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Orthologous genes in OrthoFinder**

Species Gene Description
 cre-r.1   CHLRE_05g240500v5   uncharacterized protein 
 ath-u.5   AT5G24680   Peptidase C78, ubiquitin fold modifier-specific peptidase 1/ 2 
 gma-u.5   100789113   zinc finger-containing ubiquitin peptidase 1 
 gma-u.5   100781936   zinc finger-containing ubiquitin peptidase 1 
 sly-u.5   101268481   uncharacterized LOC101268481 
 osa-u.5   4328021   uncharacterized LOC4328021 
 zma-u.5   100192023   uncharacterized LOC100192023 
 zma-u.5   103654987   zinc finger with UFM1-specific peptidase domain protein 
 bra-r.6   103874340   zinc finger-containing ubiquitin peptidase 1 
 vvi-u.5   100250322   uncharacterized LOC100250322 
 ppo-u.5   18103598   uncharacterized LOC18103598 
 mtr-u.5   11409854   zinc finger-containing ubiquitin peptidase 1 
 mtr-u.5   11418506   zinc finger-containing ubiquitin peptidase 1 
 tae-r.2   123135462   zinc finger-containing ubiquitin peptidase 1 
 tae-r.2   123140746   zinc finger-containing ubiquitin peptidase 1 
 hvu-r.1   123401418   zinc finger-containing ubiquitin peptidase 1 
 ghi-r.1   107912159   zinc finger-containing ubiquitin peptidase 1 
 bna-r.1   106348491   zinc finger-containing ubiquitin peptidase 1 
 bna-r.1   106348433   zinc finger-containing ubiquitin peptidase 1 
 sbi-r.1   8066483   zinc finger with UFM1-specific peptidase domain protein 
 sot-r.1   102598941   zinc finger with UFM1-specific peptidase domain protein 
 bdi-r.1   100824606   zinc finger with UFM1-specific peptidase domain protein 
 nta-r.1   107802739   uncharacterized LOC107802739 
 nta-r.1   107770455   uncharacterized LOC107770455 

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Top 50 coexpressed genes to CHLRE_05g240500v5 (cre-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to CHLRE_05g240500v5 (cre-r.1 coexpression data)

CoexMap"5723318"


creCHLRE_05g240500v5 | Entrez gene ID : 5723318    
Species cre ath gma sly osa zma bra vvi ppo mtr tae hvu ghi bna sbi sot bdi nta cit
Paralog 1 1 2 1 1 2 1 1 1 2 2 1 1 2 1 1 1 2 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO CC
GO MF
GO:0008270 [list] [network] zinc ion binding  (213 genes)  IEA  
Protein XP_042924931.1 [sequence] [blastp]
Subcellular
localization
wolf
nucl 9,  mito 1  (predict for XP_042924931.1)
Subcellular
localization
TargetP
chlo 3,  other 3  (predict for XP_042924931.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

cre-r.1
for
CHLRE_05g240500v5
ath-u.5
for
AT5G24680
gma-u.5
for
100789113
gma-u.5
for
100781936
sly-u.5
for
101268481
osa-u.5
for
4328021
zma-u.5
for
100192023
zma-u.5
for
103654987
bra-r.6
for
103874340
vvi-u.5
for
100250322
ppo-u.5
for
18103598
mtr-u.5
for
11409854
mtr-u.5
for
11418506
tae-r.2
for
123135462
tae-r.2
for
123140746
hvu-r.1
for
123401418
ghi-r.1
for
107912159
bna-r.1
for
106348491
bna-r.1
for
106348433
sbi-r.1
for
8066483
sot-r.1
for
102598941
bdi-r.1
for
100824606
nta-r.1
for
107802739
nta-r.1
for
107770455


Ortholog ID: 9691
Species cre ath gma gma sly osa zma zma bra vvi ppo mtr mtr tae tae hvu ghi bna bna sbi sot bdi nta nta
Symbol CHLRE_05g240500v5 AT5G24680 LOC100789113 LOC100781936 LOC101268481 LOC4328021 LOC100192023 LOC103654987 LOC103874340 LOC100250322 LOC18103598 LOC11409854 LOC11418506 LOC123135462 LOC123140746 LOC123401418 LOC107912159 LOC106348491 LOC106348433 LOC8066483 LOC102598941 LOC100824606 LOC107802739 LOC107770455
Function* uncharacterized protein Peptidase C78, ubiquitin fold modifier-specific peptidase 1/ 2 zinc finger-containing ubiquitin peptidase 1 zinc finger-containing ubiquitin peptidase 1 uncharacterized LOC101268481 uncharacterized LOC4328021 uncharacterized LOC100192023 zinc finger with UFM1-specific peptidase domain protein zinc finger-containing ubiquitin peptidase 1 uncharacterized LOC100250322 uncharacterized LOC18103598 zinc finger-containing ubiquitin peptidase 1 zinc finger-containing ubiquitin peptidase 1 zinc finger-containing ubiquitin peptidase 1 zinc finger-containing ubiquitin peptidase 1 zinc finger-containing ubiquitin peptidase 1 zinc finger-containing ubiquitin peptidase 1 zinc finger-containing ubiquitin peptidase 1 zinc finger-containing ubiquitin peptidase 1 zinc finger with UFM1-specific peptidase domain protein zinc finger with UFM1-specific peptidase domain protein zinc finger with UFM1-specific peptidase domain protein uncharacterized LOC107802739 uncharacterized LOC107770455
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cre03450 Non-homologous end-joining 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath04144 Endocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma04814 Motor proteins 7
gma00500 Starch and sucrose metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00400 Phenylalanine, tyrosine and tryptophan biosynthesis 2
ghi01230 Biosynthesis of amino acids 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03250 Viral life cycle - HIV-1 3
bna03272 Virion - Hepatitis viruses 3
bna04144 Endocytosis 3
bna00130 Ubiquinone and other terpenoid-quinone biosynthesis 2
bna01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03250 Viral life cycle - HIV-1 5
bna03272 Virion - Hepatitis viruses 5
bna04144 Endocytosis 5
bna00052 Galactose metabolism 2
bna00511 Other glycan degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03040 Spliceosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03040 Spliceosome 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 5723318 832540 100789113 100781936 101268481 4328021 100192023 103654987 103874340 100250322 18103598 11409854 11418506 123135462 123140746 123401418 107912159 106348491 106348433 8066483 102598941 100824606 107802739 107770455
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