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Orthologous genes in OrthoFinder**

Species Gene Description
 cre-r.1   CHLRE_01g063267v5   uncharacterized protein 
 ath-u.5   AT1G31660   bystin-like protein 
 gma-u.5   100812921   bystin 
 gma-u.5   100812699   bystin 
 sly-u.5   101267909   bystin-like protein 
 osa-u.5   4346824   bystin 
 zma-u.5   100274326   uncharacterized LOC100274326 
 vvi-u.5   100251935   bystin 
 vvi-u.5   100256263   bystin 
 ppo-u.5   18095518   bystin 
 ppo-u.5   7491026   bystin 
 mtr-u.5   11410964   bystin 

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Top 50 coexpressed genes to CHLRE_01g063267v5 (cre-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to CHLRE_01g063267v5 (cre-r.1 coexpression data)

CoexMap"5725792"


creCHLRE_01g063267v5 | Entrez gene ID : 5725792    
Species cre ath gma sly osa zma vvi ppo mtr sbi nta bra hvu cit bdi sot tae bna ghi
Paralog 1 1 2 1 1 1 2 2 1 0 0 0 0 0 0 0 0 0 0
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0006364 [list] [network] rRNA processing  (218 genes)  IEA  
GO CC
GO:0030688 [list] [network] preribosome, small subunit precursor  (12 genes)  IEA  
GO:0005730 [list] [network] nucleolus  (152 genes)  IEA  
GO:0005737 [list] [network] cytoplasm  (2907 genes)  IEA  
GO MF
GO:0030515 [list] [network] snoRNA binding  (19 genes)  IEA  
Protein XP_042928985.1 [sequence] [blastp]
Subcellular
localization
wolf
chlo 5,  nucl 2,  cyto 2,  cyto_nucl 2  (predict for XP_042928985.1)
Subcellular
localization
TargetP
other 5,  mito 4  (predict for XP_042928985.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

cre-r.1
for
CHLRE_01g063267v5

.
ath-u.5
for
AT1G31660

.
gma-u.5
for
100812921

.
gma-u.5
for
100812699

.
sly-u.5
for
101267909

.
osa-u.5
for
4346824

.
zma-u.5
for
100274326

.
vvi-u.5
for
100251935

.
vvi-u.5
for
100256263

.
ppo-u.5
for
18095518

.
ppo-u.5
for
7491026

.
mtr-u.5
for
11410964

.


Ortholog ID: 7828
Species ath gma gma sly osa zma bra bra vvi vvi ppo ppo mtr tae tae hvu ghi ghi bna bna cre sbi sot cit bdi bdi nta nta
Symbol AT1G31660 LOC100812921 LOC100812699 LOC101267909 LOC4346824 LOC100274326 LOC103828778 LOC103840231 LOC100256263 LOC100251935 LOC18095518 LOC7491026 LOC11410964 LOC123047436 LOC123191071 LOC123428318 LOC107953158 LOC107954112 LOC106401830 LOC106355107 CHLRE_01g063267v5 LOC8076476 LOC102602942 LOC102606860 LOC100827043 LOC100828159 LOC107807361 LOC107799512
Function* bystin-like protein bystin bystin bystin-like protein bystin uncharacterized LOC100274326 bystin bystin bystin bystin bystin bystin bystin bystin bystin bystin bystin bystin bystin-like bystin uncharacterized protein bystin bystin bystin bystin bystin bystin bystin
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03008 Ribosome biogenesis in eukaryotes 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03008 Ribosome biogenesis in eukaryotes 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03008 Ribosome biogenesis in eukaryotes 7
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03008 Ribosome biogenesis in eukaryotes 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03008 Ribosome biogenesis in eukaryotes 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03008 Ribosome biogenesis in eukaryotes 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03008 Ribosome biogenesis in eukaryotes 2
ppo03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03008 Ribosome biogenesis in eukaryotes 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03008 Ribosome biogenesis in eukaryotes 6
tae03022 Basal transcription factors 2
tae03420 Nucleotide excision repair 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03022 Basal transcription factors 2
tae03420 Nucleotide excision repair 2
tae03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03010 Ribosome 11
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03008 Ribosome biogenesis in eukaryotes 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03008 Ribosome biogenesis in eukaryotes 4
ghi03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03008 Ribosome biogenesis in eukaryotes 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cre03008 Ribosome biogenesis in eukaryotes 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03008 Ribosome biogenesis in eukaryotes 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03008 Ribosome biogenesis in eukaryotes 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03040 Spliceosome 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03008 Ribosome biogenesis in eukaryotes 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03008 Ribosome biogenesis in eukaryotes 5
bdi03018 RNA degradation 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 840053 100812921 100812699 101267909 4346824 100274326 103828778 103840231 100256263 100251935 18095518 7491026 11410964 123047436 123191071 123428318 107953158 107954112 106401830 106355107 5725792 8076476 102602942 102606860 100827043 100828159 107807361 107799512
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