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Orthologous genes in OrthoFinder**

Species Gene Description
 cre-r.1   CHLRE_16g674534v5   uncharacterized protein 
 ath-u.5   AT3G17670   tetratricopeptide repeat (TPR)-containing protein 
 gma-u.5   100813823   small glutamine-rich tetratricopeptide repeat-containing protein alpha 
 sly-u.5   101257642   uncharacterized LOC101257642 
 osa-u.5   4337377   uncharacterized LOC4337377 
 zma-u.5   100281311   small glutamine-rich tetratricopeptide repeat-containing protein 2 
 zma-u.5   103655549   small glutamine-rich tetratricopeptide repeat-containing protein 2 
 vvi-u.5   104880091   uncharacterized LOC104880091 
 vvi-u.5   100265105   uncharacterized LOC100265105 
 ppo-u.5   18105613   uncharacterized LOC18105613 
 mtr-u.5   11430709   small glutamine-rich tetratricopeptide repeat-containing protein alpha 

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Top 50 coexpressed genes to CHLRE_16g674534v5 (cre-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to CHLRE_16g674534v5 (cre-r.1 coexpression data)

CoexMap"5724764"


creCHLRE_16g674534v5 | Entrez gene ID : 5724764      
Species cre ath gma sly osa zma vvi ppo mtr hvu sot tae nta bra cit ghi bna bdi sbi
Paralog 1 1 1 1 1 2 2 1 1 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO CC
GO MF
GO:0005515 [list] [network] protein binding  (1927 genes)  IEA  
Protein XP_001699214.1 [sequence] [blastp]
Subcellular
localization
wolf
chlo 6,  mito 3  (predict for XP_001699214.1)
Subcellular
localization
TargetP
mito 4  (predict for XP_001699214.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

cre-r.1
for
CHLRE_16g674534v5

.
ath-u.5
for
AT3G17670

.
gma-u.5
for
100813823

.
sly-u.5
for
101257642

.
osa-u.5
for
4337377

.
zma-u.5
for
100281311

.
zma-u.5
for
103655549

.
vvi-u.5
for
104880091

.
vvi-u.5
for
100265105

.
ppo-u.5
for
18105613

.
mtr-u.5
for
11430709

.


Ortholog ID: 9484
Species ath gma sly osa zma zma bra vvi vvi ppo mtr hvu bna bna cre cre sbi sot cit bdi nta nta
Symbol AT3G17670 LOC100813823 LOC101257642 LOC4337377 LOC103655549 LOC100281311 LOC103869667 LOC100265105 LOC104880091 LOC18105613 LOC11430709 LOC123428379 LOC106452008 LOC125609003 CHLRE_06g310200v5 CHLRE_16g674534v5 LOC8085852 LOC102602076 LOC102629155 LOC100845358 LOC107779875 LOC107800305
Function* tetratricopeptide repeat (TPR)-containing protein small glutamine-rich tetratricopeptide repeat-containing protein alpha uncharacterized LOC101257642 uncharacterized LOC4337377 small glutamine-rich tetratricopeptide repeat-containing protein 2 small glutamine-rich tetratricopeptide repeat-containing protein 2 uncharacterized LOC103869667 uncharacterized LOC100265105 uncharacterized LOC104880091 uncharacterized LOC18105613 small glutamine-rich tetratricopeptide repeat-containing protein alpha small glutamine-rich tetratricopeptide repeat-containing protein 2 small glutamine-rich tetratricopeptide repeat-containing protein alpha uncharacterized LOC125609003 uncharacterized protein uncharacterized protein small glutamine-rich tetratricopeptide repeat-containing protein 2 uncharacterized LOC102602076 uncharacterized LOC102629155 uncharacterized LOC100845358 uncharacterized LOC107779875 uncharacterized LOC107800305
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma00860 Porphyrin metabolism 2
gma01240 Biosynthesis of cofactors 2
gma00970 Aminoacyl-tRNA biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03010 Ribosome 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03010 Ribosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03010 Ribosome 3
bra00860 Porphyrin metabolism 2
bra01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03010 Ribosome 9
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo01200 Carbon metabolism 3
ppo00030 Pentose phosphate pathway 2
ppo00710 Carbon fixation by Calvin cycle 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cre00860 Porphyrin metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03050 Proteasome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00561 Glycerolipid metabolism 8
nta00566 Sulfoquinovose metabolism 6
nta00564 Glycerophospholipid metabolism 2
nta00565 Ether lipid metabolism 2
nta04144 Endocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00561 Glycerolipid metabolism 7
nta00566 Sulfoquinovose metabolism 5
nta00564 Glycerophospholipid metabolism 2
nta00565 Ether lipid metabolism 2
nta04144 Endocytosis 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 821034 100813823 101257642 4337377 103655549 100281311 103869667 100265105 104880091 18105613 11430709 123428379 106452008 125609003 5716804 5724764 8085852 102602076 102629155 100845358 107779875 107800305
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