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Orthologous genes in OrthoFinder**

Species Gene Description
 cre-r.1   CHLRE_06g278205v5   uncharacterized protein 
 ath-u.5   AT2G16405   Transducin/WD40 repeat-like superfamily protein 
 gma-u.5   100795887   WD repeat-containing protein 13 
 gma-u.5   100792346   WD repeat-containing protein 13 
 sly-u.5   101247167   uncharacterized LOC101247167 
 osa-u.5   4327892   uncharacterized LOC4327892 
 zma-u.5   100192985   Transducin/WD40 repeat-like superfamily protein 
 vvi-u.5   100258922   uncharacterized LOC100258922 
 ppo-u.5   7470016   uncharacterized LOC7470016 
 mtr-u.5   25501070   WD repeat-containing protein 13 

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Top 50 coexpressed genes to CHLRE_06g278205v5 (cre-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to CHLRE_06g278205v5 (cre-r.1 coexpression data)

CoexMap"5723632"


creCHLRE_06g278205v5 | Entrez gene ID : 5723632      
Species cre ath gma sly osa zma vvi ppo mtr sbi nta bra hvu cit bdi sot tae bna ghi
Paralog 1 1 2 1 1 1 1 1 1 0 0 0 0 0 0 0 0 0 0
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO CC
GO:0005634 [list] [network] nucleus  (1576 genes)  IEA  
GO MF
GO:1990841 [list] [network] promoter-specific chromatin binding  (2 genes)  IEA  
GO:0005515 [list] [network] protein binding  (1927 genes)  IEA  
Protein XP_042923840.1 [sequence] [blastp]
Subcellular
localization
wolf
cyto 6,  nucl 2,  chlo 1,  nucl_plas 1  (predict for XP_042923840.1)
Subcellular
localization
TargetP
other 7,  chlo 5  (predict for XP_042923840.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

cre-r.1
for
CHLRE_06g278205v5

.
ath-u.5
for
AT2G16405

.
gma-u.5
for
100795887

.
gma-u.5
for
100792346

.
sly-u.5
for
101247167

.
osa-u.5
for
4327892

.
zma-u.5
for
100192985

.
vvi-u.5
for
100258922

.
ppo-u.5
for
7470016

.
mtr-u.5
for
25501070

.


Ortholog ID: 7150
Species ath gma gma sly osa zma bra vvi ppo mtr tae tae hvu ghi ghi bna cre sbi sot cit bdi nta nta
Symbol AT2G16405 LOC100792346 LOC100795887 LOC101247167 LOC4327892 LOC100192985 LOC117127166 LOC100258922 LOC7470016 LOC25501070 LOC123062229 LOC123076346 LOC123441939 LOC107949394 LOC107928930 LOC106411531 CHLRE_06g278205v5 LOC8054697 LOC102586888 LOC102621717 LOC100841429 LOC107828283 LOC107783647
Function* Transducin/WD40 repeat-like superfamily protein WD repeat-containing protein 13 WD repeat-containing protein 13 uncharacterized LOC101247167 uncharacterized LOC4327892 Transducin/WD40 repeat-like superfamily protein uncharacterized LOC117127166 uncharacterized LOC100258922 uncharacterized LOC7470016 WD repeat-containing protein 13 WD repeat-containing protein 13 uncharacterized LOC123076346 WD repeat-containing protein 13 WD repeat-containing protein 13 WD repeat-containing protein 13 WD repeat-containing protein 13-like uncharacterized protein WD repeat-containing protein 13 WD repeat-containing protein 13 uncharacterized LOC102621717 WD repeat-containing protein 13 uncharacterized LOC107828283 uncharacterized LOC107783647
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath04144 Endocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma04145 Phagosome 2
gma00010 Glycolysis / Gluconeogenesis 2
gma04142 Lysosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma00071 Fatty acid degradation 3
gma00592 alpha-Linolenic acid metabolism 3
gma01212 Fatty acid metabolism 3
gma04626 Plant-pathogen interaction 2
gma00280 Valine, leucine and isoleucine degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly04144 Endocytosis 4
sly00190 Oxidative phosphorylation 2
sly04142 Lysosome 2
sly04145 Phagosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa04142 Lysosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma04144 Endocytosis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr04144 Endocytosis 2
mtr03013 Nucleocytoplasmic transport 2
mtr04142 Lysosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae04142 Lysosome 2
tae04144 Endocytosis 2
tae05100 Bacterial invasion of epithelial cells 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu04814 Motor proteins 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00564 Glycerophospholipid metabolism 4
ghi00565 Ether lipid metabolism 4
ghi04144 Endocytosis 4
ghi03015 mRNA surveillance pathway 2
ghi03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna04142 Lysosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cre04144 Endocytosis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03015 mRNA surveillance pathway 3
sot04382 Cornified envelope formation 2
sot04144 Endocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit00510 N-Glycan biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi04144 Endocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03015 mRNA surveillance pathway 4
nta04382 Cornified envelope formation 4
nta04142 Lysosome 3
nta04136 Autophagy - other 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta04142 Lysosome 5
nta03015 mRNA surveillance pathway 4
nta04382 Cornified envelope formation 4
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 816138 100792346 100795887 101247167 4327892 100192985 117127166 100258922 7470016 25501070 123062229 123076346 123441939 107949394 107928930 106411531 5723632 8054697 102586888 102621717 100841429 107828283 107783647
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