Select Species**


OK


Orthologous genes in OrthoFinder**

Species Gene Description
 cre-r.1   CHLRE_06g298100v5   uncharacterized protein 
 ath-u.5   AT4G27130   Translation initiation factor SUI1 family protein 
 ath-u.5   AT5G54760   Translation initiation factor SUI1 family protein 
 ath-u.5   AT5G54940   Translation initiation factor SUI1 family protein 
 gma-u.5   100787664   protein translation factor SUI1 homolog 2 
 gma-u.5   100499886   translation factor SUI1-like superfamily protein 
 gma-u.5   100499676   translation factor SUI1-like protein 
 sly-u.5   101247541   protein translation factor SUI1 homolog 
 sly-u.5   101257488   protein translation factor SUI1 homolog 
 osa-u.5   4324136   protein translation factor SUI1 homolog 
 osa-u.5   4339216   protein translation factor SUI1 homolog 
 osa-u.5   4343445   protein translation factor SUI1 homolog 
 zma-u.5   103631028   protein translation factor SUI1 homolog 
 vvi-u.5   100245122   protein translation factor SUI1 homolog 
 vvi-u.5   100243115   protein translation factor SUI1 homolog 1 
 vvi-u.5   100243506   protein translation factor SUI1 homolog 
 ppo-u.5   7454418   protein translation factor SUI1 homolog 
 ppo-u.5   7486038   protein translation factor SUI1 homolog 
 ppo-u.5   7468126   protein translation factor SUI1 homolog 2 
 mtr-u.5   11416614   protein translation factor SUI1 homolog 
 mtr-u.5   11428259   protein translation factor SUI1 homolog 1 
 mtr-u.5   11436635   protein translation factor SUI1 homolog 

close


Top 50 coexpressed genes to CHLRE_06g298100v5 (cre-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

close

close

Top 50 enrichment test to CHLRE_06g298100v5 (cre-r.1 coexpression data)

CoexMap"5717023"


creCHLRE_06g298100v5 | Entrez gene ID : 5717023      
Species cre ath gma sly osa zma vvi ppo mtr sbi nta bra hvu cit bdi sot tae bna ghi
Paralog 1 3 3 2 3 1 3 3 3 0 0 0 0 0 0 0 0 0 0
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0006413 [list] [network] translational initiation  (30 genes)  IEA  
GO CC
GO MF
GO:0003743 [list] [network] translation initiation factor activity  (37 genes)  IEA  
GO:0003723 [list] [network] RNA binding  (670 genes)  IEA  
Protein XP_001691459.1 [sequence] [blastp]
Subcellular
localization
wolf
cyto 6,  extr 2,  chlo 1  (predict for XP_001691459.1)
Subcellular
localization
TargetP
other 8  (predict for XP_001691459.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

cre-r.1
for
CHLRE_06g298100v5

.
ath-u.5
for
AT4G27130

.
ath-u.5
for
AT5G54760

.
ath-u.5
for
AT5G54940

.
gma-u.5
for
100787664

.
gma-u.5
for
100499886

.
gma-u.5
for
100499676

.
sly-u.5
for
101247541

.
sly-u.5
for
101257488

.
osa-u.5
for
4324136

.
osa-u.5
for
4339216

.
osa-u.5
for
4343445

.
zma-u.5
for
103631028

.
vvi-u.5
for
100245122

.
vvi-u.5
for
100243115

.
vvi-u.5
for
100243506

.
ppo-u.5
for
7454418

.
ppo-u.5
for
7486038

.
ppo-u.5
for
7468126

.
mtr-u.5
for
11416614

.
mtr-u.5
for
11428259

.
mtr-u.5
for
11436635

.


Ortholog ID: 669
Species ath ath gma gma sly sly osa osa zma bra bra vvi vvi ppo ppo mtr mtr tae tae hvu hvu ghi ghi bna bna cre sbi sbi sot sot cit cit bdi bdi nta
Symbol AT5G54940 AT1G54290 LOC100784390 LOC100791863 LOC101257488 LOC104649507 LOC4339216 LOC4324136 LOC103631028 LOC103832618 LOC103844945 LOC100243506 LOC100245122 LOC7486037 LOC7486038 LOC11416614 LOC11436635 LOC123079424 LOC123186182 LOC123425842 LOC123427928 LOC107920654 LOC107939859 LOC125609476 LOC106346004 CHLRE_06g298100v5 LOC110432939 LOC8080061 LOC102577437 LOC102587179 LOC102616070 LOC102626880 LOC100840498 LOC100833366 LOC107829372
Function* Translation initiation factor SUI1 family protein Translation initiation factor SUI1 family protein protein translation factor SUI1 homolog protein translation factor SUI1 homolog 1 protein translation factor SUI1 homolog protein translation factor SUI1 homolog protein translation factor SUI1 homolog protein translation factor SUI1 homolog protein translation factor SUI1 homolog protein translation factor SUI1 homolog 2 protein translation factor SUI1 homolog protein translation factor SUI1 homolog protein translation factor SUI1 homolog protein translation factor SUI1 homolog protein translation factor SUI1 homolog protein translation factor SUI1 homolog protein translation factor SUI1 homolog protein translation factor SUI1 homolog protein translation factor SUI1 homolog 2 protein translation factor SUI1 homolog protein translation factor SUI1 homolog 2-like protein translation factor SUI1 homolog 2 protein translation factor SUI1 homolog 2 protein translation factor SUI1 homolog 2-like protein translation factor SUI1 homolog uncharacterized protein protein translation factor SUI1 homolog protein translation factor SUI1 homolog uncharacterized LOC102577437 protein translation factor SUI1 homolog protein translation factor SUI1 homolog protein translation factor SUI1 homolog 2 protein translation factor SUI1 homolog protein translation factor SUI1 homolog protein translation factor SUI1 homolog
Coexmap

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.
Coexpression

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.
KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03040 Spliceosome 2
ath04130 SNARE interactions in vesicular transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath04120 Ubiquitin mediated proteolysis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma04136 Autophagy - other 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma04141 Protein processing in endoplasmic reticulum 4
gma03083 Polycomb repressive complex 2
gma04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly04141 Protein processing in endoplasmic reticulum 3
sly04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03083 Polycomb repressive complex 2
sly04120 Ubiquitin mediated proteolysis 2
sly04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa00240 Pyrimidine metabolism 2
osa01232 Nucleotide metabolism 2
osa01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma00480 Glutathione metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra00920 Sulfur metabolism 2
bra01200 Carbon metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi04141 Protein processing in endoplasmic reticulum 4
vvi03040 Spliceosome 2
vvi04144 Endocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae04144 Endocytosis 3
tae04075 Plant hormone signal transduction 3
tae00230 Purine metabolism 2
tae00730 Thiamine metabolism 2
tae01232 Nucleotide metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00970 Aminoacyl-tRNA biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu04120 Ubiquitin mediated proteolysis 3
hvu04130 SNARE interactions in vesicular transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03010 Ribosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna04142 Lysosome 3
bna00600 Sphingolipid metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03083 Polycomb repressive complex 4
bna04120 Ubiquitin mediated proteolysis 4
bna04141 Protein processing in endoplasmic reticulum 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cre03040 Spliceosome 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi04141 Protein processing in endoplasmic reticulum 3
sbi04120 Ubiquitin mediated proteolysis 2
sbi04144 Endocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi04141 Protein processing in endoplasmic reticulum 2
sbi03008 Ribosome biogenesis in eukaryotes 2
sbi03013 Nucleocytoplasmic transport 2
sbi03250 Viral life cycle - HIV-1 2
sbi01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03083 Polycomb repressive complex 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03083 Polycomb repressive complex 7
sot04141 Protein processing in endoplasmic reticulum 6
sot04120 Ubiquitin mediated proteolysis 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03050 Proteasome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit04141 Protein processing in endoplasmic reticulum 3
cit03083 Polycomb repressive complex 2
cit04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi04120 Ubiquitin mediated proteolysis 5
bdi04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi04142 Lysosome 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03008 Ribosome biogenesis in eukaryotes 2
nta03083 Polycomb repressive complex 2
nta04712 Circadian rhythm - plant 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 835585 841870 100784390 100791863 101257488 104649507 4339216 4324136 103631028 103832618 103844945 100243506 100245122 7486037 7486038 11416614 11436635 123079424 123186182 123425842 123427928 107920654 107939859 125609476 106346004 5717023 110432939 8080061 102577437 102587179 102616070 102626880 100840498 100833366 107829372
The preparation time of this page was 0.2 [sec].