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Orthologous genes in OrthoFinder**

Species Gene Description
 cre-r.1   CHLRE_16g683050v5   uncharacterized protein 
 ath-u.5   emb2746   RNA-metabolising metallo-beta-lactamase family protein 
 gma-u.5   100814619   ribonuclease J 
 gma-u.5   100783850   ribonuclease J 
 gma-u.5   100779771   ribonuclease J 
 sly-u.5   101264202   ribonuclease J 
 osa-u.5   4329586   ribonuclease J 
 zma-u.5   103654858   ribonuclease J 
 zma-u.5   103626744   uncharacterized LOC103626744 
 vvi-u.5   100268000   ribonuclease J 
 ppo-u.5   7463114   ribonuclease J 
 ppo-u.5   7454544   ribonuclease J 
 mtr-u.5   11405571   ribonuclease J 
 mtr-u.5   11427815   ribonuclease J 

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Top 50 coexpressed genes to CHLRE_16g683050v5 (cre-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to CHLRE_16g683050v5 (cre-r.1 coexpression data)

CoexMap"5717591"


creCHLRE_16g683050v5 | Entrez gene ID : 5717591    
Species cre ath gma sly osa zma vvi ppo mtr sbi nta bra hvu cit bdi sot tae bna ghi
Paralog 1 1 3 1 1 2 1 2 2 0 0 0 0 0 0 0 0 0 0
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO CC
GO MF
Protein XP_001692070.2 [sequence] [blastp]
Subcellular
localization
wolf
chlo 8,  pero 1  (predict for XP_001692070.2)
Subcellular
localization
TargetP
chlo 8  (predict for XP_001692070.2)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

cre-r.1
for
CHLRE_16g683050v5

.
ath-u.5
for
emb2746

.
gma-u.5
for
100814619

.
gma-u.5
for
100783850

.
gma-u.5
for
100779771

.
sly-u.5
for
101264202

.
osa-u.5
for
4329586

.
zma-u.5
for
103654858

.
zma-u.5
for
103626744

.
vvi-u.5
for
100268000

.
ppo-u.5
for
7463114

.
ppo-u.5
for
7454544

.
mtr-u.5
for
11405571

.
mtr-u.5
for
11427815

.


Ortholog ID: 7394
Species ath gma gma sly osa zma zma bra vvi ppo ppo mtr mtr tae tae hvu ghi ghi bna bna cre sbi sot cit bdi nta nta
Symbol emb2746 LOC100814619 LOC100783850 LOC101264202 LOC4329586 LOC103654858 LOC103626744 LOC103873754 LOC100268000 LOC7454544 LOC7463114 LOC11405571 LOC11427815 LOC123144543 LOC123127439 LOC123401271 LOC107941974 LOC107941244 LOC106431255 LOC106347909 CHLRE_16g683050v5 LOC8079424 LOC102586834 LOC102606767 LOC100825739 LOC107797349 LOC107767987
Function* RNA-metabolising metallo-beta-lactamase family protein ribonuclease J ribonuclease J ribonuclease J ribonuclease J ribonuclease J uncharacterized LOC103626744 ribonuclease J ribonuclease J ribonuclease J ribonuclease J ribonuclease J ribonuclease J ribonuclease J ribonuclease J ribonuclease J ribonuclease J ribonuclease J ribonuclease J ribonuclease J uncharacterized protein ribonuclease J ribonuclease J ribonuclease J ribonuclease J ribonuclease J ribonuclease J
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo00500 Starch and sucrose metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo00500 Starch and sucrose metabolism 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr00061 Fatty acid biosynthesis 8
mtr01212 Fatty acid metabolism 8
mtr00620 Pyruvate metabolism 8
mtr01200 Carbon metabolism 8
mtr01240 Biosynthesis of cofactors 7
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr04712 Circadian rhythm - plant 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00970 Aminoacyl-tRNA biosynthesis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna04141 Protein processing in endoplasmic reticulum 3
bna04626 Plant-pathogen interaction 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna04141 Protein processing in endoplasmic reticulum 3
bna04626 Plant-pathogen interaction 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cre00230 Purine metabolism 5
cre00500 Starch and sucrose metabolism 4
cre01200 Carbon metabolism 3
cre00220 Arginine biosynthesis 2
cre00250 Alanine, aspartate and glutamate metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit00970 Aminoacyl-tRNA biosynthesis 4
cit00500 Starch and sucrose metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi04146 Peroxisome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00970 Aminoacyl-tRNA biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00970 Aminoacyl-tRNA biosynthesis 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 836461 100814619 100783850 101264202 4329586 103654858 103626744 103873754 100268000 7454544 7463114 11405571 11427815 123144543 123127439 123401271 107941974 107941244 106431255 106347909 5717591 8079424 102586834 102606767 100825739 107797349 107767987
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