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Orthologous genes in OrthoFinder**

Species Gene Description
 cre-r.1   CHLRE_09g412450v5   uncharacterized protein 
 ath-u.5   SYN3   Rad21/Rec8-like family protein 
 gma-u.5   102661287   sister chromatid cohesion 1 protein 3 
 sly-u.5   101261453   sister chromatid cohesion 1 protein 3 
 osa-u.5   4345123   sister chromatid cohesion 1 protein 3 
 zma-u.5   100304299   Sister chromatid cohesion 1 protein 3 
 mtr-u.5   11427949   sister chromatid cohesion 1 protein 3 

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Top 50 coexpressed genes to CHLRE_09g412450v5 (cre-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to CHLRE_09g412450v5 (cre-r.1 coexpression data)

CoexMap"5722308"


creCHLRE_09g412450v5 | Entrez gene ID : 5722308    
Species cre ath gma sly osa zma mtr sbi nta bra vvi cit hvu ppo bdi sot tae bna ghi
Paralog 1 1 1 1 1 1 1 0 0 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0007130 [list] [network] synaptonemal complex assembly  (4 genes)  IEA  
GO:1990414 [list] [network] replication-born double-strand break repair via sister chromatid exchange  (6 genes)  IEA  
GO:0007064 [list] [network] mitotic sister chromatid cohesion  (15 genes)  IEA  
GO CC
GO:0000795 [list] [network] synaptonemal complex  (4 genes)  IEA  
GO:0008278 [list] [network] cohesin complex  (7 genes)  IEA  
GO MF
GO:0003682 [list] [network] chromatin binding  (81 genes)  IEA  
GO:0005515 [list] [network] protein binding  (1927 genes)  IEA  
Protein XP_042921594.1 [sequence] [blastp]
Subcellular
localization
wolf
cyto 5,  chlo 2,  nucl 2  (predict for XP_042921594.1)
Subcellular
localization
TargetP
mito 5,  other 3  (predict for XP_042921594.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

cre-r.1
for
CHLRE_09g412450v5

.
ath-u.5
for
SYN3

.
gma-u.5
for
102661287

.
sly-u.5
for
101261453

.
osa-u.5
for
4345123

.
zma-u.5
for
100304299

.
mtr-u.5
for
11427949

.


Ortholog ID: 7261
Species ath gma sly osa zma bra mtr tae hvu ghi ghi cre sbi sbi sot cit bdi bdi nta nta
Symbol SYN3 LOC102661287 LOC101261453 LOC4345123 LOC100304299 LOC103841802 LOC11427949 LOC123112722 LOC123399949 LOC107918899 LOC107926156 CHLRE_09g412450v5 LOC8073290 LOC8073293 LOC102579304 LOC102607852 LOC100832047 LOC100840434 LOC107789894 LOC107804798
Function* Rad21/Rec8-like family protein sister chromatid cohesion 1 protein 3 sister chromatid cohesion 1 protein 3 sister chromatid cohesion 1 protein 3 Sister chromatid cohesion 1 protein 3 sister chromatid cohesion 1 protein 3 sister chromatid cohesion 1 protein 3 sister chromatid cohesion 1 protein 3 sister chromatid cohesion 1 protein 3-like sister chromatid cohesion 1 protein 3 sister chromatid cohesion 1 protein 3 uncharacterized protein sister chromatid cohesion 1 protein 3 sister chromatid cohesion 1 protein 3 sister chromatid cohesion 1 protein 3 sister chromatid cohesion 1 protein 3 sister chromatid cohesion 1 protein 3 uncharacterized LOC100840434 sister chromatid cohesion 1 protein 3-like sister chromatid cohesion 1 protein 3-like
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03460 Fanconi anemia pathway 5
ath03440 Homologous recombination 5
ath03030 DNA replication 5
ath03420 Nucleotide excision repair 3
ath03430 Mismatch repair 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03030 DNA replication 7
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03030 DNA replication 9
sly03440 Homologous recombination 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03030 DNA replication 7
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03030 DNA replication 13
zma03420 Nucleotide excision repair 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03030 DNA replication 6
bra03420 Nucleotide excision repair 4
bra03430 Mismatch repair 4
bra03440 Homologous recombination 4
bra03460 Fanconi anemia pathway 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03030 DNA replication 8
mtr03430 Mismatch repair 3
mtr03420 Nucleotide excision repair 2
mtr00230 Purine metabolism 2
mtr00240 Pyrimidine metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03030 DNA replication 8
tae03420 Nucleotide excision repair 4
tae03430 Mismatch repair 3
tae03440 Homologous recombination 3
tae03460 Fanconi anemia pathway 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03030 DNA replication 8
ghi03420 Nucleotide excision repair 2
ghi03430 Mismatch repair 2
ghi03440 Homologous recombination 2
ghi03460 Fanconi anemia pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03030 DNA replication 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cre03030 DNA replication 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03030 DNA replication 10
sbi03460 Fanconi anemia pathway 4
sbi03440 Homologous recombination 3
sbi03420 Nucleotide excision repair 2
sbi03430 Mismatch repair 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03030 DNA replication 5
sot03440 Homologous recombination 2
sot03460 Fanconi anemia pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03030 DNA replication 6
bdi03440 Homologous recombination 4
bdi03460 Fanconi anemia pathway 3
bdi03430 Mismatch repair 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00230 Purine metabolism 4
nta00240 Pyrimidine metabolism 4
nta00480 Glutathione metabolism 4
nta01232 Nucleotide metabolism 4
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 825124 102661287 101261453 4345123 100304299 103841802 11427949 123112722 123399949 107918899 107926156 5722308 8073290 8073293 102579304 102607852 100832047 100840434 107789894 107804798
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