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Orthologous genes in OrthoFinder**

Species Gene Description
 cre-r.1   CHLRE_12g524350v5   uncharacterized protein 
 gma-u.5   100790963   checkpoint protein hus1 
 osa-u.5   4336469   uncharacterized LOC4336469 
 zma-u.5   100282451   hus1-like protein 
 bra-r.6   103868496   uncharacterized LOC103868496 
 vvi-u.5   100266426   Hus1-like protein 
 ppo-u.5   18094866   uncharacterized LOC18094866 
 mtr-u.5   11408723   uncharacterized LOC11408723 
 ghi-r.1   107962145   uncharacterized LOC107962145 
 ghi-r.1   107901791   uncharacterized LOC107901791 
 bna-r.1   125609495   uncharacterized LOC125609495 
 bna-r.1   BNAC06G09750D   uncharacterized BNAC06G09750D 
 bna-r.1   106445723   uncharacterized LOC106445723 
 sot-r.1   102585546   uncharacterized LOC102585546 
 cit-r.1   102614578   uncharacterized LOC102614578 
 bdi-r.1   100831912   uncharacterized LOC100831912 
 nta-r.1   107819846   uncharacterized LOC107819846 
 nta-r.1   107788834   uncharacterized LOC107788834 

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Top 50 coexpressed genes to CHLRE_12g524350v5 (cre-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to CHLRE_12g524350v5 (cre-r.1 coexpression data)

CoexMap"5722521"


creCHLRE_12g524350v5 | Entrez gene ID : 5722521      
Species cre gma osa zma bra vvi ppo mtr ghi bna sot cit bdi nta sly tae sbi hvu ath
Paralog 1 1 1 1 1 1 1 1 2 3 1 1 1 2 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0044778 [list] [network] meiotic DNA integrity checkpoint signaling  (1 genes)  IEA  
GO:0031573 [list] [network] mitotic intra-S DNA damage checkpoint signaling  (4 genes)  IEA  
GO:0033314 [list] [network] mitotic DNA replication checkpoint signaling  (8 genes)  IEA  
GO:0006289 [list] [network] nucleotide-excision repair  (28 genes)  IEA  
GO:0000723 [list] [network] telomere maintenance  (30 genes)  IEA  
GO:0000724 [list] [network] double-strand break repair via homologous recombination  (82 genes)  IEA  
GO CC
GO:0030896 [list] [network] checkpoint clamp complex  (3 genes)  IEA  
GO:0035861 [list] [network] site of double-strand break  (11 genes)  IEA  
GO:0005730 [list] [network] nucleolus  (152 genes)  IEA  
GO MF
Protein XP_001696902.2 [sequence] [blastp]
Subcellular
localization
wolf
cyto 4,  chlo 2,  pero 2,  nucl 1,  chlo_mito 1  (predict for XP_001696902.2)
Subcellular
localization
TargetP
other 8,  mito 5  (predict for XP_001696902.2)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

cre-r.1
for
CHLRE_12g524350v5
gma-u.5
for
100790963
osa-u.5
for
4336469
zma-u.5
for
100282451
bra-r.6
for
103868496
vvi-u.5
for
100266426
ppo-u.5
for
18094866
mtr-u.5
for
11408723
ghi-r.1
for
107962145
ghi-r.1
for
107901791
bna-r.1
for
125609495
bna-r.1
for
BNAC06G09750D
bna-r.1
for
106445723
sot-r.1
for
102585546
cit-r.1
for
102614578
bdi-r.1
for
100831912
nta-r.1
for
107819846
nta-r.1
for
107788834


Ortholog ID: 7839
Species cre gma osa zma bra vvi ppo mtr ghi ghi bna bna bna sot cit bdi nta nta
Symbol CHLRE_12g524350v5 LOC100790963 LOC4336469 LOC100282451 LOC103868496 LOC100266426 LOC18094866 LOC11408723 LOC107962145 LOC107901791 LOC125609495 BNAC06G09750D LOC106445723 LOC102585546 LOC102614578 LOC100831912 LOC107819846 LOC107788834
Function* uncharacterized protein checkpoint protein hus1 uncharacterized LOC4336469 hus1-like protein uncharacterized LOC103868496 Hus1-like protein uncharacterized LOC18094866 uncharacterized LOC11408723 uncharacterized LOC107962145 uncharacterized LOC107901791 uncharacterized LOC125609495 uncharacterized BNAC06G09750D uncharacterized LOC106445723 uncharacterized LOC102585546 uncharacterized LOC102614578 uncharacterized LOC100831912 uncharacterized LOC107819846 uncharacterized LOC107788834
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cre03013 Nucleocytoplasmic transport 3
cre04144 Endocytosis 2
cre03410 Base excision repair 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03050 Proteasome 3
gma04712 Circadian rhythm - plant 2
gma03250 Viral life cycle - HIV-1 2
gma03272 Virion - Hepatitis viruses 2
gma04144 Endocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03030 DNA replication 4
bra03410 Base excision repair 2
bra03420 Nucleotide excision repair 2
bra03430 Mismatch repair 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi00061 Fatty acid biosynthesis 2
vvi01212 Fatty acid metabolism 2
vvi01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03010 Ribosome 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03082 ATP-dependent chromatin remodeling 2
mtr03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03040 Spliceosome 8
ghi00100 Steroid biosynthesis 2
ghi04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03040 Spliceosome 8
ghi00100 Steroid biosynthesis 2
ghi04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03030 DNA replication 8
sot03410 Base excision repair 2
sot03420 Nucleotide excision repair 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03010 Ribosome 4
cit03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00230 Purine metabolism 2
nta00670 One carbon pool by folate 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 5722521 100790963 4336469 100282451 103868496 100266426 18094866 11408723 107962145 107901791 125609495 106402412 106445723 102585546 102614578 100831912 107819846 107788834
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