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Orthologous genes in OrthoFinder**

Species Gene Description
 cre-r.1   CHLRE_16g659550v5   uncharacterized protein 
 cre-r.1   CHLRE_16g659450v5   uncharacterized protein 
 cre-r.1   CHLRE_16g659500v5   uncharacterized protein 
 cre-r.1   CHLRE_14g625225v5   uncharacterized protein 
 ath-u.5   AT3G09020   alpha 1,4-glycosyltransferase family protein 
 ath-u.5   AT5G01250   alpha 1,4-glycosyltransferase family protein 
 gma-u.5   100789203   lactosylceramide 4-alpha-galactosyltransferase 
 sly-u.5   101250644   uncharacterized LOC101250644 
 sly-u.5   101265092   uncharacterized protein At4g19900 
 osa-u.5   4336475   uncharacterized protein At4g19900 
 bra-r.6   103847504   lactosylceramide 4-alpha-galactosyltransferase 
 vvi-u.5   100247748   uncharacterized LOC100247748 
 vvi-u.5   100853373   uncharacterized protein At4g19900 
 ppo-u.5   7485449   uncharacterized LOC7485449 
 mtr-u.5   11426316   uncharacterized protein At4g19900 
 ghi-r.1   107937745   lactosylceramide 4-alpha-galactosyltransferase 
 ghi-r.1   107889767   lactosylceramide 4-alpha-galactosyltransferase 
 ghi-r.1   107890972   lactosylceramide 4-alpha-galactosyltransferase 
 bna-r.1   111215802   lactosylceramide 4-alpha-galactosyltransferase-like 
 sot-r.1   102603042   lactosylceramide 4-alpha-galactosyltransferase 
 sot-r.1   102584175   lactosylceramide 4-alpha-galactosyltransferase-like 
 nta-r.1   107769309   uncharacterized protein At4g19900-like 
 nta-r.1   107808382   uncharacterized protein At4g19900-like 
 nta-r.1   107759048   uncharacterized LOC107759048 

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Top 50 coexpressed genes to CHLRE_16g659550v5 (cre-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to CHLRE_16g659550v5 (cre-r.1 coexpression data)

CoexMap"5723482"


creCHLRE_16g659550v5 | Entrez gene ID : 5723482      
Species cre ath gma sly osa bra vvi ppo mtr ghi bna sot nta hvu bdi tae zma sbi cit
Paralog 4 2 1 2 1 1 2 1 1 3 1 2 3 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0006688 [list] [network] glycosphingolipid biosynthetic process  (7 genes)  IEA  
GO CC
GO MF
GO:0016758 [list] [network] hexosyltransferase activity  (73 genes)  IEA  
Protein XP_042915600.1 [sequence] [blastp]
XP_042915601.1 [sequence] [blastp]
XP_042915602.1 [sequence] [blastp]
Subcellular
localization
wolf
chlo 5,  nucl 1,  cyto 1,  mito 1,  plas 1,  vacu 1,  E.R. 1,  golg 1,  cyto_nucl 1,  nucl_plas 1,  golg_plas 1,  E.R._vacu 1,  E.R._plas 1,  mito_plas 1,  cyto_E.R. 1,  cyto_plas 1  (predict for XP_042915600.1)
chlo 5,  cyto 1,  nucl 1,  mito 1,  vacu 1,  E.R. 1,  golg 1,  E.R._vacu 1,  cyto_pero 1,  cyto_plas 1  (predict for XP_042915601.1)
chlo 6,  pero 1,  nucl 1,  cyto 1,  mito 1,  extr 1,  cyto_nucl 1  (predict for XP_042915602.1)
Subcellular
localization
TargetP
scret 8,  mito 3  (predict for XP_042915600.1)
scret 8,  mito 3  (predict for XP_042915601.1)
other 6  (predict for XP_042915602.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

cre-r.1
for
CHLRE_16g659550v5
cre-r.1
for
CHLRE_16g659450v5
cre-r.1
for
CHLRE_16g659500v5
cre-r.1
for
CHLRE_14g625225v5
ath-u.5
for
AT3G09020
ath-u.5
for
AT5G01250
gma-u.5
for
100789203
sly-u.5
for
101250644
sly-u.5
for
101265092
osa-u.5
for
4336475
bra-r.6
for
103847504
vvi-u.5
for
100247748
vvi-u.5
for
100853373
ppo-u.5
for
7485449
mtr-u.5
for
11426316
ghi-r.1
for
107937745
ghi-r.1
for
107889767
ghi-r.1
for
107890972
bna-r.1
for
111215802
sot-r.1
for
102603042
sot-r.1
for
102584175
nta-r.1
for
107769309
nta-r.1
for
107808382
nta-r.1
for
107759048


Ortholog ID: 1537
Species cre cre cre ath ath sly sly osa bra bra bra vvi vvi ppo mtr ghi ghi ghi bna sot sot cit nta nta nta
Symbol CHLRE_16g659450v5 CHLRE_16g659500v5 CHLRE_14g625225v5 AT3G09020 AT5G01250 LOC101250644 LOC101265092 LOC4336475 LOC103847504 LOC103848331 LOC103870568 LOC100247748 LOC100853373 LOC7485449 LOC11426316 LOC107890972 LOC107930131 LOC107930134 LOC106427911 LOC102603042 LOC102584175 LOC102613019 LOC107808382 LOC107759048 LOC107761292
Function* uncharacterized protein uncharacterized protein uncharacterized protein alpha 1,4-glycosyltransferase family protein alpha 1,4-glycosyltransferase family protein uncharacterized LOC101250644 uncharacterized protein At4g19900 uncharacterized protein At4g19900 lactosylceramide 4-alpha-galactosyltransferase lactosylceramide 4-alpha-galactosyltransferase lactosylceramide 4-alpha-galactosyltransferase uncharacterized LOC100247748 uncharacterized protein At4g19900 uncharacterized LOC7485449 uncharacterized protein At4g19900 lactosylceramide 4-alpha-galactosyltransferase lactosylceramide 4-alpha-galactosyltransferase lactosylceramide 4-alpha-galactosyltransferase uncharacterized protein At4g19900 lactosylceramide 4-alpha-galactosyltransferase lactosylceramide 4-alpha-galactosyltransferase-like hypothetical protein uncharacterized protein At4g19900-like uncharacterized LOC107759048 uncharacterized LOC107761292
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa00603 Glycosphingolipid biosynthesis - globo and isoglobo series 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra02010 ABC transporters 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra00601 Glycosphingolipid biosynthesis - lacto and neolacto series 2
bra00603 Glycosphingolipid biosynthesis - globo and isoglobo series 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra04626 Plant-pathogen interaction 3
bra00601 Glycosphingolipid biosynthesis - lacto and neolacto series 2
bra00603 Glycosphingolipid biosynthesis - globo and isoglobo series 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi04145 Phagosome 3
vvi04517 IgSF CAM signaling 3
vvi04814 Motor proteins 3
vvi00603 Glycosphingolipid biosynthesis - globo and isoglobo series 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00601 Glycosphingolipid biosynthesis - lacto and neolacto series 2
ghi00603 Glycosphingolipid biosynthesis - globo and isoglobo series 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00601 Glycosphingolipid biosynthesis - lacto and neolacto series 4
ghi00603 Glycosphingolipid biosynthesis - globo and isoglobo series 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00196 Photosynthesis - antenna proteins 4
ghi00601 Glycosphingolipid biosynthesis - lacto and neolacto series 4
ghi00603 Glycosphingolipid biosynthesis - globo and isoglobo series 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00564 Glycerophospholipid metabolism 4
bna00565 Ether lipid metabolism 4
bna04144 Endocytosis 4
bna00601 Glycosphingolipid biosynthesis - lacto and neolacto series 4
bna00603 Glycosphingolipid biosynthesis - globo and isoglobo series 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot04144 Endocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00500 Starch and sucrose metabolism 2
nta00601 Glycosphingolipid biosynthesis - lacto and neolacto series 2
nta00603 Glycosphingolipid biosynthesis - globo and isoglobo series 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00601 Glycosphingolipid biosynthesis - lacto and neolacto series 2
nta00603 Glycosphingolipid biosynthesis - globo and isoglobo series 2
nta04626 Plant-pathogen interaction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00601 Glycosphingolipid biosynthesis - lacto and neolacto series 2
nta00603 Glycosphingolipid biosynthesis - globo and isoglobo series 2
nta00730 Thiamine metabolism 2
nta01240 Biosynthesis of cofactors 2
nta00940 Phenylpropanoid biosynthesis 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 5723480 5723481 5718300 820054 831833 101250644 101265092 4336475 103847504 103848331 103870568 100247748 100853373 7485449 11426316 107890972 107930131 107930134 106427911 102603042 102584175 102613019 107808382 107759048 107761292
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