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Orthologous genes in OrthoFinder**

Species Gene Description
 cre-r.1   CHLRE_06g305200v5   uncharacterized protein 
 ath-u.5   SUF4   zinc finger (C2H2 type) family protein 
 gma-u.5   100819009   protein SUPPRESSOR OF FRI 4 
 gma-u.5   100789368   protein SUPPRESSOR OF FRI 4 
 sly-u.5   112940038   protein SUPPRESSOR OF FRI 4-like 
 sly-u.5   101262702   protein SUPPRESSOR OF FRI 4 
 sly-u.5   101259016   protein SUPPRESSOR OF FRI 4 
 osa-u.5   4347855   protein SUPPRESSOR OF FRI 4 
 zma-u.5   100217135   uncharacterized LOC100217135 
 vvi-u.5   100266425   protein SUPPRESSOR OF FRI 4 
 vvi-u.5   100251787   protein SUPPRESSOR OF FRI 4 
 ppo-u.5   18094650   protein SUPPRESSOR OF FRI 4 
 ppo-u.5   7456069   protein SUPPRESSOR OF FRI 4 
 mtr-u.5   11415762   protein SUPPRESSOR OF FRI 4 

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Top 50 coexpressed genes to CHLRE_06g305200v5 (cre-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to CHLRE_06g305200v5 (cre-r.1 coexpression data)

CoexMap"5716899"


creCHLRE_06g305200v5 | Entrez gene ID : 5716899    
Species cre ath gma sly osa zma vvi ppo mtr hvu sot tae nta bra cit ghi bna bdi sbi
Paralog 1 1 2 3 1 1 2 2 1 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO CC
GO:0005634 [list] [network] nucleus  (1576 genes)  IEA  
GO MF
Protein XP_001691390.2 [sequence] [blastp]
Subcellular
localization
wolf
mito 6,  nucl 4  (predict for XP_001691390.2)
Subcellular
localization
TargetP
other 9  (predict for XP_001691390.2)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

cre-r.1
for
CHLRE_06g305200v5

.
ath-u.5
for
SUF4

.
gma-u.5
for
100819009

.
gma-u.5
for
100789368

.
sly-u.5
for
112940038

.
sly-u.5
for
101262702

.
sly-u.5
for
101259016

.
osa-u.5
for
4347855

.
zma-u.5
for
100217135

.
vvi-u.5
for
100266425

.
vvi-u.5
for
100251787

.
ppo-u.5
for
18094650

.
ppo-u.5
for
7456069

.
mtr-u.5
for
11415762

.


Ortholog ID: 6413
Species ath gma gma sly sly osa zma bra bra vvi vvi ppo ppo mtr tae tae hvu ghi ghi bna bna cre sbi sot sot cit bdi nta nta
Symbol SUF4 LOC100819009 LOC100789368 LOC112940038 LOC101259016 LOC4347855 LOC100217135 LOC103840278 LOC103833415 LOC100251787 LOC100266425 LOC18094650 LOC7456069 LOC11415762 LOC123104830 LOC123113111 LOC123452012 LOC107927599 LOC107945286 LOC106437450 LOC106396763 CHLRE_06g305200v5 LOC8077265 LOC102601903 LOC102605492 LOC102629521 LOC100845853 LOC107811028 LOC107816661
Function* zinc finger (C2H2 type) family protein protein SUPPRESSOR OF FRI 4 protein SUPPRESSOR OF FRI 4 protein SUPPRESSOR OF FRI 4-like protein SUPPRESSOR OF FRI 4 protein SUPPRESSOR OF FRI 4 uncharacterized LOC100217135 protein SUPPRESSOR OF FRI 4 protein SUPPRESSOR OF FRI 4 protein SUPPRESSOR OF FRI 4 protein SUPPRESSOR OF FRI 4 protein SUPPRESSOR OF FRI 4 protein SUPPRESSOR OF FRI 4 protein SUPPRESSOR OF FRI 4 protein SUPPRESSOR OF FRI 4 protein SUPPRESSOR OF FRI 4 protein SUPPRESSOR OF FRI 4 protein SUPPRESSOR OF FRI 4 protein SUPPRESSOR OF FRI 4 protein SUPPRESSOR OF FRI 4 protein SUPPRESSOR OF FRI 4-like uncharacterized protein protein SUPPRESSOR OF FRI 4 protein SUPPRESSOR OF FRI 4 protein SUPPRESSOR OF FRI 4-like protein SUPPRESSOR OF FRI 4 protein SUPPRESSOR OF FRI 4 protein SUPPRESSOR OF FRI 4 protein SUPPRESSOR OF FRI 4
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03040 Spliceosome 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03040 Spliceosome 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03040 Spliceosome 4
gma03015 mRNA surveillance pathway 3
gma03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03040 Spliceosome 5
sly03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03040 Spliceosome 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03040 Spliceosome 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03040 Spliceosome 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03040 Spliceosome 5
ppo03013 Nucleocytoplasmic transport 2
ppo03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03040 Spliceosome 5
ppo03013 Nucleocytoplasmic transport 2
ppo03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03040 Spliceosome 4
tae03015 mRNA surveillance pathway 3
tae03082 ATP-dependent chromatin remodeling 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03040 Spliceosome 6
tae03015 mRNA surveillance pathway 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cre03040 Spliceosome 8
cre03013 Nucleocytoplasmic transport 3
cre03015 mRNA surveillance pathway 3
cre04130 SNARE interactions in vesicular transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03040 Spliceosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03040 Spliceosome 6
sot03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03040 Spliceosome 5
sot03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03040 Spliceosome 7
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03040 Spliceosome 3
nta03010 Ribosome 2
nta00770 Pantothenate and CoA biosynthesis 2
nta01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03040 Spliceosome 3
nta03010 Ribosome 2
nta00770 Pantothenate and CoA biosynthesis 2
nta01240 Biosynthesis of cofactors 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 839984 100819009 100789368 112940038 101259016 4347855 100217135 103840278 103833415 100251787 100266425 18094650 7456069 11415762 123104830 123113111 123452012 107927599 107945286 106437450 106396763 5716899 8077265 102601903 102605492 102629521 100845853 107811028 107816661
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