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Orthologous genes in OrthoFinder**

Species Gene Description
 cre-r.1   CHLRE_06g249150v5   uncharacterized protein 
 ath-u.5   MKK3   mitogen-activated protein kinase kinase 3 
 gma-u.5   100784935   mitogen-activated protein kinase kinase 3 
 gma-u.5   100820176   mitogen-activated protein kinase kinase 3 
 sly-u.5   101252056   mitogen-activated protein kinase kinase 3 
 osa-u.5   9267453   mitogen-activated protein kinase kinase 3 
 zma-u.5   103628009   mitogen-activated protein kinase kinase 3 
 zma-u.5   100194228   Mitogen-activated protein kinase kinase 3 
 vvi-u.5   100257776   mitogen-activated protein kinase kinase 3 
 ppo-u.5   7487872   mitogen-activated protein kinase kinase 3 
 mtr-u.5   11418727   mitogen-activated protein kinase kinase 3 

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Top 50 coexpressed genes to CHLRE_06g249150v5 (cre-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to CHLRE_06g249150v5 (cre-r.1 coexpression data)

CoexMap"5722233"


creCHLRE_06g249150v5 | Entrez gene ID : 5722233      
Species cre ath gma sly osa zma vvi ppo mtr sbi nta bra hvu cit bdi sot tae bna ghi
Paralog 1 1 2 1 1 2 1 1 1 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG cre04016 [list] [network] MAPK signaling pathway - plant (29 genes)
GO BP
GO:0000165 [list] [network] MAPK cascade  (2 genes)  IEA  
GO:0006468 [list] [network] protein phosphorylation  (662 genes)  IEA  
GO CC
GO MF
GO:0004708 [list] [network] MAP kinase kinase activity  (2 genes)  IEA  
GO:0005524 [list] [network] ATP binding  (1223 genes)  IEA  
Protein XP_001696437.1 [sequence] [blastp]
Subcellular
localization
wolf
cyto 6,  chlo 3,  cyto_pero 3,  cyto_E.R. 3,  cyto_plas 3  (predict for XP_001696437.1)
Subcellular
localization
TargetP
other 8  (predict for XP_001696437.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

cre-r.1
for
CHLRE_06g249150v5

.
ath-u.5
for
MKK3

.
gma-u.5
for
100784935

.
gma-u.5
for
100820176

.
sly-u.5
for
101252056

.
osa-u.5
for
9267453

.
zma-u.5
for
103628009

.
zma-u.5
for
100194228

.
vvi-u.5
for
100257776

.
ppo-u.5
for
7487872

.
mtr-u.5
for
11418727

.


Ortholog ID: 8172
Species ath gma gma sly osa zma zma bra vvi ppo mtr tae tae hvu hvu ghi ghi bna bna cre sbi sot cit bdi bdi nta nta
Symbol MKK3 LOC100784935 LOC100820176 LOC101252056 LOC9267453 LOC100194228 LOC103628009 LOC103863991 LOC100257776 LOC7487872 LOC11418727 LOC123176294 LOC123123894 LOC123395238 LOC123395243 LOC107911772 LOC107924381 LOC106446164 LOC106391030 CHLRE_06g249150v5 LOC110436940 LOC102603964 LOC102621743 MKK3-1 MKK3-2 LOC107767392 LOC107811474
Function* mitogen-activated protein kinase kinase 3 mitogen-activated protein kinase kinase 3 mitogen-activated protein kinase kinase 3 mitogen-activated protein kinase kinase 3 mitogen-activated protein kinase kinase 3 Mitogen-activated protein kinase kinase 3 mitogen-activated protein kinase kinase 3 mitogen-activated protein kinase kinase 3 mitogen-activated protein kinase kinase 3 mitogen-activated protein kinase kinase 3 mitogen-activated protein kinase kinase 3 mitogen-activated protein kinase kinase 3 mitogen-activated protein kinase kinase 3 mitogen-activated protein kinase kinase 3-like mitogen-activated protein kinase kinase 3-like mitogen-activated protein kinase kinase 3-like mitogen-activated protein kinase kinase 3 mitogen-activated protein kinase kinase 3-like mitogen-activated protein kinase kinase 3 uncharacterized protein mitogen-activated protein kinase kinase 3 mitogen-activated protein kinase kinase 3 mitogen-activated protein kinase kinase 3 mitogen-activated protein kinase kinase 6-like mitogen-activated protein kinase kinase 6-like mitogen-activated protein kinase kinase 3 mitogen-activated protein kinase kinase 3-like
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath04144 Endocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma04120 Ubiquitin mediated proteolysis 5
gma04136 Autophagy - other 2
gma04016 MAPK signaling pathway - plant 2
gma04148 Efferocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma04120 Ubiquitin mediated proteolysis 4
gma04016 MAPK signaling pathway - plant 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03083 Polycomb repressive complex 4
osa03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03015 mRNA surveillance pathway 4
zma04382 Cornified envelope formation 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03008 Ribosome biogenesis in eukaryotes 2
bra04712 Circadian rhythm - plant 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo04144 Endocytosis 3
ppo04517 IgSF CAM signaling 3
ppo05100 Bacterial invasion of epithelial cells 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae04141 Protein processing in endoplasmic reticulum 4
tae04016 MAPK signaling pathway - plant 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae04148 Efferocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu04016 MAPK signaling pathway - plant 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu04016 MAPK signaling pathway - plant 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi04141 Protein processing in endoplasmic reticulum 4
ghi04016 MAPK signaling pathway - plant 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi04141 Protein processing in endoplasmic reticulum 4
ghi04016 MAPK signaling pathway - plant 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00380 Tryptophan metabolism 2
bna04016 MAPK signaling pathway - plant 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00380 Tryptophan metabolism 2
bna04016 MAPK signaling pathway - plant 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cre04016 MAPK signaling pathway - plant 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03022 Basal transcription factors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi04016 MAPK signaling pathway - plant 2
bdi04146 Peroxisome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi04016 MAPK signaling pathway - plant 2
bdi04146 Peroxisome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03040 Spliceosome 2
nta04016 MAPK signaling pathway - plant 2
nta04146 Peroxisome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta04016 MAPK signaling pathway - plant 2
nta04146 Peroxisome 2
nta00240 Pyrimidine metabolism 2
nta00760 Nicotinate and nicotinamide metabolism 2
nta01232 Nucleotide metabolism 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 834042 100784935 100820176 101252056 9267453 100194228 103628009 103863991 100257776 7487872 11418727 123176294 123123894 123395238 123395243 107911772 107924381 106446164 106391030 5722233 110436940 102603964 102621743 100845133 100824666 107767392 107811474
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