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Orthologous genes in OrthoFinder**

Species Gene Description
 cre-r.1   CHLRE_09g391652v5   uncharacterized protein 
 ath-u.5   AT2G18220   Noc2p family 
 gma-u.5   100786692   nucleolar complex protein 2 homolog 
 gma-u.5   100785698   nucleolar complex protein 2 homolog 
 sly-u.5   101257525   nucleolar complex-associated protein 2 
 osa-u.5   4349000   nucleolar complex protein 2 homolog 
 zma-u.5   100193047   uncharacterized LOC100193047 
 vvi-u.5   100247894   nucleolar complex-associated protein 2 
 ppo-u.5   7455764   nucleolar complex-associated protein 2 
 mtr-u.5   11431017   nucleolar complex protein 2 homolog 

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Top 50 coexpressed genes to CHLRE_09g391652v5 (cre-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to CHLRE_09g391652v5 (cre-r.1 coexpression data)

CoexMap"5720237"


creCHLRE_09g391652v5 | Entrez gene ID : 5720237    
Species cre ath gma sly osa zma vvi ppo mtr hvu sot tae nta bra cit ghi bna bdi sbi
Paralog 1 1 2 1 1 1 1 1 1 0 0 0 0 0 0 0 0 0 0
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0042273 [list] [network] ribosomal large subunit biogenesis  (52 genes)  IEA  
GO CC
GO:0030690 [list] [network] Noc1p-Noc2p complex  (1 genes)  IEA  
GO:0030691 [list] [network] Noc2p-Noc3p complex  (1 genes)  IEA  
GO:0005654 [list] [network] nucleoplasm  (152 genes)  IEA  
GO:0005730 [list] [network] nucleolus  (152 genes)  IEA  
GO MF
Protein XP_042921168.1 [sequence] [blastp]
Subcellular
localization
wolf
mito 4,  chlo 4,  nucl 1  (predict for XP_042921168.1)
Subcellular
localization
TargetP
mito 5,  chlo 3  (predict for XP_042921168.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

cre-r.1
for
CHLRE_09g391652v5

.
ath-u.5
for
AT2G18220

.
gma-u.5
for
100786692

.
gma-u.5
for
100785698

.
sly-u.5
for
101257525

.
osa-u.5
for
4349000

.
zma-u.5
for
100193047

.
vvi-u.5
for
100247894

.
ppo-u.5
for
7455764

.
mtr-u.5
for
11431017

.


Ortholog ID: 9986
Species ath gma gma sly osa zma bra vvi ppo mtr tae tae hvu ghi ghi bna bna cre sbi sot cit bdi nta nta
Symbol AT2G18220 LOC100786692 LOC100785698 LOC101257525 LOC4349000 LOC100193047 LOC103828411 LOC100247894 LOC7455764 LOC11431017 LOC123181158 LOC123122306 LOC123398714 LOC107893771 LOC107933811 LOC111203372 LOC106357727 CHLRE_09g391652v5 LOC8065812 LOC102599776 LOC102610858 LOC100825110 LOC107772222 LOC107790269
Function* Noc2p family nucleolar complex protein 2 homolog nucleolar complex protein 2 homolog nucleolar complex-associated protein 2 nucleolar complex protein 2 homolog uncharacterized LOC100193047 nucleolar complex protein 2 homolog nucleolar complex-associated protein 2 nucleolar complex-associated protein 2 nucleolar complex protein 2 homolog nucleolar complex protein 2 homolog nucleolar complex protein 2 homolog nucleolar complex protein 2 homolog nucleolar complex protein 2 homolog nucleolar complex protein 2 homolog nucleolar complex-associated protein 2 nucleolar complex-associated protein 2 uncharacterized protein nucleolar complex protein 2 homolog nucleolar complex protein 2 homolog nucleolar complex-associated protein 2 nucleolar complex protein 2 homolog nucleolar complex-associated protein 2 nucleolar complex-associated protein 2
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03008 Ribosome biogenesis in eukaryotes 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03008 Ribosome biogenesis in eukaryotes 3
gma03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03008 Ribosome biogenesis in eukaryotes 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03008 Ribosome biogenesis in eukaryotes 7
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03008 Ribosome biogenesis in eukaryotes 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03008 Ribosome biogenesis in eukaryotes 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03008 Ribosome biogenesis in eukaryotes 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03008 Ribosome biogenesis in eukaryotes 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03008 Ribosome biogenesis in eukaryotes 4
mtr03020 RNA polymerase 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03008 Ribosome biogenesis in eukaryotes 7
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03008 Ribosome biogenesis in eukaryotes 8
tae03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03008 Ribosome biogenesis in eukaryotes 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03008 Ribosome biogenesis in eukaryotes 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cre03008 Ribosome biogenesis in eukaryotes 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03008 Ribosome biogenesis in eukaryotes 6
sbi03020 RNA polymerase 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03082 ATP-dependent chromatin remodeling 2
sot03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03008 Ribosome biogenesis in eukaryotes 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03008 Ribosome biogenesis in eukaryotes 7
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03008 Ribosome biogenesis in eukaryotes 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 816337 100786692 100785698 101257525 4349000 100193047 103828411 100247894 7455764 11431017 123181158 123122306 123398714 107893771 107933811 111203372 106357727 5720237 8065812 102599776 102610858 100825110 107772222 107790269
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