ATTED-II : GeneCoexpression result

Species	Gene	Description
cre-r.1	CHLRE_08g385100v5	uncharacterized protein
ath-u.5	AT2G44310	Calcium-binding EF-hand family protein
gma-u.5	100800510	uncharacterized LOC100800510
gma-u.5	100792416	uncharacterized LOC100792416
gma-u.5	100791068	uncharacterized LOC100791068
sly-u.5	101248133	uncharacterized LOC101248133
osa-u.5	9271885	uncharacterized LOC9271885
osa-u.5	4347412	uncharacterized LOC4347412
zma-u.5	100191804	uncharacterized LOC100191804
bra-r.6	103858127	uncharacterized LOC103858127
vvi-u.5	100255025	uncharacterized LOC100255025
vvi-u.5	100260129	uncharacterized LOC100260129
mtr-u.5	25502423	uncharacterized LOC25502423
mtr-u.5	25497723	uncharacterized LOC25497723
mtr-u.5	11442929	uncharacterized LOC11442929
tae-r.2	123112379	uncharacterized LOC123112379
tae-r.2	123117314	uncharacterized LOC123117314
tae-r.2	123125002	uncharacterized LOC123125002
hvu-r.1	123399034	uncharacterized LOC123399034
ghi-r.1	107899204	uncharacterized LOC107899204
ghi-r.1	107956905	uncharacterized LOC107956905
ghi-r.1	107954705	uncharacterized LOC107954705
bna-r.1	106438216	uncharacterized LOC106438216
bna-r.1	106388352	uncharacterized LOC106388352
sbi-r.1	8064044	uncharacterized LOC8064044
sbi-r.1	8055859	uncharacterized LOC8055859
sbi-r.1	8055199	uncharacterized LOC8055199
sot-r.1	102593067	uncharacterized LOC102593067
cit-r.1	102625783	uncharacterized LOC102625783
cit-r.1	102626661	uncharacterized LOC102626661
cit-r.1	102626363	uncharacterized LOC102626363
bdi-r.1	100829094	uncharacterized LOC100829094
nta-r.1	107820817	uncharacterized LOC107820817
nta-r.1	107759007	uncharacterized LOC107759007

Annotation

functional annotation

KEGG

GO BP

GO CC

GO MF

GO:0005509 [list] [network] calcium ion binding

(171 genes)

IEA

Protein

XP_042922354.1 [sequence] [blastp]

Subcellular
localization
wolf

chlo 4, cyto 2, nucl 1, nucl_plas 1, mito 1

(predict for XP_042922354.1)

Subcellular
localization
TargetP

other 8

(predict for XP_042922354.1)

Gene expression

All samples

[Expression pattern]

Tissue specificity^*

Coexpression

	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	Target	Reference
	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	cre-r.1 for CHLRE_08g385100v5	ath-u.5 for AT2G44310	gma-u.5 for 100800510	gma-u.5 for 100792416	gma-u.5 for 100791068	sly-u.5 for 101248133	osa-u.5 for 9271885	osa-u.5 for 4347412	zma-u.5 for 100191804	bra-r.6 for 103858127	vvi-u.5 for 100255025	vvi-u.5 for 100260129	mtr-u.5 for 25502423	mtr-u.5 for 25497723	mtr-u.5 for 11442929	tae-r.2 for 123112379	tae-r.2 for 123117314	tae-r.2 for 123125002	hvu-r.1 for 123399034	ghi-r.1 for 107899204	ghi-r.1 for 107956905	ghi-r.1 for 107954705	bna-r.1 for 106438216	bna-r.1 for 106388352	sbi-r.1 for 8064044	sbi-r.1 for 8055859	sbi-r.1 for 8055199	sot-r.1 for 102593067	cit-r.1 for 102625783	cit-r.1 for 102626661	cit-r.1 for 102626363	bdi-r.1 for 100829094	nta-r.1 for 107820817	nta-r.1 for 107759007

Ortholog

Ortholog ID: 1013

Species

cre

ath

gma

sly

osa

zma

bra

vvi

mtr

tae

hvu

ghi

bna

sbi

sot

cit

bdi

nta

Symbol

Function^*

uncharacterized protein

Calcium-binding EF-hand family protein

uncharacterized LOC100791068

uncharacterized LOC100813858

uncharacterized LOC100782908

uncharacterized LOC101248133

uncharacterized LOC4347408

uncharacterized LOC103632927

uncharacterized LOC103858127

uncharacterized LOC100260129

uncharacterized LOC25502423

uncharacterized LOC25497723

uncharacterized LOC11443847

uncharacterized LOC123117314

uncharacterized LOC123125002

uncharacterized LOC123108110

uncharacterized LOC123399034

uncharacterized LOC107954705

uncharacterized LOC107956748

uncharacterized LOC106438216

uncharacterized LOC106388352

uncharacterized LOC8064044

uncharacterized LOC8055859

uncharacterized LOC102593067

uncharacterized LOC102626661

uncharacterized LOC102626363

hypothetical protein

uncharacterized LOC100829094

uncharacterized LOC107820817

uncharacterized LOC107759007

Coexmap

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Coexpression

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KEGG Info

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ath04070	Phosphatidylinositol signaling system	3
ath04016	MAPK signaling pathway - plant	2
ath04075	Plant hormone signal transduction	2
ath04626	Plant-pathogen interaction	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma00010	Glycolysis / Gluconeogenesis	7
gma01200	Carbon metabolism	6
gma01230	Biosynthesis of amino acids	6
gma00620	Pyruvate metabolism	2
gma03018	RNA degradation	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma04626	Plant-pathogen interaction	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma00010	Glycolysis / Gluconeogenesis	7
gma01200	Carbon metabolism	6
gma01230	Biosynthesis of amino acids	6
gma04016	MAPK signaling pathway - plant	2
gma04075	Plant hormone signal transduction	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sly00190	Oxidative phosphorylation	6
sly04145	Phagosome	5
sly04142	Lysosome	3
sly03010	Ribosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
osa00010	Glycolysis / Gluconeogenesis	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
zma00740	Riboflavin metabolism	2
zma00564	Glycerophospholipid metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bra00480	Glutathione metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
mtr00196	Photosynthesis - antenna proteins	3
mtr00860	Porphyrin metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi00600	Sphingolipid metabolism	2
ghi04141	Protein processing in endoplasmic reticulum	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi00061	Fatty acid biosynthesis	4
ghi01040	Biosynthesis of unsaturated fatty acids	4
ghi01212	Fatty acid metabolism	4
ghi00600	Sphingolipid metabolism	2
ghi04141	Protein processing in endoplasmic reticulum	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bna04120	Ubiquitin mediated proteolysis	2
bna04141	Protein processing in endoplasmic reticulum	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bna04120	Ubiquitin mediated proteolysis	2
bna04141	Protein processing in endoplasmic reticulum	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sbi04626	Plant-pathogen interaction	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sbi00564	Glycerophospholipid metabolism	3
sbi00740	Riboflavin metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sot04075	Plant hormone signal transduction	3
sot04016	MAPK signaling pathway - plant	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
cit01240	Biosynthesis of cofactors	2
cit00564	Glycerophospholipid metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bdi04712	Circadian rhythm - plant	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta00520	Amino sugar and nucleotide sugar metabolism	2
nta01250	Biosynthesis of nucleotide sugars	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta00520	Amino sugar and nucleotide sugar metabolism	2
nta01250	Biosynthesis of nucleotide sugars	2

Expression

Expression pattern

Entrez Gene ID^*

5719796

819039

100791068

100813858

100782908

101248133

4347408

103632927

103858127

100260129

25502423

25497723

11443847

123117314

123125002

123108110

123399034

107954705

107956748

106438216

106388352

8064044

8055859

102593067

102626661

102626363

102621981

100829094

107820817

107759007

Select Species^**

Orthologous genes in OrthoFinder^**

Top 50 coexpressed genes to CHLRE_08g385100v5 (cre-r.1 coexpression data)

Top 50 enrichment test to CHLRE_08g385100v5 (cre-r.1 coexpression data)


Species	cre	ath	gma	sly	osa	zma	bra	vvi	mtr	tae	hvu	ghi	bna	sbi	sot	cit	bdi	nta	ppo
Paralog	1	1	3	1	2	1	1	2	3	3	1	3	2	3	1	3	1	2	0

Select Species**

Orthologous genes in OrthoFinder**

Top 50 coexpressed genes to CHLRE_08g385100v5 (cre-r.1 coexpression data)

Top 50 enrichment test to CHLRE_08g385100v5 (cre-r.1 coexpression data)

Select Species^**

Orthologous genes in OrthoFinder^**