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Orthologous genes in OrthoFinder**

Species Gene Description
 cre-r.1   CHLRE_01g071662v5   uncharacterized protein 
 ath-u.5   ACS   acetyl-CoA synthetase 
 gma-u.5   100808939   acetyl-coenzyme A synthetase, chloroplastic/glyoxysomal 
 gma-u.5   100789257   acetyl-coenzyme A synthetase, chloroplastic/glyoxysomal 
 sly-u.5   101264442   acetyl-coenzyme A synthetase, chloroplastic/glyoxysomal-like 
 sly-u.5   101256234   acetyl-coenzyme A synthetase, chloroplastic/glyoxysomal-like 
 osa-u.5   4329518   acetyl-coenzyme A synthetase, chloroplastic/glyoxysomal 
 osa-u.5   4335745   acetyl-coenzyme A synthetase, chloroplastic/glyoxysomal 
 zma-u.5   103646525   acetyl-coenzyme A synthetase, chloroplastic/glyoxysomal 
 zma-u.5   100279194   uncharacterized LOC100279194 
 vvi-u.5   100263518   acetyl-coenzyme A synthetase, chloroplastic/glyoxysomal 
 ppo-u.5   7458000   acetyl-coenzyme A synthetase, chloroplastic/glyoxysomal 
 mtr-u.5   11437257   acetyl-coenzyme A synthetase, chloroplastic/glyoxysomal 

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Top 50 coexpressed genes to CHLRE_01g071662v5 (cre-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to CHLRE_01g071662v5 (cre-r.1 coexpression data)

CoexMap"5725801"


creCHLRE_01g071662v5 | Entrez gene ID : 5725801      
Species cre ath gma sly osa zma vvi ppo mtr sbi nta bra hvu cit bdi sot tae bna ghi
Paralog 1 1 2 2 2 2 1 1 1 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG cre00010 [list] [network] Glycolysis / Gluconeogenesis (48 genes)
cre00620 [list] [network] Pyruvate metabolism (51 genes)
cre00630 [list] [network] Glyoxylate and dicarboxylate metabolism (43 genes)
cre00640 [list] [network] Propanoate metabolism (20 genes)
cre01200 [list] [network] Carbon metabolism (143 genes)
GO BP
GO:0019427 [list] [network] acetyl-CoA biosynthetic process from acetate  (3 genes)  IEA  
GO CC
GO MF
GO:0003987 [list] [network] acetate-CoA ligase activity  (3 genes)  IEA  
GO:0016208 [list] [network] AMP binding  (3 genes)  IEA  
Protein XP_001700210.2 [sequence] [blastp]
Subcellular
localization
wolf
cyto 6,  mito 1,  chlo 1,  pero 1,  cysk 1,  cyto_mito 1,  mito_plas 1  (predict for XP_001700210.2)
Subcellular
localization
TargetP
other 9  (predict for XP_001700210.2)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

cre-r.1
for
CHLRE_01g071662v5

.
ath-u.5
for
ACS

.
gma-u.5
for
100808939

.
gma-u.5
for
100789257

.
sly-u.5
for
101264442

.
sly-u.5
for
101256234

.
osa-u.5
for
4329518

.
osa-u.5
for
4335745

.
zma-u.5
for
103646525

.
zma-u.5
for
100279194

.
vvi-u.5
for
100263518

.
ppo-u.5
for
7458000

.
mtr-u.5
for
11437257

.


Ortholog ID: 4792
Species ath gma gma sly sly osa osa zma zma bra vvi ppo mtr tae tae hvu hvu ghi ghi bna bna cre cre sbi sbi sot sot cit bdi bdi nta nta
Symbol ACS LOC100789257 LOC100808939 LOC101256234 LOC101264442 LOC4329518 LOC4335745 LOC103646525 LOC100279194 LOC103864286 LOC100263518 LOC7458000 LOC11437257 LOC123139862 LOC123189120 LOC123426617 LOC123401074 LOC107962385 LOC121218630 LOC106420757 LOC106446375 CHLRE_01g055408v5 CHLRE_07g353450v5 LOC8059611 LOC8075248 LOC102594153 LOC102581384 LOC102615660 LOC100827025 LOC100839844 LOC107773513 LOC107763835
Function* acetyl-CoA synthetase acetyl-coenzyme A synthetase, chloroplastic/glyoxysomal acetyl-coenzyme A synthetase, chloroplastic/glyoxysomal acetyl-coenzyme A synthetase, chloroplastic/glyoxysomal-like acetyl-coenzyme A synthetase, chloroplastic/glyoxysomal-like acetyl-coenzyme A synthetase, chloroplastic/glyoxysomal acetyl-coenzyme A synthetase, chloroplastic/glyoxysomal acetyl-coenzyme A synthetase, chloroplastic/glyoxysomal uncharacterized LOC100279194 acetyl-coenzyme A synthetase, chloroplastic/glyoxysomal acetyl-coenzyme A synthetase, chloroplastic/glyoxysomal acetyl-coenzyme A synthetase, chloroplastic/glyoxysomal acetyl-coenzyme A synthetase, chloroplastic/glyoxysomal acetyl-coenzyme A synthetase, chloroplastic/glyoxysomal acetyl-coenzyme A synthetase, chloroplastic/glyoxysomal acetyl-coenzyme A synthetase, chloroplastic/glyoxysomal-like acetyl-coenzyme A synthetase, chloroplastic/glyoxysomal-like acetyl-coenzyme A synthetase, chloroplastic/glyoxysomal acetyl-coenzyme A synthetase, chloroplastic/glyoxysomal acetyl-coenzyme A synthetase, chloroplastic/glyoxysomal acetyl-coenzyme A synthetase, chloroplastic/glyoxysomal uncharacterized protein uncharacterized protein acetyl-coenzyme A synthetase, chloroplastic/glyoxysomal acetyl-coenzyme A synthetase, chloroplastic/glyoxysomal acetyl-coenzyme A synthetase, chloroplastic/glyoxysomal acetyl-coenzyme A synthetase, chloroplastic/glyoxysomal-like acetyl-coenzyme A synthetase, chloroplastic/glyoxysomal acetyl-coenzyme A synthetase, chloroplastic/glyoxysomal acetyl-coenzyme A synthetase, chloroplastic/glyoxysomal acetyl-coenzyme A synthetase, chloroplastic/glyoxysomal-like acetyl-coenzyme A synthetase, chloroplastic/glyoxysomal
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath01200 Carbon metabolism 7
ath00020 Citrate cycle (TCA cycle) 4
ath00630 Glyoxylate and dicarboxylate metabolism 3
ath01210 2-Oxocarboxylic acid metabolism 3
ath00640 Propanoate metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma00010 Glycolysis / Gluconeogenesis 16
gma01200 Carbon metabolism 12
gma01230 Biosynthesis of amino acids 12
gma00620 Pyruvate metabolism 8
gma00710 Carbon fixation by Calvin cycle 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma01230 Biosynthesis of amino acids 9
gma01200 Carbon metabolism 6
gma00620 Pyruvate metabolism 5
gma00400 Phenylalanine, tyrosine and tryptophan biosynthesis 5
gma00640 Propanoate metabolism 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03060 Protein export 2
sly00230 Purine metabolism 2
sly00970 Aminoacyl-tRNA biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly04141 Protein processing in endoplasmic reticulum 3
sly00510 N-Glycan biosynthesis 2
sly00513 Various types of N-glycan biosynthesis 2
sly00630 Glyoxylate and dicarboxylate metabolism 2
sly01200 Carbon metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa01200 Carbon metabolism 12
osa00020 Citrate cycle (TCA cycle) 6
osa01230 Biosynthesis of amino acids 6
osa00630 Glyoxylate and dicarboxylate metabolism 5
osa00010 Glycolysis / Gluconeogenesis 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa00460 Cyanoamino acid metabolism 2
osa00500 Starch and sucrose metabolism 2
osa00999 Biosynthesis of various plant secondary metabolites 2
osa00010 Glycolysis / Gluconeogenesis 2
osa01200 Carbon metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma01200 Carbon metabolism 4
zma00010 Glycolysis / Gluconeogenesis 3
zma00710 Carbon fixation by Calvin cycle 3
zma01230 Biosynthesis of amino acids 3
zma00051 Fructose and mannose metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma00520 Amino sugar and nucleotide sugar metabolism 5
zma01250 Biosynthesis of nucleotide sugars 5
zma01240 Biosynthesis of cofactors 3
zma01200 Carbon metabolism 3
zma00010 Glycolysis / Gluconeogenesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra01200 Carbon metabolism 4
bra01230 Biosynthesis of amino acids 4
bra00480 Glutathione metabolism 4
bra00920 Sulfur metabolism 3
bra00270 Cysteine and methionine metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi00400 Phenylalanine, tyrosine and tryptophan biosynthesis 3
vvi01230 Biosynthesis of amino acids 3
vvi00480 Glutathione metabolism 2
vvi00520 Amino sugar and nucleotide sugar metabolism 2
vvi01250 Biosynthesis of nucleotide sugars 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo00190 Oxidative phosphorylation 7
ppo04145 Phagosome 4
ppo00620 Pyruvate metabolism 3
ppo00630 Glyoxylate and dicarboxylate metabolism 3
ppo01200 Carbon metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr04141 Protein processing in endoplasmic reticulum 5
mtr00010 Glycolysis / Gluconeogenesis 3
mtr01200 Carbon metabolism 3
mtr00620 Pyruvate metabolism 2
mtr01230 Biosynthesis of amino acids 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00010 Glycolysis / Gluconeogenesis 6
tae00620 Pyruvate metabolism 3
tae00630 Glyoxylate and dicarboxylate metabolism 3
tae00640 Propanoate metabolism 3
tae01200 Carbon metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00010 Glycolysis / Gluconeogenesis 3
tae00620 Pyruvate metabolism 3
tae00630 Glyoxylate and dicarboxylate metabolism 3
tae00640 Propanoate metabolism 3
tae01200 Carbon metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu01200 Carbon metabolism 3
hvu00400 Phenylalanine, tyrosine and tryptophan biosynthesis 2
hvu01230 Biosynthesis of amino acids 2
hvu00030 Pentose phosphate pathway 2
hvu00480 Glutathione metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00010 Glycolysis / Gluconeogenesis 4
ghi00620 Pyruvate metabolism 4
ghi00630 Glyoxylate and dicarboxylate metabolism 4
ghi00640 Propanoate metabolism 4
ghi01200 Carbon metabolism 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00010 Glycolysis / Gluconeogenesis 4
ghi00620 Pyruvate metabolism 4
ghi00630 Glyoxylate and dicarboxylate metabolism 4
ghi00640 Propanoate metabolism 4
ghi01200 Carbon metabolism 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00190 Oxidative phosphorylation 8
bna04145 Phagosome 8
bna04141 Protein processing in endoplasmic reticulum 8
bna03015 mRNA surveillance pathway 3
bna04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00190 Oxidative phosphorylation 8
bna04145 Phagosome 8
bna04141 Protein processing in endoplasmic reticulum 8
bna03015 mRNA surveillance pathway 3
bna04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cre00630 Glyoxylate and dicarboxylate metabolism 4
cre01200 Carbon metabolism 4
cre00620 Pyruvate metabolism 3
cre00010 Glycolysis / Gluconeogenesis 2
cre00640 Propanoate metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cre01200 Carbon metabolism 4
cre00630 Glyoxylate and dicarboxylate metabolism 3
cre00010 Glycolysis / Gluconeogenesis 2
cre00620 Pyruvate metabolism 2
cre00640 Propanoate metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi04145 Phagosome 2
sbi04517 IgSF CAM signaling 2
sbi04814 Motor proteins 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi00190 Oxidative phosphorylation 5
sbi04145 Phagosome 5
sbi00010 Glycolysis / Gluconeogenesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot01200 Carbon metabolism 3
sot00020 Citrate cycle (TCA cycle) 3
sot00100 Steroid biosynthesis 2
sot00909 Sesquiterpenoid and triterpenoid biosynthesis 2
sot00900 Terpenoid backbone biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi00630 Glyoxylate and dicarboxylate metabolism 5
bdi01200 Carbon metabolism 4
bdi00260 Glycine, serine and threonine metabolism 3
bdi00670 One carbon pool by folate 2
bdi00970 Aminoacyl-tRNA biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi04144 Endocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta04144 Endocytosis 4
nta00620 Pyruvate metabolism 3
nta04016 MAPK signaling pathway - plant 2
nta00010 Glycolysis / Gluconeogenesis 2
nta00630 Glyoxylate and dicarboxylate metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta04144 Endocytosis 2
nta00010 Glycolysis / Gluconeogenesis 2
nta00620 Pyruvate metabolism 2
nta00630 Glyoxylate and dicarboxylate metabolism 2
nta00640 Propanoate metabolism 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 833655 100789257 100808939 101256234 101264442 4329518 4335745 103646525 100279194 103864286 100263518 7458000 11437257 123139862 123189120 123426617 123401074 107962385 121218630 106420757 106446375 5725731 5727586 8059611 8075248 102594153 102581384 102615660 100827025 100839844 107773513 107763835
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