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Orthologous genes in OrthoFinder**

Species Gene Description
 cre-r.1   CHLRE_09g402350v5   uncharacterized protein 
 ath-u.5   AT4G14490   SMAD/FHA domain-containing protein 
 gma-u.5   102668793   FHA domain-containing protein At4g14490 
 gma-u.5   102667282   uncharacterized LOC102667282 
 sly-u.5   101252421   FHA domain-containing protein At4g14490 
 osa-u.5   4333981   uncharacterized LOC4333981 
 zma-u.5   100281140   uncharacterized LOC100281140 
 zma-u.5   103643957   FHA domain-containing protein At4g14490 
 vvi-u.5   104879266   FHA domain-containing protein At4g14490 
 ppo-u.5   7498028   FHA domain-containing protein At4g14490 
 mtr-u.5   25493078   FHA domain-containing protein At4g14490 
 mtr-u.5   11421664   myb-like protein X 
 mtr-u.5   25501438   FHA domain-containing protein At4g14490 

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Top 50 coexpressed genes to CHLRE_09g402350v5 (cre-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to CHLRE_09g402350v5 (cre-r.1 coexpression data)

CoexMap"5720727"


creCHLRE_09g402350v5 | Entrez gene ID : 5720727      
Species cre ath gma sly osa zma vvi ppo mtr hvu sot tae nta bra cit ghi bna bdi sbi
Paralog 1 1 2 1 1 2 1 1 3 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO CC
GO MF
GO:0003729 [list] [network] mRNA binding  (109 genes)  IEA  
GO:0005515 [list] [network] protein binding  (1927 genes)  IEA  
Protein XP_001695116.1 [sequence] [blastp]
Subcellular
localization
wolf
mito 6,  cyto 2,  chlo 1  (predict for XP_001695116.1)
Subcellular
localization
TargetP
other 8  (predict for XP_001695116.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

cre-r.1
for
CHLRE_09g402350v5

.
ath-u.5
for
AT4G14490

.
gma-u.5
for
102668793

.
gma-u.5
for
102667282

.
sly-u.5
for
101252421

.
osa-u.5
for
4333981

.
zma-u.5
for
100281140

.
zma-u.5
for
103643957

.
vvi-u.5
for
104879266

.
ppo-u.5
for
7498028

.
mtr-u.5
for
25493078

.
mtr-u.5
for
11421664

.
mtr-u.5
for
25501438

.


Ortholog ID: 4552
Species ath gma gma sly osa zma zma bra vvi ppo mtr mtr tae tae hvu hvu ghi ghi bna cre sbi sot cit cit bdi bdi nta nta
Symbol AT4G14490 LOC102667282 LOC102668793 LOC101252421 LOC4333981 LOC100281140 LOC103643957 LOC103858957 LOC104879266 LOC7498028 LOC25493077 LOC25493078 LOC123069559 LOC123078047 LOC123410235 LOC123443394 LOC107940170 LOC107927648 LOC106438931 CHLRE_09g402350v5 LOC8059953 LOC102589470 LOC107178426 LOC102622206 LOC100831750 LOC100837059 LOC107773982 LOC107829477
Function* SMAD/FHA domain-containing protein uncharacterized LOC102667282 FHA domain-containing protein At4g14490 FHA domain-containing protein At4g14490 uncharacterized LOC4333981 uncharacterized LOC100281140 FHA domain-containing protein At4g14490 FHA domain-containing protein At4g14490 FHA domain-containing protein At4g14490 FHA domain-containing protein At4g14490 FHA domain-containing protein At4g14490 FHA domain-containing protein At4g14490 ABC transporter F family member 4 ABC transporter F family member 4-like uncharacterized LOC123410235 ABC transporter F family member 4-like FHA domain-containing protein At4g14490 FHA domain-containing protein At4g14490 FHA domain-containing protein At4g14490-like uncharacterized protein FHA domain-containing protein At4g14490 FHA domain-containing protein At4g14490 FHA domain-containing protein At4g14490-like FHA domain-containing protein At4g14490-like FHA domain-containing protein At4g14490 uncharacterized LOC100837059 uncharacterized LOC107773982 uncharacterized LOC107829477
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath04814 Motor proteins 7
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma04814 Motor proteins 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly04814 Motor proteins 3
sly03440 Homologous recombination 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma04814 Motor proteins 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma04814 Motor proteins 7
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra04814 Motor proteins 3
bra03030 DNA replication 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03030 DNA replication 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03030 DNA replication 8
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae04814 Motor proteins 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cre00240 Pyrimidine metabolism 2
cre01232 Nucleotide metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03460 Fanconi anemia pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit00270 Cysteine and methionine metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03040 Spliceosome 4
nta03015 mRNA surveillance pathway 4
nta03250 Viral life cycle - HIV-1 4
nta00270 Cysteine and methionine metabolism 2
nta04148 Efferocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03040 Spliceosome 4
nta03015 mRNA surveillance pathway 4
nta03250 Viral life cycle - HIV-1 4
nta00270 Cysteine and methionine metabolism 2
nta04148 Efferocytosis 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 827096 102667282 102668793 101252421 4333981 100281140 103643957 103858957 104879266 7498028 25493077 25493078 123069559 123078047 123410235 123443394 107940170 107927648 106438931 5720727 8059953 102589470 107178426 102622206 100831750 100837059 107773982 107829477
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