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Orthologous genes in OrthoFinder**

Species Gene Description
 cre-r.1   CHLRE_11g476800v5   uncharacterized protein 
 ath-u.5   AT5G64670   Ribosomal protein L18e/L15 superfamily protein 
 gma-u.5   102667246   54S ribosomal protein L10, mitochondrial 
 gma-u.5   100809931   50S ribosomal protein L15 
 gma-u.5   100792247   50S ribosomal protein L15 
 sly-u.5   101266474   uncharacterized LOC101266474 
 osa-u.5   4345238   uncharacterized LOC4345238 
 zma-u.5   100191689   uncharacterized LOC100191689 
 vvi-u.5   100251266   54S ribosomal protein L10, mitochondrial 
 ppo-u.5   18105988   uncharacterized LOC18105988 
 ppo-u.5   7461626   uncharacterized LOC7461626 
 mtr-u.5   25494061   50S ribosomal protein L15 
 mtr-u.5   25484720   50S ribosomal protein L15 
 mtr-u.5   25482510   50S ribosomal protein L15 

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Top 50 coexpressed genes to CHLRE_11g476800v5 (cre-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to CHLRE_11g476800v5 (cre-r.1 coexpression data)

CoexMap"5722855"


creCHLRE_11g476800v5 | Entrez gene ID : 5722855      
Species cre ath gma sly osa zma vvi ppo mtr sbi nta bra hvu cit bdi sot tae bna ghi
Paralog 1 1 3 1 1 1 1 2 3 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG cre03010 [list] [network] Ribosome (149 genes)
GO BP
GO:0006412 [list] [network] translation  (268 genes)  IEA  
GO CC
GO:0005762 [list] [network] mitochondrial large ribosomal subunit  (16 genes)  IEA  
GO MF
GO:0003735 [list] [network] structural constituent of ribosome  (164 genes)  IEA  
Protein XP_042919645.1 [sequence] [blastp]
Subcellular
localization
wolf
chlo 8,  mito 1  (predict for XP_042919645.1)
Subcellular
localization
TargetP
chlo 4,  mito 3  (predict for XP_042919645.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

cre-r.1
for
CHLRE_11g476800v5

.
ath-u.5
for
AT5G64670

.
gma-u.5
for
102667246

.
gma-u.5
for
100809931

.
gma-u.5
for
100792247

.
sly-u.5
for
101266474

.
osa-u.5
for
4345238

.
zma-u.5
for
100191689

.
vvi-u.5
for
100251266

.
ppo-u.5
for
18105988

.
ppo-u.5
for
7461626

.
mtr-u.5
for
25494061

.
mtr-u.5
for
25484720

.
mtr-u.5
for
25482510

.


Ortholog ID: 7010
Species ath gma gma sly osa zma bra bra vvi ppo ppo mtr mtr tae tae hvu ghi ghi bna bna cre sbi sot cit bdi nta nta
Symbol AT5G64670 LOC100792247 LOC100809931 LOC101266474 LOC4345238 LOC100191689 LOC103873893 LOC103837542 LOC100251266 LOC18105988 LOC7461626 LOC25482510 LOC25494061 LOC123078983 LOC123070581 LOC123444105 LOC107949011 LOC107898874 LOC106402447 LOC106371732 CHLRE_11g476800v5 LOC8078164 LOC102588688 LOC102621216 LOC100828109 LOC107804600 LOC107795949
Function* Ribosomal protein L18e/L15 superfamily protein 50S ribosomal protein L15 50S ribosomal protein L15 uncharacterized LOC101266474 uncharacterized LOC4345238 uncharacterized LOC100191689 50S ribosomal protein L15 50S ribosomal protein L15 54S ribosomal protein L10, mitochondrial uncharacterized LOC18105988 uncharacterized LOC7461626 50S ribosomal protein L15 50S ribosomal protein L15 50S ribosomal protein L15 50S ribosomal protein L15 50S ribosomal protein L15 50S ribosomal protein L15 50S ribosomal protein L15 50S ribosomal protein L15 50S ribosomal protein L15 uncharacterized protein 50S ribosomal protein L15 50S ribosomal protein L15 uncharacterized LOC102621216 50S ribosomal protein L15 uncharacterized LOC107804600 uncharacterized LOC107795949
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03010 Ribosome 11
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03010 Ribosome 7
gma00061 Fatty acid biosynthesis 2
gma00780 Biotin metabolism 2
gma01212 Fatty acid metabolism 2
gma01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03010 Ribosome 10
gma01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03010 Ribosome 17
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03010 Ribosome 7
osa03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03010 Ribosome 13
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03010 Ribosome 7
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03010 Ribosome 13
bra00970 Aminoacyl-tRNA biosynthesis 2
bra01230 Biosynthesis of amino acids 2
bra03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03010 Ribosome 12
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03010 Ribosome 2
ppo03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03010 Ribosome 3
ppo01230 Biosynthesis of amino acids 2
ppo04626 Plant-pathogen interaction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03010 Ribosome 8
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03010 Ribosome 16
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03010 Ribosome 17
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03010 Ribosome 9
tae03008 Ribosome biogenesis in eukaryotes 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03010 Ribosome 5
hvu01230 Biosynthesis of amino acids 2
hvu04146 Peroxisome 2
hvu03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03010 Ribosome 16
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03010 Ribosome 14
ghi00630 Glyoxylate and dicarboxylate metabolism 2
ghi00650 Butanoate metabolism 2
ghi01200 Carbon metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03010 Ribosome 10
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03010 Ribosome 9
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cre03010 Ribosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03010 Ribosome 8
sbi00190 Oxidative phosphorylation 8
sbi04148 Efferocytosis 2
sbi00020 Citrate cycle (TCA cycle) 2
sbi01200 Carbon metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03010 Ribosome 9
sot00020 Citrate cycle (TCA cycle) 2
sot00270 Cysteine and methionine metabolism 2
sot00566 Sulfoquinovose metabolism 2
sot00620 Pyruvate metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03010 Ribosome 15
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03010 Ribosome 5
bdi00230 Purine metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03010 Ribosome 7
nta00130 Ubiquinone and other terpenoid-quinone biosynthesis 2
nta01240 Biosynthesis of cofactors 2
nta00190 Oxidative phosphorylation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00190 Oxidative phosphorylation 4
nta03010 Ribosome 4
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 836588 100792247 100809931 101266474 4345238 100191689 103873893 103837542 100251266 18105988 7461626 25482510 25494061 123078983 123070581 123444105 107949011 107898874 106402447 106371732 5722855 8078164 102588688 102621216 100828109 107804600 107795949
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