ATTED-II : GeneCoexpression result

Select Species^**

Orthologous genes in OrthoFinder^**

Species	Gene	Description
cre-r.1	CHLRE_08g375850v5	uncharacterized protein
ath-u.5	AT5G11600	uncharacterized protein
ath-u.5	AT1G19990	nucleolin
gma-u.5	100812528	uncharacterized LOC100812528
gma-u.5	100801758	uncharacterized protein DDB_G0284459
gma-u.5	100786782	uncharacterized LOC100786782
sly-u.5	101263701	uncharacterized LOC101263701
sly-u.5	101249523	uncharacterized LOC101249523
osa-u.5	4332261	uncharacterized LOC4332261
osa-u.5	4339819	uncharacterized LOC4339819
zma-u.5	100276253	uncharacterized LOC100276253
zma-u.5	100276864	uncharacterized LOC100276864
bra-r.6	103850785	uncharacterized LOC103850785
bra-r.6	103872806	DNA ligase 1
vvi-u.5	100242110	uncharacterized LOC100242110
vvi-u.5	100262893	uncharacterized LOC100262893
ppo-u.5	7462302	uncharacterized LOC7462302
ppo-u.5	7476703	uncharacterized LOC7476703
ppo-u.5	7477674	uncharacterized LOC7477674
mtr-u.5	11442507	FACT complex subunit SSRP1
mtr-u.5	25490132	uncharacterized LOC25490132
tae-r.2	123150113	uncharacterized LOC123150113
tae-r.2	123092759	ABC transporter F family member 4
tae-r.2	123098051	ABC transporter F family member 4
hvu-r.1	123449148	nucleolar protein dao-5-like
hvu-r.1	123452875	serine/threonine-protein phosphatase 2A regulatory subunit psrA-like
ghi-r.1	121220020	uncharacterized LOC121220020
ghi-r.1	107957601	nucleolar protein dao-5
ghi-r.1	107943803	uncharacterized LOC107943803
bna-r.1	106375820	DNA ligase 1
bna-r.1	106347069	nucleolin
bna-r.1	106383019	uncharacterized LOC106383019
sbi-r.1	8066571	uncharacterized LOC8066571
sbi-r.1	8054337	uncharacterized LOC8054337
sot-r.1	102598684	neurofilament heavy polypeptide
sot-r.1	102584556	uncharacterized LOC102584556
cit-r.1	102609102	hypothetical protein
cit-r.1	102629837	uncharacterized LOC102629837
bdi-r.1	100838032	uncharacterized protein DDB_G0286299
bdi-r.1	100836865	uncharacterized LOC100836865
nta-r.1	107771839	uncharacterized LOC107771839
nta-r.1	107819107	uncharacterized LOC107819107
nta-r.1	107818148	uncharacterized LOC107818148

Top 50 coexpressed genes to CHLRE_08g375850v5 (cre-r.1 coexpression data)

KEGG ID	Pathway name	#genes in coex list	#genes in genome	-log10(p)	Link to the KEGG^* map (Multiple genes)

Top 50 enrichment test to CHLRE_08g375850v5 (cre-r.1 coexpression data)

CoexMap""

[Cytoscape]

Annotation

functional annotation

Function

uncharacterized protein

KEGG

GO BP

GO CC

GO MF

Protein

XP_001694269.2 [sequence] [blastp]

Subcellular
localization
wolf

nucl 10

(predict for XP_001694269.2)

Subcellular
localization
TargetP

other 9

(predict for XP_001694269.2)

Gene expression

All samples

[Expression pattern]

Tissue specificity^*

Coexpression

	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	Target	Reference
	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	cre-r.1 for CHLRE_08g375850v5	ath-u.5 for AT5G11600	ath-u.5 for AT1G19990	gma-u.5 for 100812528	gma-u.5 for 100801758	gma-u.5 for 100786782	sly-u.5 for 101263701	sly-u.5 for 101249523	osa-u.5 for 4332261	osa-u.5 for 4339819	zma-u.5 for 100276253	zma-u.5 for 100276864	bra-r.6 for 103850785	bra-r.6 for 103872806	vvi-u.5 for 100242110	vvi-u.5 for 100262893	ppo-u.5 for 7462302	ppo-u.5 for 7476703	ppo-u.5 for 7477674	mtr-u.5 for 11442507	mtr-u.5 for 25490132	tae-r.2 for 123150113	tae-r.2 for 123092759	tae-r.2 for 123098051	hvu-r.1 for 123449148	hvu-r.1 for 123452875	ghi-r.1 for 121220020	ghi-r.1 for 107957601	ghi-r.1 for 107943803	bna-r.1 for 106375820	bna-r.1 for 106347069	bna-r.1 for 106383019	sbi-r.1 for 8066571	sbi-r.1 for 8054337	sot-r.1 for 102598684	sot-r.1 for 102584556	cit-r.1 for 102609102	cit-r.1 for 102629837	bdi-r.1 for 100838032	bdi-r.1 for 100836865	nta-r.1 for 107771839	nta-r.1 for 107819107	nta-r.1 for 107818148

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Ortholog

Ortholog ID: 2844

Species

cre

ath

gma

sly

osa

zma

bra

vvi

ppo

mtr

tae

hvu

ghi

bna

sbi

sot

cit

bdi

nta

Symbol

Function^*

uncharacterized protein

nucleolin

uncharacterized LOC100786782

transcription initiation factor TFIID subunit 11

uncharacterized protein DDB_G0280579

uncharacterized LOC101263701

uncharacterized LOC101249523

uncharacterized LOC4332261

uncharacterized LOC4339819

uncharacterized LOC100276253

uncharacterized LOC100276864

uncharacterized LOC103850785

DNA ligase 1

uncharacterized LOC100242110

uncharacterized LOC100262893

uncharacterized LOC7462302

uncharacterized LOC7476703

uncharacterized LOC7477674

FACT complex subunit SSRP1

uncharacterized LOC25490132

uncharacterized LOC123150113

ABC transporter F family member 4

uncharacterized LOC123183432

nucleolar protein dao-5-like

serine/threonine-protein phosphatase 2A regulatory subunit psrA-like

nucleolar protein dao-5

uncharacterized LOC107943803

uncharacterized LOC107897101

DNA ligase 1

nucleolin

uncharacterized LOC106383019

uncharacterized LOC8066571

uncharacterized LOC8054337

neurofilament heavy polypeptide

uncharacterized LOC102584556

hypothetical protein

uncharacterized LOC102629837

uncharacterized protein DDB_G0286299

uncharacterized LOC100836865

uncharacterized LOC107819107

uncharacterized LOC107803927

uncharacterized LOC142166786

Coexmap

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Coexpression

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KEGG Info

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
cre03040	Spliceosome	6
cre03020	RNA polymerase	2
cre03420	Nucleotide excision repair	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ath03040	Spliceosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma04144	Endocytosis	2
gma03060	Protein export	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma04814	Motor proteins	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma03060	Protein export	2
gma03020	RNA polymerase	2
gma03420	Nucleotide excision repair	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sly03010	Ribosome	7
sly03008	Ribosome biogenesis in eukaryotes	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sly03060	Protein export	2
sly04141	Protein processing in endoplasmic reticulum	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
zma00190	Oxidative phosphorylation	4
zma04145	Phagosome	3
zma04144	Endocytosis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
zma03040	Spliceosome	4

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bra04120	Ubiquitin mediated proteolysis	4
bra04141	Protein processing in endoplasmic reticulum	3
bra04144	Endocytosis	2
bra03083	Polycomb repressive complex	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bra03010	Ribosome	16

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
vvi03010	Ribosome	6

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
vvi03010	Ribosome	11

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ppo00600	Sphingolipid metabolism	2
ppo04142	Lysosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ppo03040	Spliceosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
mtr03008	Ribosome biogenesis in eukaryotes	4
mtr03040	Spliceosome	2
mtr03010	Ribosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
mtr00909	Sesquiterpenoid and triterpenoid biosynthesis	2
mtr00410	beta-Alanine metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae04141	Protein processing in endoplasmic reticulum	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae03010	Ribosome	4

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae03013	Nucleocytoplasmic transport	2
tae03015	mRNA surveillance pathway	2
tae03040	Spliceosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
hvu03010	Ribosome	9

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
hvu03008	Ribosome biogenesis in eukaryotes	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi03010	Ribosome	6
ghi04120	Ubiquitin mediated proteolysis	5

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi04120	Ubiquitin mediated proteolysis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bna03018	RNA degradation	2
bna03040	Spliceosome	2
bna04517	IgSF CAM signaling	2
bna04814	Motor proteins	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sbi03008	Ribosome biogenesis in eukaryotes	2
sbi03010	Ribosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sot03040	Spliceosome	4
sot03008	Ribosome biogenesis in eukaryotes	3
sot03010	Ribosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sot00190	Oxidative phosphorylation	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bdi03008	Ribosome biogenesis in eukaryotes	3
bdi00340	Histidine metabolism	2
bdi01230	Biosynthesis of amino acids	2
bdi03010	Ribosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bdi04145	Phagosome	5
bdi04144	Endocytosis	4
bdi04148	Efferocytosis	4
bdi04141	Protein processing in endoplasmic reticulum	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta03015	mRNA surveillance pathway	2
nta04136	Autophagy - other	2
nta04382	Cornified envelope formation	2
nta04142	Lysosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta00600	Sphingolipid metabolism	4
nta04382	Cornified envelope formation	4

Expression

Expression pattern

Entrez Gene ID^*

5719946

831032

838588

100786782

100785675

100781174

101263701

101249523

4332261

4339819

100276253

100276864

103850785

103872806

100242110

100262893

7462302

7476703

7477674

11442507

25490132

123150113

123092759

123183432

123449148

123452875

107957601

107943803

107897101

106375820

106347069

106383019

8066571

8054337

102598684

102584556

102609102

102629837

100838032

100836865

107819107

107803927

142166786

The preparation time of this page was 0.3 [sec].


Species	cre	ath	gma	sly	osa	zma	bra	vvi	ppo	mtr	tae	hvu	ghi	bna	sbi	sot	cit	bdi	nta
Paralog	1	2	3	2	2	2	2	2	3	2	3	2	3	3	2	2	2	2	3

Select Species**

Orthologous genes in OrthoFinder**

Top 50 coexpressed genes to CHLRE_08g375850v5 (cre-r.1 coexpression data)

Top 50 enrichment test to CHLRE_08g375850v5 (cre-r.1 coexpression data)

Select Species^**

Orthologous genes in OrthoFinder^**