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Orthologous genes in OrthoFinder**

Species Gene Description
 cre-r.1   CHLRE_16g686000v5   uncharacterized protein 
 ath-u.5   AT3G52120   SWAP (Suppressor-of-White-APricot)/surp domain-containing protein / D111/G-patch domain-containing protein 
 gma-u.5   100813337   SURP and G-patch domain-containing protein 1-like protein 
 gma-u.5   100786213   SURP and G-patch domain-containing protein 1-like protein 
 sly-u.5   101265475   SURP and G-patch domain-containing protein 1-like protein 
 osa-u.5   4346613   SURP and G-patch domain-containing protein 1-like protein 
 zma-u.5   100284792   gamma response I protein 
 vvi-u.5   100855141   SURP and G-patch domain-containing protein 1-like protein 
 ppo-u.5   18102049   SURP and G-patch domain-containing protein 1-like protein 
 ppo-u.5   7463861   SURP and G-patch domain-containing protein 1-like protein 
 mtr-u.5   11446217   SURP and G-patch domain-containing protein 1-like protein 
 mtr-u.5   25501036   SURP and G-patch domain-containing protein 1-like protein 

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Top 50 coexpressed genes to CHLRE_16g686000v5 (cre-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to CHLRE_16g686000v5 (cre-r.1 coexpression data)

CoexMap"5717645"


creCHLRE_16g686000v5 | Entrez gene ID : 5717645    
Species cre ath gma sly osa zma vvi ppo mtr sbi nta bra hvu cit bdi sot tae bna ghi
Paralog 1 1 2 1 1 1 1 2 2 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0006396 [list] [network] RNA processing  (507 genes)  IEA  
GO CC
GO:0005654 [list] [network] nucleoplasm  (152 genes)  IEA  
GO MF
GO:0003723 [list] [network] RNA binding  (670 genes)  IEA  
Protein XP_042915930.1 [sequence] [blastp]
Subcellular
localization
wolf
nucl 9,  cyto 1,  mito 1  (predict for XP_042915930.1)
Subcellular
localization
TargetP
other 4,  mito 3  (predict for XP_042915930.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

cre-r.1
for
CHLRE_16g686000v5

.
ath-u.5
for
AT3G52120

.
gma-u.5
for
100813337

.
gma-u.5
for
100786213

.
sly-u.5
for
101265475

.
osa-u.5
for
4346613

.
zma-u.5
for
100284792

.
vvi-u.5
for
100855141

.
ppo-u.5
for
18102049

.
ppo-u.5
for
7463861

.
mtr-u.5
for
11446217

.
mtr-u.5
for
25501036

.


Ortholog ID: 9533
Species ath gma gma sly osa zma bra vvi ppo ppo mtr mtr tae tae hvu ghi ghi bna bna cre sbi cit bdi nta nta
Symbol AT3G52120 LOC100813337 LOC100786213 LOC101265475 LOC4346613 LOC100284792 LOC103841148 LOC100855141 LOC18102049 LOC7463861 LOC25501036 LOC11446217 LOC123120989 LOC123103416 LOC123452573 LOC107920003 LOC107926266 LOC106402613 LOC106367846 CHLRE_16g686000v5 LOC110432503 LOC102626511 LOC100828031 LOC107775837 LOC107820967
Function* SWAP (Suppressor-of-White-APricot)/surp domain-containing protein / D111/G-patch domain-containing protein SURP and G-patch domain-containing protein 1-like protein SURP and G-patch domain-containing protein 1-like protein SURP and G-patch domain-containing protein 1-like protein SURP and G-patch domain-containing protein 1-like protein gamma response I protein SURP and G-patch domain-containing protein 1-like protein SURP and G-patch domain-containing protein 1-like protein SURP and G-patch domain-containing protein 1-like protein SURP and G-patch domain-containing protein 1-like protein SURP and G-patch domain-containing protein 1-like protein SURP and G-patch domain-containing protein 1-like protein SURP and G-patch domain-containing protein 1-like protein SURP and G-patch domain-containing protein 1-like protein SURP and G-patch domain-containing protein 1-like protein SURP and G-patch domain-containing protein 1-like protein SURP and G-patch domain-containing protein 1-like protein SURP and G-patch domain-containing protein 1-like protein SURP and G-patch domain-containing protein 1-like protein uncharacterized protein SURP and G-patch domain-containing protein 1-like protein SURP and G-patch domain-containing protein 1-like protein SURP and G-patch domain-containing protein 1-like protein SURP and G-patch domain-containing protein 1-like protein SURP and G-patch domain-containing protein 1-like protein
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03022 Basal transcription factors 2
ath03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03060 Protein export 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03040 Spliceosome 3
osa03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03040 Spliceosome 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra04136 Autophagy - other 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03015 mRNA surveillance pathway 2
vvi03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo00190 Oxidative phosphorylation 4
ppo04145 Phagosome 4
ppo04142 Lysosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03040 Spliceosome 2
mtr03082 ATP-dependent chromatin remodeling 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03013 Nucleocytoplasmic transport 2
ghi03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03083 Polycomb repressive complex 6
bna03250 Viral life cycle - HIV-1 6
bna04141 Protein processing in endoplasmic reticulum 4
bna03022 Basal transcription factors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03083 Polycomb repressive complex 6
bna03250 Viral life cycle - HIV-1 6
bna04141 Protein processing in endoplasmic reticulum 4
bna03022 Basal transcription factors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi00564 Glycerophospholipid metabolism 2
bdi04070 Phosphatidylinositol signaling system 2
bdi03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00780 Biotin metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03013 Nucleocytoplasmic transport 4
nta03015 mRNA surveillance pathway 4
nta03040 Spliceosome 3
nta00780 Biotin metabolism 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 824376 100813337 100786213 101265475 4346613 100284792 103841148 100855141 18102049 7463861 25501036 11446217 123120989 123103416 123452573 107920003 107926266 106402613 106367846 5717645 110432503 102626511 100828031 107775837 107820967
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