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Orthologous genes in OrthoFinder**

Species Gene Description
 cre-r.1   CHLRE_11g480800v5   uncharacterized protein 
 ath-u.5   MEE21   PIN domain-like family protein 
 gma-u.5   100806716   rRNA-processing protein UTP23 homolog 
 gma-u.5   100778980   rRNA-processing protein UTP23 homolog 
 sly-u.5   101253809   uncharacterized LOC101253809 
 osa-u.5   4329331   uncharacterized LOC4329331 
 zma-u.5   100272500   uncharacterized LOC100272500 
 vvi-u.5   100251430   uncharacterized LOC100251430 
 ppo-u.5   18098071   uncharacterized LOC18098071 
 mtr-u.5   11422669   rRNA-processing protein UTP23 homolog 
 mtr-u.5   11426314   rRNA-processing protein UTP23 homolog 

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Top 50 coexpressed genes to CHLRE_11g480800v5 (cre-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to CHLRE_11g480800v5 (cre-r.1 coexpression data)

CoexMap"5722931"


creCHLRE_11g480800v5 | Entrez gene ID : 5722931    
Species cre ath gma sly osa zma vvi ppo mtr hvu sot tae nta bra cit ghi bna bdi sbi
Paralog 1 1 2 1 1 1 1 1 2 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO CC
GO:0032040 [list] [network] small-subunit processome  (35 genes)  IEA  
GO:0005730 [list] [network] nucleolus  (152 genes)  IEA  
GO MF
GO:0070181 [list] [network] small ribosomal subunit rRNA binding  (8 genes)  IEA  
Protein XP_042919736.1 [sequence] [blastp]
Subcellular
localization
wolf
chlo 3,  mito 3,  chlo_mito 3,  nucl 2  (predict for XP_042919736.1)
Subcellular
localization
TargetP
mito 8  (predict for XP_042919736.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

cre-r.1
for
CHLRE_11g480800v5

.
ath-u.5
for
MEE21

.
gma-u.5
for
100806716

.
gma-u.5
for
100778980

.
sly-u.5
for
101253809

.
osa-u.5
for
4329331

.
zma-u.5
for
100272500

.
vvi-u.5
for
100251430

.
ppo-u.5
for
18098071

.
mtr-u.5
for
11422669

.
mtr-u.5
for
11426314

.


Ortholog ID: 6827
Species ath gma gma sly osa zma bra vvi ppo mtr mtr hvu ghi ghi bna bna cre sbi sot sot cit bdi nta nta
Symbol MEE21 LOC100806716 LOC100778980 LOC101253809 LOC4329331 LOC100272500 LOC103857537 LOC100251430 LOC18098071 LOC11426314 LOC11422669 LOC123397879 LOC107911750 LOC107922761 LOC106437825 LOC106406871 CHLRE_11g480800v5 LOC8066937 LOC102593911 LOC102599318 LOC102628095 LOC100834409 LOC107789618 LOC107828412
Function* PIN domain-like family protein rRNA-processing protein UTP23 homolog rRNA-processing protein UTP23 homolog uncharacterized LOC101253809 uncharacterized LOC4329331 uncharacterized LOC100272500 rRNA-processing protein UTP23 homolog uncharacterized LOC100251430 uncharacterized LOC18098071 rRNA-processing protein UTP23 homolog rRNA-processing protein UTP23 homolog rRNA-processing protein UTP23 homolog rRNA-processing protein UTP23 homolog rRNA-processing protein UTP23 homolog rRNA-processing protein UTP23 homolog rRNA-processing protein UTP23 homolog uncharacterized protein rRNA-processing protein UTP23 homolog rRNA-processing protein UTP23 homolog rRNA-processing protein UTP23 homolog uncharacterized LOC102628095 rRNA-processing protein UTP23 homolog uncharacterized LOC107789618 uncharacterized LOC107828412
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03010 Ribosome 7
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03010 Ribosome 6
gma03008 Ribosome biogenesis in eukaryotes 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03010 Ribosome 3
sly03008 Ribosome biogenesis in eukaryotes 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03008 Ribosome biogenesis in eukaryotes 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03008 Ribosome biogenesis in eukaryotes 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03008 Ribosome biogenesis in eukaryotes 6
bra03010 Ribosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03008 Ribosome biogenesis in eukaryotes 4
ppo03010 Ribosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03010 Ribosome 8
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03040 Spliceosome 3
mtr03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03010 Ribosome 11
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03008 Ribosome biogenesis in eukaryotes 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03008 Ribosome biogenesis in eukaryotes 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cre03008 Ribosome biogenesis in eukaryotes 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03013 Nucleocytoplasmic transport 2
sbi03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03008 Ribosome biogenesis in eukaryotes 2
sot03010 Ribosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03010 Ribosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03008 Ribosome biogenesis in eukaryotes 3
cit03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03010 Ribosome 5
bdi03008 Ribosome biogenesis in eukaryotes 3
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 818021 100806716 100778980 101253809 4329331 100272500 103857537 100251430 18098071 11426314 11422669 123397879 107911750 107922761 106437825 106406871 5722931 8066937 102593911 102599318 102628095 100834409 107789618 107828412
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