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Orthologous genes in OrthoFinder**

Species Gene Description
 cre-r.1   CHLRE_07g341650v5   uncharacterized protein 
 ath-u.5   AT3G05760   C2H2 and C2HC zinc fingers superfamily protein 
 gma-u.5   100795833   zinc finger matrin-type protein 2 
 gma-u.5   100527057   C2H2-type zinc finger domain-containing protein 
 sly-u.5   101244419   zinc finger matrin-type protein 2 
 osa-u.5   4334674   uncharacterized LOC4334674 
 zma-u.5   107275236   C2H2 and C2HC zinc fingers superfamily protein 
 vvi-u.5   100263190   uncharacterized LOC100263190 
 ppo-u.5   7478910   uncharacterized LOC7478910 
 mtr-u.5   25499650   zinc finger matrin-type protein 2 

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Top 50 coexpressed genes to CHLRE_07g341650v5 (cre-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to CHLRE_07g341650v5 (cre-r.1 coexpression data)

CoexMap"5718111"


creCHLRE_07g341650v5 | Entrez gene ID : 5718111      
Species cre ath gma sly osa zma vvi ppo mtr sbi nta bra hvu cit bdi sot tae bna ghi
Paralog 1 1 2 1 1 1 1 1 1 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG cre03040 [list] [network] Spliceosome (105 genes)
GO BP
GO:0000398 [list] [network] mRNA splicing, via spliceosome  (103 genes)  IEA  
GO CC
GO:0046540 [list] [network] U4/U6 x U5 tri-snRNP complex  (18 genes)  IEA  
GO:0005681 [list] [network] spliceosomal complex  (105 genes)  IEA  
GO MF
GO:0008270 [list] [network] zinc ion binding  (213 genes)  IEA  
GO:0003676 [list] [network] nucleic acid binding  (1484 genes)  IEA  
Protein XP_001692411.1 [sequence] [blastp]
Subcellular
localization
wolf
nucl 7,  mito 3  (predict for XP_001692411.1)
Subcellular
localization
TargetP
other 8,  mito 3  (predict for XP_001692411.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

cre-r.1
for
CHLRE_07g341650v5

.
ath-u.5
for
AT3G05760

.
gma-u.5
for
100795833

.
gma-u.5
for
100527057

.
sly-u.5
for
101244419

.
osa-u.5
for
4334674

.
zma-u.5
for
107275236

.
vvi-u.5
for
100263190

.
ppo-u.5
for
7478910

.
mtr-u.5
for
25499650

.


Ortholog ID: 8442
Species ath gma gma sly osa zma bra vvi ppo mtr tae tae hvu ghi ghi bna bna cre sbi sot cit bdi nta nta
Symbol AT3G05760 LOC100795833 LOC100527057 LOC101244419 LOC4334674 LOC107275236 LOC103870796 LOC100263190 LOC7478910 LOC25499650 LOC123088153 LOC123046952 LOC123428007 LOC107933814 LOC107893941 LOC106399335 LOC125587962 CHLRE_07g341650v5 LOC8084372 LOC102601798 LOC102616760 LOC100829988 LOC107814167 LOC107783792
Function* C2H2 and C2HC zinc fingers superfamily protein zinc finger matrin-type protein 2 C2H2-type zinc finger domain-containing protein zinc finger matrin-type protein 2 uncharacterized LOC4334674 C2H2 and C2HC zinc fingers superfamily protein zinc finger matrin-type protein 2 uncharacterized LOC100263190 uncharacterized LOC7478910 zinc finger matrin-type protein 2 zinc finger matrin-type protein 2 zinc finger matrin-type protein 2 zinc finger matrin-type protein 2 zinc finger matrin-type protein 2 zinc finger matrin-type protein 2 zinc finger matrin-type protein 2 zinc finger matrin-type protein 2-like uncharacterized protein zinc finger matrin-type protein 2 zinc finger matrin-type protein 2 uncharacterized LOC102616760 zinc finger matrin-type protein 2 uncharacterized LOC107814167 uncharacterized LOC107783792
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03040 Spliceosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03040 Spliceosome 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03040 Spliceosome 3
gma04120 Ubiquitin mediated proteolysis 2
gma03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03040 Spliceosome 2
sly03060 Protein export 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03040 Spliceosome 4
bra03082 ATP-dependent chromatin remodeling 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03040 Spliceosome 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03010 Ribosome 5
mtr03040 Spliceosome 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00480 Glutathione metabolism 3
tae03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu00190 Oxidative phosphorylation 3
hvu03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03010 Ribosome 2
ghi03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi04141 Protein processing in endoplasmic reticulum 4
ghi03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03018 RNA degradation 3
bna03040 Spliceosome 3
bna04120 Ubiquitin mediated proteolysis 2
bna04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03040 Spliceosome 5
bna00190 Oxidative phosphorylation 3
bna03018 RNA degradation 3
bna04120 Ubiquitin mediated proteolysis 2
bna04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cre03040 Spliceosome 6
cre03015 mRNA surveillance pathway 2
cre03020 RNA polymerase 2
cre03420 Nucleotide excision repair 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03040 Spliceosome 5
sbi03022 Basal transcription factors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03040 Spliceosome 2
sot03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03015 mRNA surveillance pathway 2
cit04144 Endocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03040 Spliceosome 4
bdi03022 Basal transcription factors 2
bdi03420 Nucleotide excision repair 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03040 Spliceosome 3
nta04120 Ubiquitin mediated proteolysis 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 819745 100795833 100527057 101244419 4334674 107275236 103870796 100263190 7478910 25499650 123088153 123046952 123428007 107933814 107893941 106399335 125587962 5718111 8084372 102601798 102616760 100829988 107814167 107783792
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