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Orthologous genes in OrthoFinder**

Species Gene Description
 cre-r.1   CHLRE_12g486551v5   uncharacterized protein 
 ath-u.5   AT1G68080   2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein 
 gma-u.5   100788718   uncharacterized LOC100788718 
 sly-u.5   101261647   uncharacterized LOC101261647 
 osa-u.5   4332196   uncharacterized LOC4332196 
 zma-u.5   103639377   2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein 
 vvi-u.5   100256078   uncharacterized LOC100256078 
 ppo-u.5   7471441   uncharacterized LOC7471441 
 mtr-u.5   120577637   uncharacterized LOC120577637 
 mtr-u.5   120577715   uncharacterized LOC120577715 

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Top 50 coexpressed genes to CHLRE_12g486551v5 (cre-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to CHLRE_12g486551v5 (cre-r.1 coexpression data)

CoexMap"5716627"


creCHLRE_12g486551v5 | Entrez gene ID : 5716627    
Species cre ath gma sly osa zma vvi ppo mtr sbi nta bra hvu cit bdi sot tae bna ghi
Paralog 1 1 1 1 1 1 1 1 2 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0032963 [list] [network] collagen metabolic process  (2 genes)  IEA  
GO CC
GO MF
GO:0031418 [list] [network] L-ascorbic acid binding  (26 genes)  IEA  
GO:0005506 [list] [network] iron ion binding  (109 genes)  IEA  
GO:0016705 [list] [network] oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen  (128 genes)  IEA  
Protein XP_042918090.1 [sequence] [blastp]
Subcellular
localization
wolf
mito 4,  cyto 2,  mito_plas 2,  cyto_nucl 2,  chlo_mito 2,  cyto_mito 2  (predict for XP_042918090.1)
Subcellular
localization
TargetP
other 8  (predict for XP_042918090.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

cre-r.1
for
CHLRE_12g486551v5

.
ath-u.5
for
AT1G68080

.
gma-u.5
for
100788718

.
sly-u.5
for
101261647

.
osa-u.5
for
4332196

.
zma-u.5
for
103639377

.
vvi-u.5
for
100256078

.
ppo-u.5
for
7471441

.
mtr-u.5
for
120577637

.
mtr-u.5
for
120577715

.


Ortholog ID: 9284
Species ath gma sly osa zma bra vvi ppo mtr mtr tae tae hvu ghi ghi bna bna cre sbi sot cit bdi nta
Symbol AT1G68080 LOC100788718 LOC101261647 LOC4332196 LOC103639377 LOC103830987 LOC100256078 LOC7471441 LOC120577637 LOC120577715 LOC123098119 LOC123092829 LOC123449202 LOC121228306 LOC107898752 LOC106353863 LOC106353874 CHLRE_12g486551v5 LOC8078870 LOC102600453 LOC102618387 LOC104581832 LOC107779840
Function* 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein uncharacterized LOC100788718 uncharacterized LOC101261647 uncharacterized LOC4332196 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein uncharacterized LOC103830987 uncharacterized LOC100256078 uncharacterized LOC7471441 uncharacterized LOC120577637 uncharacterized LOC120577715 prolyl 3-hydroxylase 1 prolyl 3-hydroxylase 1 uncharacterized LOC123449202 uncharacterized LOC121228306 prolyl 3-hydroxylase 2 uncharacterized LOC106353863 uncharacterized LOC106353874 uncharacterized protein uncharacterized LOC8078870 prolyl 3-hydroxylase 1 uncharacterized LOC102618387 prolyl 3-hydroxylase 1 uncharacterized LOC107779840
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03010 Ribosome 4
gma00230 Purine metabolism 2
gma00240 Pyrimidine metabolism 2
gma01232 Nucleotide metabolism 2
gma01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr00970 Aminoacyl-tRNA biosynthesis 3
mtr01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03008 Ribosome biogenesis in eukaryotes 4
mtr03013 Nucleocytoplasmic transport 3
mtr03250 Viral life cycle - HIV-1 3
mtr03050 Proteasome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi04146 Peroxisome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cre04142 Lysosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit00480 Glutathione metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03020 RNA polymerase 4
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 843136 100788718 101261647 4332196 103639377 103830987 100256078 7471441 120577637 120577715 123098119 123092829 123449202 121228306 107898752 106353863 106353874 5716627 8078870 102600453 102618387 104581832 107779840
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