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Orthologous genes in OrthoFinder**

Species Gene Description
 cre-r.1   CHLRE_03g202897v5   uncharacterized protein 
 ath-u.5   UBC32   ubiquitin-conjugating enzyme 32 
 gma-u.5   100804291   ubiquitin-conjugating enzyme E2 32-like 
 gma-u.5   100804054   ubiquitin-conjugating enzyme E2 32-like 
 gma-u.5   100798396   ubiquitin-conjugating enzyme E2 32 
 sly-u.5   101266615   ubiquitin-conjugating enzyme E2 32 
 osa-u.5   4332614   ubiquitin-conjugating enzyme E2 32 
 zma-u.5   103634565   ubiquitin-conjugating enzyme E2 32-like 
 zma-u.5   100284401   uncharacterized LOC100284401 
 vvi-u.5   100260130   ubiquitin-conjugating enzyme E2 32 
 ppo-u.5   7471109   ubiquitin-conjugating enzyme E2 32 
 ppo-u.5   7485817   ubiquitin-conjugating enzyme E2 32 
 mtr-u.5   11414701   ubiquitin-conjugating enzyme E2 32 

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Top 50 coexpressed genes to CHLRE_03g202897v5 (cre-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to CHLRE_03g202897v5 (cre-r.1 coexpression data)

CoexMap"5724935"


creCHLRE_03g202897v5 | Entrez gene ID : 5724935    
Species cre ath gma sly osa zma vvi ppo mtr sbi nta bra hvu cit bdi sot tae bna ghi
Paralog 1 1 3 1 1 2 1 2 1 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG cre04120 [list] [network] Ubiquitin mediated proteolysis (48 genes)
cre04141 [list] [network] Protein processing in endoplasmic reticulum (76 genes)
GO BP
GO CC
GO MF
Protein XP_042926644.1 [sequence] [blastp]
Subcellular
localization
wolf
nucl 4,  cyto_nucl 3,  mito 2,  cyto 1,  chlo_mito 1,  cyto_mito 1  (predict for XP_042926644.1)
Subcellular
localization
TargetP
other 7  (predict for XP_042926644.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

cre-r.1
for
CHLRE_03g202897v5

.
ath-u.5
for
UBC32

.
gma-u.5
for
100804291

.
gma-u.5
for
100804054

.
gma-u.5
for
100798396

.
sly-u.5
for
101266615

.
osa-u.5
for
4332614

.
zma-u.5
for
103634565

.
zma-u.5
for
100284401

.
vvi-u.5
for
100260130

.
ppo-u.5
for
7471109

.
ppo-u.5
for
7485817

.
mtr-u.5
for
11414701

.


Ortholog ID: 6267
Species ath gma gma sly osa zma zma bra bra vvi ppo ppo mtr tae tae hvu ghi ghi bna bna cre sbi sot cit bdi nta nta
Symbol UBC32 LOC100811370 LOC100798396 LOC101266615 LOC4332614 LOC103634565 LOC100284401 LOC103839514 LOC103869994 LOC100260130 LOC7471109 LOC7485817 LOC11414701 LOC123097674 LOC123085672 LOC123448820 LOC107926538 LOC107896624 LOC106396723 LOC125577366 CHLRE_03g202897v5 LOC110431699 LOC102583631 LOC102621055 LOC100831984 LOC107766688 LOC107775987
Function* ubiquitin-conjugating enzyme 32 ubiquitin-conjugating enzyme E2 32 ubiquitin-conjugating enzyme E2 32 ubiquitin-conjugating enzyme E2 32 ubiquitin-conjugating enzyme E2 32 ubiquitin-conjugating enzyme E2 32-like uncharacterized LOC100284401 ubiquitin-conjugating enzyme E2 32 ubiquitin-conjugating enzyme E2 32 ubiquitin-conjugating enzyme E2 32 ubiquitin-conjugating enzyme E2 32 ubiquitin-conjugating enzyme E2 32 ubiquitin-conjugating enzyme E2 32 ubiquitin-conjugating enzyme E2 32 ubiquitin-conjugating enzyme E2 32 ubiquitin-conjugating enzyme E2 32 ubiquitin-conjugating enzyme E2 32 ubiquitin-conjugating enzyme E2 32 ubiquitin-conjugating enzyme E2 32 ubiquitin-conjugating enzyme E2 32-like uncharacterized protein ubiquitin-conjugating enzyme E2 32 ubiquitin-conjugating enzyme E2 32 ubiquitin-conjugating enzyme E2 32 ubiquitin-conjugating enzyme E2 32 ubiquitin-conjugating enzyme E2 32-like ubiquitin-conjugating enzyme E2 32
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath04141 Protein processing in endoplasmic reticulum 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma04141 Protein processing in endoplasmic reticulum 4
gma00071 Fatty acid degradation 3
gma00592 alpha-Linolenic acid metabolism 3
gma01040 Biosynthesis of unsaturated fatty acids 3
gma01212 Fatty acid metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma04141 Protein processing in endoplasmic reticulum 4
gma04626 Plant-pathogen interaction 2
gma00071 Fatty acid degradation 2
gma00592 alpha-Linolenic acid metabolism 2
gma01040 Biosynthesis of unsaturated fatty acids 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly04136 Autophagy - other 2
sly03272 Virion - Hepatitis viruses 2
sly04144 Endocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa04141 Protein processing in endoplasmic reticulum 3
osa04144 Endocytosis 2
osa04517 IgSF CAM signaling 2
osa05100 Bacterial invasion of epithelial cells 2
osa04130 SNARE interactions in vesicular transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma04141 Protein processing in endoplasmic reticulum 4
zma04120 Ubiquitin mediated proteolysis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma04120 Ubiquitin mediated proteolysis 4
zma04141 Protein processing in endoplasmic reticulum 2
zma04144 Endocytosis 2
zma04130 SNARE interactions in vesicular transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03015 mRNA surveillance pathway 2
bra04120 Ubiquitin mediated proteolysis 2
bra04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo04144 Endocytosis 6
ppo04120 Ubiquitin mediated proteolysis 3
ppo04145 Phagosome 3
ppo04148 Efferocytosis 3
ppo03250 Viral life cycle - HIV-1 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo04120 Ubiquitin mediated proteolysis 2
ppo04141 Protein processing in endoplasmic reticulum 2
ppo04712 Circadian rhythm - plant 2
ppo04136 Autophagy - other 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae04141 Protein processing in endoplasmic reticulum 6
tae04146 Peroxisome 3
tae04120 Ubiquitin mediated proteolysis 3
tae04130 SNARE interactions in vesicular transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae04141 Protein processing in endoplasmic reticulum 6
tae04146 Peroxisome 3
tae04130 SNARE interactions in vesicular transport 3
tae04120 Ubiquitin mediated proteolysis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu04141 Protein processing in endoplasmic reticulum 11
hvu04145 Phagosome 4
hvu03060 Protein export 2
hvu04148 Efferocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi04120 Ubiquitin mediated proteolysis 2
ghi04141 Protein processing in endoplasmic reticulum 2
ghi00564 Glycerophospholipid metabolism 2
ghi00565 Ether lipid metabolism 2
ghi04144 Endocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi04120 Ubiquitin mediated proteolysis 2
ghi04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna04141 Protein processing in endoplasmic reticulum 4
bna04120 Ubiquitin mediated proteolysis 2
bna04136 Autophagy - other 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna04141 Protein processing in endoplasmic reticulum 4
bna04120 Ubiquitin mediated proteolysis 2
bna04136 Autophagy - other 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cre04141 Protein processing in endoplasmic reticulum 6
cre03060 Protein export 2
cre04145 Phagosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot04141 Protein processing in endoplasmic reticulum 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit04144 Endocytosis 2
cit04141 Protein processing in endoplasmic reticulum 2
cit03050 Proteasome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi04144 Endocytosis 5
bdi04145 Phagosome 4
bdi04148 Efferocytosis 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta04141 Protein processing in endoplasmic reticulum 9
nta04120 Ubiquitin mediated proteolysis 4
nta04016 MAPK signaling pathway - plant 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta04141 Protein processing in endoplasmic reticulum 10
nta04120 Ubiquitin mediated proteolysis 4
nta04145 Phagosome 4
nta04016 MAPK signaling pathway - plant 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 820956 100811370 100798396 101266615 4332614 103634565 100284401 103839514 103869994 100260130 7471109 7485817 11414701 123097674 123085672 123448820 107926538 107896624 106396723 125577366 5724935 110431699 102583631 102621055 100831984 107766688 107775987
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