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Orthologous genes in OrthoFinder**

Species Gene Description
 cre-r.1   CHLRE_03g156100v5   uncharacterized protein 
 ath-u.5   DOT2   SART-1 family 
 gma-u.5   100793984   SART-1 family protein DOT2 
 gma-u.5   100787646   SART-1 family protein DOT2 
 gma-u.5   100785682   SART-1 family protein DOT2 
 sly-u.5   101249496   SART-1 family protein DOT2 
 sly-u.5   101246008   SART-1 family protein DOT2 
 osa-u.5   4329455   SART-1 family protein DOT2 
 zma-u.5   100502327   SART-1 family protein DOT2 
 vvi-u.5   100266959   SART-1 family protein DOT2 
 ppo-u.5   7477810   SART-1 family protein DOT2 
 mtr-u.5   11421963   SART-1 family protein DOT2 
 mtr-u.5   25482516   SART-1 family protein DOT2 

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Top 50 coexpressed genes to CHLRE_03g156100v5 (cre-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to CHLRE_03g156100v5 (cre-r.1 coexpression data)

CoexMap"5723054"


creCHLRE_03g156100v5 | Entrez gene ID : 5723054    
Species cre ath gma sly osa zma vvi ppo mtr sbi nta bra hvu cit bdi sot tae bna ghi
Paralog 1 1 3 2 1 1 1 1 2 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG cre03040 [list] [network] Spliceosome (105 genes)
GO BP
GO:0000481 [list] [network] maturation of 5S rRNA  (1 genes)  IEA  
GO:0045292 [list] [network] mRNA cis splicing, via spliceosome  (14 genes)  IEA  
GO CC
GO:0046540 [list] [network] U4/U6 x U5 tri-snRNP complex  (18 genes)  IEA  
GO MF
Protein XP_042925726.1 [sequence] [blastp]
Subcellular
localization
wolf
nucl 6,  cyto 4  (predict for XP_042925726.1)
Subcellular
localization
TargetP
other 7,  chlo 5  (predict for XP_042925726.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

cre-r.1
for
CHLRE_03g156100v5

.
ath-u.5
for
DOT2

.
gma-u.5
for
100793984

.
gma-u.5
for
100787646

.
gma-u.5
for
100785682

.
sly-u.5
for
101249496

.
sly-u.5
for
101246008

.
osa-u.5
for
4329455

.
zma-u.5
for
100502327

.
vvi-u.5
for
100266959

.
ppo-u.5
for
7477810

.
mtr-u.5
for
11421963

.
mtr-u.5
for
25482516

.


Ortholog ID: 6084
Species ath gma gma sly sly osa zma bra vvi ppo mtr mtr tae tae hvu ghi ghi bna bna cre sbi sot sot cit bdi bdi nta nta
Symbol DOT2 LOC100785682 LOC100793984 LOC101246008 LOC101249496 LOC4329455 LOC100502327 LOC103846295 LOC100266959 LOC7477810 LOC11421963 LOC25482516 LOC123047462 LOC123191097 LOC123428457 LOC121216779 LOC107904018 LOC106371980 LOC106387692 CHLRE_03g156100v5 LOC8063527 LOC102599556 LOC102597062 LOC102613242 LOC100841075 LOC100825209 LOC107806343 LOC107768479
Function* SART-1 family SART-1 family protein DOT2 SART-1 family protein DOT2 SART-1 family protein DOT2 SART-1 family protein DOT2 SART-1 family protein DOT2 SART-1 family protein DOT2 SART-1 family protein DOT2 SART-1 family protein DOT2 SART-1 family protein DOT2 SART-1 family protein DOT2 SART-1 family protein DOT2 SART-1 family protein DOT2 SART-1 family protein DOT2-like SART-1 family protein DOT2 SART-1 family protein DOT2 SART-1 family protein DOT2 SART-1 family protein DOT2-like SART-1 family protein DOT2 uncharacterized protein SART-1 family protein DOT2 SART-1 family protein DOT2 SART-1 family protein DOT2-like SART-1 family protein DOT2 SART-1 family protein DOT2 SART-1 family protein DOT2 SART-1 family protein DOT2-like SART-1 family protein DOT2
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03040 Spliceosome 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03040 Spliceosome 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03040 Spliceosome 5
gma03022 Basal transcription factors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03015 mRNA surveillance pathway 2
sly03250 Viral life cycle - HIV-1 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03040 Spliceosome 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03040 Spliceosome 4
zma03250 Viral life cycle - HIV-1 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03040 Spliceosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03040 Spliceosome 3
vvi03022 Basal transcription factors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03040 Spliceosome 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03040 Spliceosome 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03040 Spliceosome 9
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03040 Spliceosome 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03040 Spliceosome 6
hvu03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03040 Spliceosome 2
ghi03420 Nucleotide excision repair 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03040 Spliceosome 2
ghi03420 Nucleotide excision repair 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03040 Spliceosome 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03040 Spliceosome 7
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cre03040 Spliceosome 5
cre03020 RNA polymerase 2
cre03420 Nucleotide excision repair 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03040 Spliceosome 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03040 Spliceosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot04626 Plant-pathogen interaction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03040 Spliceosome 5
bdi03013 Nucleocytoplasmic transport 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03040 Spliceosome 4
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 831541 100785682 100793984 101246008 101249496 4329455 100502327 103846295 100266959 7477810 11421963 25482516 123047462 123191097 123428457 121216779 107904018 106371980 106387692 5723054 8063527 102599556 102597062 102613242 100841075 100825209 107806343 107768479
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