mitochondrial-like

bifunctional dethiobiotin synthetase/7,8-diamino-pelargonic acid aminotransferase, mitochondrial

Coexmap

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Coexpression

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KEGG Info

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
cre00630	Glyoxylate and dicarboxylate metabolism	2
cre01200	Carbon metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ath03440	Homologous recombination	2
ath03430	Mismatch repair	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma04120	Ubiquitin mediated proteolysis	3
gma04814	Motor proteins	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sly03015	mRNA surveillance pathway	2
sly03013	Nucleocytoplasmic transport	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
osa03013	Nucleocytoplasmic transport	4
osa03430	Mismatch repair	3
osa03008	Ribosome biogenesis in eukaryotes	2
osa03030	DNA replication	2
osa03410	Base excision repair	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bra03440	Homologous recombination	2
bra03460	Fanconi anemia pathway	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ppo03082	ATP-dependent chromatin remodeling	3
ppo04120	Ubiquitin mediated proteolysis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
mtr00970	Aminoacyl-tRNA biosynthesis	3
mtr01240	Biosynthesis of cofactors	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae03013	Nucleocytoplasmic transport	5
tae03008	Ribosome biogenesis in eukaryotes	3
tae00780	Biotin metabolism	3
tae01240	Biosynthesis of cofactors	3
tae03018	RNA degradation	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae03013	Nucleocytoplasmic transport	6
tae00780	Biotin metabolism	3
tae01240	Biosynthesis of cofactors	3
tae03040	Spliceosome	3
tae03440	Homologous recombination	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae03040	Spliceosome	6
tae03013	Nucleocytoplasmic transport	5
tae00780	Biotin metabolism	2
tae01240	Biosynthesis of cofactors	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
hvu01240	Biosynthesis of cofactors	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi03420	Nucleotide excision repair	5
ghi03022	Basal transcription factors	3
ghi03410	Base excision repair	3
ghi03030	DNA replication	2
ghi03440	Homologous recombination	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi03420	Nucleotide excision repair	5
ghi03410	Base excision repair	4
ghi03022	Basal transcription factors	3
ghi00780	Biotin metabolism	2
ghi01240	Biosynthesis of cofactors	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bna00780	Biotin metabolism	6
bna01240	Biosynthesis of cofactors	6

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bna00780	Biotin metabolism	6
bna01240	Biosynthesis of cofactors	6

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bna00780	Biotin metabolism	6
bna01240	Biosynthesis of cofactors	6

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sbi03040	Spliceosome	2
sbi00780	Biotin metabolism	2
sbi01240	Biosynthesis of cofactors	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sot03013	Nucleocytoplasmic transport	5
sot03015	mRNA surveillance pathway	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
cit03018	RNA degradation	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bdi03008	Ribosome biogenesis in eukaryotes	3
bdi03020	RNA polymerase	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta00780	Biotin metabolism	4
nta01240	Biosynthesis of cofactors	4
nta03018	RNA degradation	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta00780	Biotin metabolism	4
nta01240	Biosynthesis of cofactors	4
nta03440	Homologous recombination	2
nta03460	Fanconi anemia pathway	2

Expression

Expression pattern

Entrez Gene ID^*

5716289

835863

100778549

101244782

4345056

100382888

103856746

103845194

100259784

18100519

11446047

123144196

123136715

123132596

123401312

121212636

107944094

106436665

106402127

125593003

8081870

102579954

102624762

100827183

107788123

107814376

The preparation time of this page was 0.2 [sec].


Species	cre	ath	gma	sly	osa	zma	bra	vvi	ppo	mtr	tae	hvu	ghi	bna	sbi	sot	cit	bdi	nta
Paralog	1	1	1	1	1	1	2	1	1	1	3	1	2	3	1	1	1	1	2

Select Species**

Orthologous genes in OrthoFinder**

Top 50 coexpressed genes to CHLRE_06g277200v5 (cre-r.1 coexpression data)

Top 50 enrichment test to CHLRE_06g277200v5 (cre-r.1 coexpression data)

Select Species^**

Orthologous genes in OrthoFinder^**