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Orthologous genes in OrthoFinder**

Species Gene Description
 cre-r.1   CHLRE_12g549600v5   uncharacterized protein 
 gma-u.5   100794928   tetratricopeptide repeat protein 5 
 gma-u.5   100791647   tetratricopeptide repeat protein 5 
 sly-u.5   101258803   uncharacterized LOC101258803 
 sly-u.5   101261329   uncharacterized LOC101261329 
 osa-u.5   4324040   uncharacterized LOC4324040 
 zma-u.5   100194074   uncharacterized LOC100194074 
 vvi-u.5   100257758   uncharacterized LOC100257758 
 ppo-u.5   7459799   uncharacterized LOC7459799 
 mtr-u.5   11444991   tetratricopeptide repeat protein 5 
 tae-r.2   123078275   tetratricopeptide repeat protein 5 
 tae-r.2   123061212   tetratricopeptide repeat protein 5 
 tae-r.2   123069842   tetratricopeptide repeat protein 5 
 hvu-r.1   123443615   tetratricopeptide repeat protein 5-like 
 ghi-r.1   121228190   tetratricopeptide repeat protein 5 
 ghi-r.1   107899006   tetratricopeptide repeat protein 5 
 sbi-r.1   8069596   tetratricopeptide repeat protein 5 
 sot-r.1   102582201   uncharacterized LOC102582201 
 cit-r.1   102623790   uncharacterized LOC102623790 
 bdi-r.1   100828790   tetratricopeptide repeat protein 5 
 nta-r.1   142161722   uncharacterized LOC142161722 

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Top 50 coexpressed genes to CHLRE_12g549600v5 (cre-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to CHLRE_12g549600v5 (cre-r.1 coexpression data)

CoexMap"5719645"


creCHLRE_12g549600v5 | Entrez gene ID : 5719645    
Species cre gma sly osa zma vvi ppo mtr tae hvu ghi sbi sot cit bdi nta bna bra ath
Paralog 1 2 2 1 1 1 1 1 3 1 2 1 1 1 1 1 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO CC
GO MF
GO:0005515 [list] [network] protein binding  (1927 genes)  IEA  
Protein XP_042919025.1 [sequence] [blastp]
Subcellular
localization
wolf
plas 4,  nucl 2,  golg_plas 2,  cyto 1,  E.R. 1,  cyto_E.R. 1  (predict for XP_042919025.1)
Subcellular
localization
TargetP
other 6  (predict for XP_042919025.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

cre-r.1
for
CHLRE_12g549600v5
gma-u.5
for
100794928
gma-u.5
for
100791647
sly-u.5
for
101258803
sly-u.5
for
101261329
osa-u.5
for
4324040
zma-u.5
for
100194074
vvi-u.5
for
100257758
ppo-u.5
for
7459799
mtr-u.5
for
11444991
tae-r.2
for
123078275
tae-r.2
for
123061212
tae-r.2
for
123069842
hvu-r.1
for
123443615
ghi-r.1
for
121228190
ghi-r.1
for
107899006
sbi-r.1
for
8069596
sot-r.1
for
102582201
cit-r.1
for
102623790
bdi-r.1
for
100828790
nta-r.1
for
142161722


Ortholog ID: 4324
Species cre gma gma sly sly sly osa zma vvi ppo mtr tae tae tae hvu ghi ghi sbi cit bdi nta
Symbol CHLRE_12g549600v5 LOC100794928 LOC100791647 LOC101258803 LOC101261329 LOC101258508 LOC4324040 LOC100194074 LOC100257758 LOC7459799 LOC11444991 LOC123078275 LOC123061212 LOC123069842 LOC123443615 LOC121228190 LOC107899006 LOC8069596 LOC102623790 LOC100828790 LOC107771399
Function* uncharacterized protein tetratricopeptide repeat protein 5 tetratricopeptide repeat protein 5 uncharacterized LOC101258803 uncharacterized LOC101261329 uncharacterized LOC101258508 uncharacterized LOC4324040 uncharacterized LOC100194074 uncharacterized LOC100257758 uncharacterized LOC7459799 tetratricopeptide repeat protein 5 tetratricopeptide repeat protein 5 tetratricopeptide repeat protein 5 tetratricopeptide repeat protein 5 tetratricopeptide repeat protein 5-like tetratricopeptide repeat protein 5 tetratricopeptide repeat protein 5 tetratricopeptide repeat protein 5 uncharacterized LOC102623790 tetratricopeptide repeat protein 5 uncharacterized LOC107771399
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma00563 Glycosylphosphatidylinositol (GPI)-anchor biosynthesis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03015 mRNA surveillance pathway 2
gma04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly04136 Autophagy - other 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly04145 Phagosome 2
sly04517 IgSF CAM signaling 2
sly04814 Motor proteins 2
sly03440 Homologous recombination 2
sly03410 Base excision repair 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03015 mRNA surveillance pathway 2
zma04120 Ubiquitin mediated proteolysis 2
zma03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi04136 Autophagy - other 3
vvi04120 Ubiquitin mediated proteolysis 2
vvi04130 SNARE interactions in vesicular transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr04141 Protein processing in endoplasmic reticulum 4
mtr03010 Ribosome 2
mtr03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00010 Glycolysis / Gluconeogenesis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03410 Base excision repair 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03410 Base excision repair 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03440 Homologous recombination 2
nta03460 Fanconi anemia pathway 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 5719645 100794928 100791647 101258803 101261329 101258508 4324040 100194074 100257758 7459799 11444991 123078275 123061212 123069842 123443615 121228190 107899006 8069596 102623790 100828790 107771399
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