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Orthologous genes in OrthoFinder**

Species Gene Description
 cre-r.1   CHLRE_12g507450v5   uncharacterized protein 
 ath-u.5   SYP43   syntaxin of plants 43 
 ath-u.5   SYP42   syntaxin of plants 42 
 ath-u.5   SYP41   syntaxin of plants 41 
 gma-u.5   100803629   syntaxin-43-like 
 gma-u.5   100797056   syntaxin-43 
 gma-u.5   100796741   syntaxin-43 
 sly-u.5   101265370   syntaxin-43 
 sly-u.5   101263154   syntaxin-43 
 osa-u.5   4339929   syntaxin-43 
 zma-u.5   100192536   Syntaxin 43 
 zma-u.5   100191311   Syntaxin-41 
 bra-r.6   103870798   syntaxin-43 
 bra-r.6   103836768   syntaxin-42 
 bra-r.6   103849906   syntaxin-43 
 vvi-u.5   100248594   tlg2p-like protein a 
 vvi-u.5   100259549   tlg2p-like protein a 
 ppo-u.5   18098621   syntaxin-43 
 ppo-u.5   7478916   tlg2p-like protein a 
 mtr-u.5   11407189   syntaxin-43 
 mtr-u.5   25499622   syntaxin-43 
 tae-r.2   123167797   syntaxin-43 
 tae-r.2   123088277   syntaxin-43 
 tae-r.2   123149703   syntaxin-43 
 hvu-r.1   123411453   syntaxin-43-like 
 ghi-r.1   107887133   syntaxin-43 
 ghi-r.1   107912352   syntaxin-41 
 ghi-r.1   107915884   syntaxin-43 
 bna-r.1   125593862   syntaxin-43-like 
 bna-r.1   111200441   syntaxin-42-like 
 bna-r.1   106365506   syntaxin-42 
 sbi-r.1   8081426   syntaxin-43 
 sot-r.1   102582914   syntaxin-41-like 
 sot-r.1   102593977   syntaxin-43-like 
 cit-r.1   102612546   syntaxin-43 
 cit-r.1   102621573   syntaxin-42 
 bdi-r.1   100843493   syntaxin-43 
 nta-r.1   107760280   syntaxin-43-like 
 nta-r.1   107768812   syntaxin-43 

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Top 50 coexpressed genes to CHLRE_12g507450v5 (cre-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to CHLRE_12g507450v5 (cre-r.1 coexpression data)

CoexMap"5716501"


creCHLRE_12g507450v5 | Entrez gene ID : 5716501      
Species cre ath gma sly osa zma bra vvi ppo mtr tae hvu ghi bna sbi sot cit bdi nta
Paralog 1 3 3 2 1 2 3 2 2 2 3 1 3 3 1 2 2 1 2
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
KEGG cre04130 [list] [network] SNARE interactions in vesicular transport (17 genes)
GO BP
GO:0048278 [list] [network] vesicle docking  (17 genes)  IEA  
GO:0006906 [list] [network] vesicle fusion  (22 genes)  IEA  
GO:0006886 [list] [network] intracellular protein transport  (159 genes)  IEA  
GO:0016192 [list] [network] vesicle-mediated transport  (218 genes)  IEA  
GO CC
GO:0031201 [list] [network] SNARE complex  (20 genes)  IEA  
GO:0012505 [list] [network] endomembrane system  (737 genes)  IEA  
GO:0016020 [list] [network] membrane  (1543 genes)  IEA  
GO MF
GO:0005484 [list] [network] SNAP receptor activity  (19 genes)  IEA  
GO:0000149 [list] [network] SNARE binding  (30 genes)  IEA  
Protein XP_001690837.1 [sequence] [blastp]
Subcellular
localization
wolf
chlo 4,  mito 2,  golg 1,  mito_plas 1  (predict for XP_001690837.1)
Subcellular
localization
TargetP
mito 5  (predict for XP_001690837.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

cre-r.1
for
CHLRE_12g507450v5
ath-u.5
for
SYP43
ath-u.5
for
SYP42
ath-u.5
for
SYP41
gma-u.5
for
100803629
gma-u.5
for
100797056
gma-u.5
for
100796741
sly-u.5
for
101265370
sly-u.5
for
101263154
osa-u.5
for
4339929
zma-u.5
for
100192536
zma-u.5
for
100191311
bra-r.6
for
103870798
bra-r.6
for
103836768
bra-r.6
for
103849906
vvi-u.5
for
100248594
vvi-u.5
for
100259549
ppo-u.5
for
18098621
ppo-u.5
for
7478916
mtr-u.5
for
11407189
mtr-u.5
for
25499622
tae-r.2
for
123167797
tae-r.2
for
123088277
tae-r.2
for
123149703
hvu-r.1
for
123411453
ghi-r.1
for
107887133
ghi-r.1
for
107912352
ghi-r.1
for
107915884
bna-r.1
for
125593862
bna-r.1
for
111200441
bna-r.1
for
106365506
sbi-r.1
for
8081426
sot-r.1
for
102582914
sot-r.1
for
102593977
cit-r.1
for
102612546
cit-r.1
for
102621573
bdi-r.1
for
100843493
nta-r.1
for
107760280
nta-r.1
for
107768812


Ortholog ID: 3792
Species cre ath ath ath gma gma gma sly sly osa zma zma bra bra bra vvi vvi ppo ppo mtr mtr tae tae tae hvu ghi ghi ghi bna bna bna sbi sot sot cit cit bdi nta nta
Symbol CHLRE_12g507450v5 SYP43 SYP42 SYP41 LOC100803629 LOC100797056 LOC100796741 LOC101265370 LOC101263154 LOC4339929 LOC100192536 LOC100191311 LOC103870798 LOC103836768 LOC103849906 LOC100248594 LOC100259549 LOC18098621 LOC7478916 LOC11407189 LOC25499622 LOC123167797 LOC123088277 LOC123149703 LOC123411453 LOC107887133 LOC107915884 LOC107920745 LOC125593862 LOC106365506 LOC111213578 LOC8081426 LOC102582914 LOC102593977 LOC102612546 LOC102621573 LOC100843493 LOC107760280 LOC107768812
Function* uncharacterized protein syntaxin of plants 43 syntaxin of plants 42 syntaxin of plants 41 syntaxin-43-like syntaxin-43 syntaxin-43 syntaxin-43 syntaxin-43 syntaxin-43 Syntaxin 43 Syntaxin-41 syntaxin-43 syntaxin-42 syntaxin-43 tlg2p-like protein a tlg2p-like protein a syntaxin-43 tlg2p-like protein a syntaxin-43 syntaxin-43 syntaxin-43 syntaxin-43 syntaxin-43 syntaxin-43-like syntaxin-43 syntaxin-43 syntaxin-43 syntaxin-43-like syntaxin-42 syntaxin-43-like syntaxin-43 syntaxin-41-like syntaxin-43-like syntaxin-43 syntaxin-42 syntaxin-43 syntaxin-43-like syntaxin-43
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cre04130 SNARE interactions in vesicular transport 4
cre04144 Endocytosis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath04130 SNARE interactions in vesicular transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath00564 Glycerophospholipid metabolism 2
ath00565 Ether lipid metabolism 2
ath04144 Endocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma04130 SNARE interactions in vesicular transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma04130 SNARE interactions in vesicular transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma04130 SNARE interactions in vesicular transport 4
gma04145 Phagosome 4
gma04144 Endocytosis 3
gma03060 Protein export 2
gma04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly04136 Autophagy - other 2
sly04130 SNARE interactions in vesicular transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03040 Spliceosome 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma00520 Amino sugar and nucleotide sugar metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra04142 Lysosome 2
bra04144 Endocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi04136 Autophagy - other 3
vvi04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi01250 Biosynthesis of nucleotide sugars 5
vvi00520 Amino sugar and nucleotide sugar metabolism 4
vvi00541 Biosynthesis of various nucleotide sugars 3
vvi00040 Pentose and glucuronate interconversions 2
vvi00053 Ascorbate and aldarate metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03015 mRNA surveillance pathway 2
ppo04136 Autophagy - other 2
ppo04382 Cornified envelope formation 2
ppo04130 SNARE interactions in vesicular transport 2
ppo00270 Cysteine and methionine metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo04144 Endocytosis 2
ppo04142 Lysosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr04141 Protein processing in endoplasmic reticulum 4
mtr03060 Protein export 3
mtr04145 Phagosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03015 mRNA surveillance pathway 2
mtr00510 N-Glycan biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00230 Purine metabolism 3
tae00240 Pyrimidine metabolism 3
tae01232 Nucleotide metabolism 3
tae04130 SNARE interactions in vesicular transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00230 Purine metabolism 3
tae00240 Pyrimidine metabolism 3
tae01232 Nucleotide metabolism 3
tae04130 SNARE interactions in vesicular transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi04141 Protein processing in endoplasmic reticulum 6
ghi04130 SNARE interactions in vesicular transport 4
ghi03083 Polycomb repressive complex 2
ghi04148 Efferocytosis 2
ghi04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi04130 SNARE interactions in vesicular transport 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi04130 SNARE interactions in vesicular transport 4
ghi04148 Efferocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna04130 SNARE interactions in vesicular transport 6
bna00270 Cysteine and methionine metabolism 2
bna03013 Nucleocytoplasmic transport 2
bna03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03082 ATP-dependent chromatin remodeling 5
bna00230 Purine metabolism 2
bna00730 Thiamine metabolism 2
bna01232 Nucleotide metabolism 2
bna01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna04130 SNARE interactions in vesicular transport 6
bna00270 Cysteine and methionine metabolism 2
bna03013 Nucleocytoplasmic transport 2
bna03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi04144 Endocytosis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot04130 SNARE interactions in vesicular transport 2
sot00071 Fatty acid degradation 2
sot01212 Fatty acid metabolism 2
sot04136 Autophagy - other 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot04130 SNARE interactions in vesicular transport 3
sot00600 Sphingolipid metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03015 mRNA surveillance pathway 2
cit04144 Endocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi04130 SNARE interactions in vesicular transport 2
bdi04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta04130 SNARE interactions in vesicular transport 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta04130 SNARE interactions in vesicular transport 4
nta04814 Motor proteins 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 5716501 819740 827505 832756 100803629 100797056 100796741 101265370 101263154 4339929 100192536 100191311 103870798 103836768 103849906 100248594 100259549 18098621 7478916 11407189 25499622 123167797 123088277 123149703 123411453 107887133 107915884 107920745 125593862 106365506 111213578 8081426 102582914 102593977 102612546 102621573 100843493 107760280 107768812
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