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Orthologous genes in OrthoFinder**

Species Gene Description
 cre-r.1   CHLRE_03g160300v5   uncharacterized protein 
 ath-u.5   AT1G27330   Ribosome associated membrane protein RAMP4 
 ath-u.5   AT1G27350   Ribosome associated membrane protein RAMP4 
 gma-u.5   100820262   probable stress-associated endoplasmic reticulum protein 
 gma-u.5   100801005   stress-associated endoplasmic reticulum protein 2 
 gma-u.5   100781458   probable stress-associated endoplasmic reticulum protein 
 sly-u.5   101246823   uncharacterized LOC101246823 
 osa-u.5   4352336   uncharacterized LOC4352336 
 osa-u.5   112939710   uncharacterized LOC112939710 
 zma-u.5   103652748   probable stress-associated endoplasmic reticulum protein 
 zma-u.5   100381468   uncharacterized LOC100381468 
 zma-u.5   100286259   uncharacterized LOC100286259 
 ppo-u.5   7496568   uncharacterized LOC7496568 
 ppo-u.5   7495628   uncharacterized LOC7495628 
 mtr-u.5   25501758   stress-associated endoplasmic reticulum protein 2 

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Top 50 coexpressed genes to CHLRE_03g160300v5 (cre-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to CHLRE_03g160300v5 (cre-r.1 coexpression data)

CoexMap"5722992"


creCHLRE_03g160300v5 | Entrez gene ID : 5722992      
Species cre ath gma sly osa zma ppo mtr sbi nta bra vvi cit hvu bdi sot tae bna ghi
Paralog 1 2 3 1 2 3 2 1 0 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0030968 [list] [network] endoplasmic reticulum unfolded protein response  (14 genes)  IEA  
GO CC
GO:0005783 [list] [network] endoplasmic reticulum  (454 genes)  IEA  
GO MF
Protein XP_042925817.1 [sequence] [blastp]
Subcellular
localization
wolf
mito 4,  chlo 2,  cyto 2,  vacu 1,  pero 1,  golg 1  (predict for XP_042925817.1)
Subcellular
localization
TargetP
other 9  (predict for XP_042925817.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

cre-r.1
for
CHLRE_03g160300v5

.
ath-u.5
for
AT1G27330

.
ath-u.5
for
AT1G27350

.
gma-u.5
for
100820262

.
gma-u.5
for
100801005

.
gma-u.5
for
100781458

.
sly-u.5
for
101246823

.
osa-u.5
for
4352336

.
osa-u.5
for
112939710

.
zma-u.5
for
103652748

.
zma-u.5
for
100381468

.
zma-u.5
for
100286259

.
ppo-u.5
for
7496568

.
ppo-u.5
for
7495628

.
mtr-u.5
for
25501758

.


Ortholog ID: 2250
Species ath ath gma gma sly osa zma zma bra bra ppo mtr tae tae hvu hvu ghi ghi bna bna cre sbi sbi sot cit cit bdi bdi
Symbol AT1G27330 AT1G27350 LOC100820262 LOC100776262 LOC101246823 LOC4352336 LOC100381468 LOC100286259 LOC103835409 LOC103839046 LOC7496568 LOC25501758 LOC123168270 LOC123119888 LOC123425555 LOC123448339 LOC107916849 LOC107886431 LOC106358024 LOC106401801 CHLRE_03g160300v5 LOC8079152 LOC8067206 LOC102587936 LOC102618371 LOC102613771 LOC104584470 LOC100842783
Function* Ribosome associated membrane protein RAMP4 Ribosome associated membrane protein RAMP4 probable stress-associated endoplasmic reticulum protein ribosome associated membrane protein RAMP4 uncharacterized LOC101246823 uncharacterized LOC4352336 uncharacterized LOC100381468 uncharacterized LOC100286259 stress-associated endoplasmic reticulum protein 2 stress-associated endoplasmic reticulum protein 2 uncharacterized LOC7496568 stress-associated endoplasmic reticulum protein 2 stress-associated endoplasmic reticulum protein 2 probable stress-associated endoplasmic reticulum protein probable stress-associated endoplasmic reticulum protein stress-associated endoplasmic reticulum protein 2-like probable stress-associated endoplasmic reticulum protein stress-associated endoplasmic reticulum protein 2 stress-associated endoplasmic reticulum protein 2-like stress-associated endoplasmic reticulum protein 2-like uncharacterized protein stress-associated endoplasmic reticulum protein 2 probable stress-associated endoplasmic reticulum protein stress-associated endoplasmic reticulum protein 2 uncharacterized LOC102618371 uncharacterized LOC102613771 stress-associated endoplasmic reticulum protein 2 uncharacterized LOC100842783
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath04141 Protein processing in endoplasmic reticulum 9
ath04145 Phagosome 6
ath03060 Protein export 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath04141 Protein processing in endoplasmic reticulum 9
ath04145 Phagosome 6
ath03060 Protein export 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma04141 Protein processing in endoplasmic reticulum 5
gma03060 Protein export 4
gma04145 Phagosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly04141 Protein processing in endoplasmic reticulum 12
sly03060 Protein export 4
sly04145 Phagosome 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa04141 Protein processing in endoplasmic reticulum 2
osa03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03040 Spliceosome 4
zma04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma04141 Protein processing in endoplasmic reticulum 7
zma03060 Protein export 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra04141 Protein processing in endoplasmic reticulum 13
bra03060 Protein export 5
bra04145 Phagosome 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra04141 Protein processing in endoplasmic reticulum 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo04141 Protein processing in endoplasmic reticulum 12
ppo03060 Protein export 6
ppo04145 Phagosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr04141 Protein processing in endoplasmic reticulum 9
mtr03060 Protein export 5
mtr04145 Phagosome 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae04141 Protein processing in endoplasmic reticulum 4
tae03420 Nucleotide excision repair 3
tae04144 Endocytosis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae04120 Ubiquitin mediated proteolysis 6
tae03013 Nucleocytoplasmic transport 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03082 ATP-dependent chromatin remodeling 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi04120 Ubiquitin mediated proteolysis 11
ghi03083 Polycomb repressive complex 6
ghi04141 Protein processing in endoplasmic reticulum 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03010 Ribosome 6
ghi04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna04141 Protein processing in endoplasmic reticulum 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna04141 Protein processing in endoplasmic reticulum 3
bna00010 Glycolysis / Gluconeogenesis 2
bna00051 Fructose and mannose metabolism 2
bna00052 Galactose metabolism 2
bna00500 Starch and sucrose metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cre04141 Protein processing in endoplasmic reticulum 5
cre03060 Protein export 4
cre04145 Phagosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi00520 Amino sugar and nucleotide sugar metabolism 6
sbi01250 Biosynthesis of nucleotide sugars 6
sbi00040 Pentose and glucuronate interconversions 2
sbi00053 Ascorbate and aldarate metabolism 2
sbi00541 Biosynthesis of various nucleotide sugars 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi04141 Protein processing in endoplasmic reticulum 5
sbi03060 Protein export 5
sbi04145 Phagosome 3
sbi01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot04141 Protein processing in endoplasmic reticulum 14
sot04145 Phagosome 8
sot03060 Protein export 7
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit00350 Tyrosine metabolism 2
cit00360 Phenylalanine metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit04141 Protein processing in endoplasmic reticulum 8
cit04120 Ubiquitin mediated proteolysis 4
cit03083 Polycomb repressive complex 3
cit03060 Protein export 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03060 Protein export 4
bdi04130 SNARE interactions in vesicular transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03010 Ribosome 3
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 839622 839624 100820262 100776262 101246823 4352336 100381468 100286259 103835409 103839046 7496568 25501758 123168270 123119888 123425555 123448339 107916849 107886431 106358024 106401801 5722992 8079152 8067206 102587936 102618371 102613771 104584470 100842783
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