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Orthologous genes in OrthoFinder**

Species Gene Description
 cre-r.1   CHLRE_03g159950v5   uncharacterized protein 
 ath-u.5   EDA7   embryo sac development arrest 7 
 gma-u.5   100813898   nucleolar protein 10 
 gma-u.5   100817392   nucleolar protein 10 
 sly-u.5   101246880   uncharacterized LOC101246880 
 osa-u.5   4339985   uncharacterized LOC4339985 
 zma-u.5   103637924   nucleolar protein 10 
 zma-u.5   100381920   uncharacterized LOC100381920 
 vvi-u.5   100257259   uncharacterized LOC100257259 
 ppo-u.5   7464103   uncharacterized LOC7464103 
 mtr-u.5   11405313   nucleolar protein 10 

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Top 50 coexpressed genes to CHLRE_03g159950v5 (cre-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to CHLRE_03g159950v5 (cre-r.1 coexpression data)

CoexMap"5722998"


creCHLRE_03g159950v5 | Entrez gene ID : 5722998    
Species cre ath gma sly osa zma vvi ppo mtr sbi nta bra hvu cit bdi sot tae bna ghi
Paralog 1 1 2 1 1 2 1 1 1 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0000462 [list] [network] maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)  (29 genes)  IEA  
GO CC
GO:0030686 [list] [network] 90S preribosome  (30 genes)  IEA  
GO:0032040 [list] [network] small-subunit processome  (35 genes)  IEA  
GO:0005730 [list] [network] nucleolus  (152 genes)  IEA  
GO:0005634 [list] [network] nucleus  (1576 genes)  IEA  
GO MF
GO:0005515 [list] [network] protein binding  (1927 genes)  IEA  
Protein XP_042925811.1 [sequence] [blastp]
Subcellular
localization
wolf
cyto 4,  nucl 2,  cyto_pero 2,  cyto_plas 2  (predict for XP_042925811.1)
Subcellular
localization
TargetP
other 8  (predict for XP_042925811.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

cre-r.1
for
CHLRE_03g159950v5

.
ath-u.5
for
EDA7

.
gma-u.5
for
100813898

.
gma-u.5
for
100817392

.
sly-u.5
for
101246880

.
osa-u.5
for
4339985

.
zma-u.5
for
103637924

.
zma-u.5
for
100381920

.
vvi-u.5
for
100257259

.
ppo-u.5
for
7464103

.
mtr-u.5
for
11405313

.


Ortholog ID: 8058
Species ath gma gma sly osa zma zma bra vvi ppo mtr tae tae hvu ghi ghi bna bna cre sbi sot cit bdi nta nta
Symbol EDA7 LOC100813898 LOC100817392 LOC101246880 LOC4339985 LOC103637924 LOC100381920 LOC103841603 LOC100257259 LOC7464103 LOC11405313 LOC123088246 LOC123164811 LOC123409796 LOC107925939 LOC107942592 LOC106368039 LOC106449479 CHLRE_03g159950v5 LOC8069043 LOC102593933 LOC102627017 LOC100823293 LOC107828340 LOC107791871
Function* embryo sac development arrest 7 nucleolar protein 10 nucleolar protein 10 uncharacterized LOC101246880 uncharacterized LOC4339985 nucleolar protein 10 uncharacterized LOC100381920 nucleolar protein 10 uncharacterized LOC100257259 uncharacterized LOC7464103 nucleolar protein 10 nucleolar protein 10 nucleolar protein 10 nucleolar protein 10 nucleolar protein 10 nucleolar protein 10 nucleolar protein 10 nucleolar protein 10-like uncharacterized protein nucleolar protein 10 nucleolar protein 10 uncharacterized LOC102627017 nucleolar protein 10 uncharacterized LOC107828340 uncharacterized LOC107791871
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03008 Ribosome biogenesis in eukaryotes 7
ath03020 RNA polymerase 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03008 Ribosome biogenesis in eukaryotes 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03008 Ribosome biogenesis in eukaryotes 8
sly03020 RNA polymerase 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03008 Ribosome biogenesis in eukaryotes 2
osa03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03008 Ribosome biogenesis in eukaryotes 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03008 Ribosome biogenesis in eukaryotes 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03008 Ribosome biogenesis in eukaryotes 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03008 Ribosome biogenesis in eukaryotes 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03008 Ribosome biogenesis in eukaryotes 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03008 Ribosome biogenesis in eukaryotes 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03008 Ribosome biogenesis in eukaryotes 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03008 Ribosome biogenesis in eukaryotes 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03010 Ribosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03008 Ribosome biogenesis in eukaryotes 3
ghi03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03008 Ribosome biogenesis in eukaryotes 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cre03008 Ribosome biogenesis in eukaryotes 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03008 Ribosome biogenesis in eukaryotes 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03008 Ribosome biogenesis in eukaryotes 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03040 Spliceosome 3
cit03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03008 Ribosome biogenesis in eukaryotes 3
bdi03020 RNA polymerase 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03020 RNA polymerase 3
nta03008 Ribosome biogenesis in eukaryotes 2
nta03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03008 Ribosome biogenesis in eukaryotes 4
nta03020 RNA polymerase 3
nta03013 Nucleocytoplasmic transport 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 824866 100813898 100817392 101246880 4339985 103637924 100381920 103841603 100257259 7464103 11405313 123088246 123164811 123409796 107925939 107942592 106368039 106449479 5722998 8069043 102593933 102627017 100823293 107828340 107791871
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