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Orthologous genes in OrthoFinder**

Species Gene Description
 cre-r.1   CHLRE_06g259600v5   uncharacterized protein 
 ath-u.5   HIT1   Membrane trafficking VPS53 family protein 
 ath-u.5   AT1G50970   Membrane trafficking VPS53 family protein 
 gma-u.5   100799852   vacuolar protein sorting-associated protein 53 A 
 gma-u.5   100791359   vacuolar protein sorting-associated protein 53 A 
 sly-u.5   101256582   vacuolar protein sorting-associated protein 53 A 
 osa-u.5   4324975   vacuolar protein sorting-associated protein 53 A 
 zma-u.5   100501884   uncharacterized LOC100501884 
 vvi-u.5   100251847   vacuolar protein sorting-associated protein 53 A 
 ppo-u.5   7455871   vacuolar protein sorting-associated protein 53 A 
 mtr-u.5   11409544   vacuolar protein sorting-associated protein 53 A 

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Top 50 coexpressed genes to CHLRE_06g259600v5 (cre-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to CHLRE_06g259600v5 (cre-r.1 coexpression data)

CoexMap"5722062"


creCHLRE_06g259600v5 | Entrez gene ID : 5722062      
Species cre ath gma sly osa zma vvi ppo mtr sbi nta bra hvu cit bdi sot tae bna ghi
Paralog 1 2 2 1 1 1 1 1 1 0 0 0 0 0 0 0 0 0 0
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0042147 [list] [network] retrograde transport, endosome to Golgi  (13 genes)  IEA  
GO CC
GO:0000938 [list] [network] GARP complex  (4 genes)  IEA  
GO MF
Protein XP_042923476.1 [sequence] [blastp]
Subcellular
localization
wolf
chlo 9  (predict for XP_042923476.1)
Subcellular
localization
TargetP
chlo 8  (predict for XP_042923476.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

cre-r.1
for
CHLRE_06g259600v5

.
ath-u.5
for
HIT1

.
ath-u.5
for
AT1G50970

.
gma-u.5
for
100799852

.
gma-u.5
for
100791359

.
sly-u.5
for
101256582

.
osa-u.5
for
4324975

.
zma-u.5
for
100501884

.
vvi-u.5
for
100251847

.
ppo-u.5
for
7455871

.
mtr-u.5
for
11409544

.


Ortholog ID: 9837
Species ath ath gma gma sly osa zma bra vvi ppo mtr tae tae hvu ghi ghi bna bna cre sbi sot cit bdi nta nta
Symbol HIT1 AT1G50970 LOC100791359 LOC100799852 LOC101256582 LOC4324975 LOC100501884 LOC103868618 LOC100251847 LOC7455871 LOC11409544 LOC123062804 LOC123079982 LOC123445010 LOC107886392 LOC107920334 LOC106415510 LOC106451660 CHLRE_06g259600v5 LOC8056136 LOC102584559 LOC102630431 LOC100826427 LOC107760155 LOC107794431
Function* Membrane trafficking VPS53 family protein Membrane trafficking VPS53 family protein vacuolar protein sorting-associated protein 53 A vacuolar protein sorting-associated protein 53 A vacuolar protein sorting-associated protein 53 A vacuolar protein sorting-associated protein 53 A uncharacterized LOC100501884 vacuolar protein sorting-associated protein 53 A vacuolar protein sorting-associated protein 53 A vacuolar protein sorting-associated protein 53 A vacuolar protein sorting-associated protein 53 A vacuolar protein sorting-associated protein 53 A vacuolar protein sorting-associated protein 53 A vacuolar protein sorting-associated protein 53 A vacuolar protein sorting-associated protein 53 A vacuolar protein sorting-associated protein 53 A vacuolar protein sorting-associated protein 53 A vacuolar protein sorting-associated protein 53 A uncharacterized protein vacuolar protein sorting-associated protein 53 A vacuolar protein sorting-associated protein 53 A vacuolar protein sorting-associated protein 53 A vacuolar protein sorting-associated protein 53 A vacuolar protein sorting-associated protein 53 A vacuolar protein sorting-associated protein 53 A
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath04144 Endocytosis 5
ath04142 Lysosome 3
ath00562 Inositol phosphate metabolism 2
ath05100 Bacterial invasion of epithelial cells 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03040 Spliceosome 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma04144 Endocytosis 4
gma05100 Bacterial invasion of epithelial cells 3
gma04142 Lysosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma04142 Lysosome 2
gma04144 Endocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly04144 Endocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa04142 Lysosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma04141 Protein processing in endoplasmic reticulum 4
zma04144 Endocytosis 3
zma04142 Lysosome 2
zma05100 Bacterial invasion of epithelial cells 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo04142 Lysosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae04142 Lysosome 8
tae04144 Endocytosis 6
tae05100 Bacterial invasion of epithelial cells 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae04142 Lysosome 5
tae04144 Endocytosis 5
tae05100 Bacterial invasion of epithelial cells 4
tae04141 Protein processing in endoplasmic reticulum 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu04144 Endocytosis 3
hvu04142 Lysosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi04144 Endocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi04144 Endocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00240 Pyrimidine metabolism 2
bna01232 Nucleotide metabolism 2
bna03440 Homologous recombination 2
bna04141 Protein processing in endoplasmic reticulum 2
bna04144 Endocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00240 Pyrimidine metabolism 2
bna01232 Nucleotide metabolism 2
bna03440 Homologous recombination 2
bna04141 Protein processing in endoplasmic reticulum 2
bna04144 Endocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cre04142 Lysosome 4
cre04144 Endocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot04141 Protein processing in endoplasmic reticulum 3
sot04144 Endocytosis 3
sot05100 Bacterial invasion of epithelial cells 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03022 Basal transcription factors 2
cit03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi04142 Lysosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00563 Glycosylphosphatidylinositol (GPI)-anchor biosynthesis 2
nta04144 Endocytosis 2
nta00510 N-Glycan biosynthesis 2
nta00513 Various types of N-glycan biosynthesis 2
nta04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00510 N-Glycan biosynthesis 3
nta00513 Various types of N-glycan biosynthesis 3
nta04141 Protein processing in endoplasmic reticulum 3
nta00563 Glycosylphosphatidylinositol (GPI)-anchor biosynthesis 2
nta04144 Endocytosis 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 841472 841519 100791359 100799852 101256582 4324975 100501884 103868618 100251847 7455871 11409544 123062804 123079982 123445010 107886392 107920334 106415510 106451660 5722062 8056136 102584559 102630431 100826427 107760155 107794431
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