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Orthologous genes in OrthoFinder**

Species Gene Description
 cre-r.1   CHLRE_02g142146v5   uncharacterized protein 
 ath-u.5   HCF244   NAD(P)-binding Rossmann-fold superfamily protein 
 gma-u.5   100797608   protein HIGH CHLOROPHYLL FLUORESCENCE PHENOTYPE 244, chloroplastic 
 sly-u.5   101252442   protein HIGH CHLOROPHYLL FLUORESCENCE PHENOTYPE 244, chloroplastic 
 osa-u.5   4346272   protein HIGH CHLOROPHYLL FLUORESCENCE PHENOTYPE 244, chloroplastic 
 zma-u.5   100192036   NAD(P)-binding Rossmann-fold superfamily protein 
 bra-r.6   103834293   protein HIGH CHLOROPHYLL FLUORESCENCE PHENOTYPE 244, chloroplastic 
 vvi-u.5   100241886   protein HIGH CHLOROPHYLL FLUORESCENCE PHENOTYPE 244, chloroplastic 
 ppo-u.5   18102176   protein HIGH CHLOROPHYLL FLUORESCENCE PHENOTYPE 244, chloroplastic 
 ppo-u.5   7466815   protein HIGH CHLOROPHYLL FLUORESCENCE PHENOTYPE 244, chloroplastic 
 mtr-u.5   11418459   protein HIGH CHLOROPHYLL FLUORESCENCE PHENOTYPE 244, chloroplastic 
 tae-r.2   123165992   protein HIGH CHLOROPHYLL FLUORESCENCE PHENOTYPE 244, chloroplastic 
 tae-r.2   123157908   protein HIGH CHLOROPHYLL FLUORESCENCE PHENOTYPE 244, chloroplastic 
 tae-r.2   123152614   protein HIGH CHLOROPHYLL FLUORESCENCE PHENOTYPE 244, chloroplastic 
 hvu-r.1   123410776   protein HIGH CHLOROPHYLL FLUORESCENCE PHENOTYPE 244, chloroplastic 
 ghi-r.1   107939390   protein HIGH CHLOROPHYLL FLUORESCENCE PHENOTYPE 244, chloroplastic 
 ghi-r.1   107908618   protein HIGH CHLOROPHYLL FLUORESCENCE PHENOTYPE 244, chloroplastic 
 bna-r.1   106434635   protein HIGH CHLOROPHYLL FLUORESCENCE PHENOTYPE 244, chloroplastic-like 
 bna-r.1   106421808   protein HIGH CHLOROPHYLL FLUORESCENCE PHENOTYPE 244, chloroplastic 
 sbi-r.1   8058013   uncharacterized protein ycf39 
 sot-r.1   102603364   uncharacterized protein ycf39 
 cit-r.1   102624152   hypothetical protein 
 bdi-r.1   100845415   uncharacterized protein ycf39 
 nta-r.1   107825308   protein HIGH CHLOROPHYLL FLUORESCENCE PHENOTYPE 244, chloroplastic 
 nta-r.1   107826653   protein HIGH CHLOROPHYLL FLUORESCENCE PHENOTYPE 244, chloroplastic-like 

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Top 50 coexpressed genes to CHLRE_02g142146v5 (cre-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to CHLRE_02g142146v5 (cre-r.1 coexpression data)

CoexMap"5726058"


creCHLRE_02g142146v5 | Entrez gene ID : 5726058      
Species cre ath gma sly osa zma bra vvi ppo mtr tae hvu ghi bna sbi sot cit bdi nta
Paralog 1 1 1 1 1 1 1 1 2 1 3 1 2 2 1 1 1 1 2
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO CC
GO MF
Protein XP_001700491.1 [sequence] [blastp]
Subcellular
localization
wolf
chlo 9  (predict for XP_001700491.1)
Subcellular
localization
TargetP
mito 7,  chlo 3  (predict for XP_001700491.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

cre-r.1
for
CHLRE_02g142146v5
ath-u.5
for
HCF244
gma-u.5
for
100797608
sly-u.5
for
101252442
osa-u.5
for
4346272
zma-u.5
for
100192036
bra-r.6
for
103834293
vvi-u.5
for
100241886
ppo-u.5
for
18102176
ppo-u.5
for
7466815
mtr-u.5
for
11418459
tae-r.2
for
123165992
tae-r.2
for
123157908
tae-r.2
for
123152614
hvu-r.1
for
123410776
ghi-r.1
for
107939390
ghi-r.1
for
107908618
bna-r.1
for
106434635
bna-r.1
for
106421808
sbi-r.1
for
8058013
sot-r.1
for
102603364
cit-r.1
for
102624152
bdi-r.1
for
100845415
nta-r.1
for
107825308
nta-r.1
for
107826653


Ortholog ID: 10255
Species cre ath gma sly osa zma bra vvi ppo ppo mtr tae tae tae hvu ghi ghi bna bna sbi sot cit bdi nta nta
Symbol CHLRE_02g142146v5 HCF244 LOC100797608 LOC101252442 LOC4346272 LOC100192036 LOC103834293 LOC100241886 LOC18102176 LOC7466815 LOC11418459 LOC123165992 LOC123157908 LOC123152614 LOC123410776 LOC107939390 LOC107908618 LOC106434635 LOC106421808 LOC8058013 LOC102603364 LOC102624152 LOC100845415 LOC107825308 LOC107826653
Function* uncharacterized protein NAD(P)-binding Rossmann-fold superfamily protein protein HIGH CHLOROPHYLL FLUORESCENCE PHENOTYPE 244, chloroplastic protein HIGH CHLOROPHYLL FLUORESCENCE PHENOTYPE 244, chloroplastic protein HIGH CHLOROPHYLL FLUORESCENCE PHENOTYPE 244, chloroplastic NAD(P)-binding Rossmann-fold superfamily protein protein HIGH CHLOROPHYLL FLUORESCENCE PHENOTYPE 244, chloroplastic protein HIGH CHLOROPHYLL FLUORESCENCE PHENOTYPE 244, chloroplastic protein HIGH CHLOROPHYLL FLUORESCENCE PHENOTYPE 244, chloroplastic protein HIGH CHLOROPHYLL FLUORESCENCE PHENOTYPE 244, chloroplastic protein HIGH CHLOROPHYLL FLUORESCENCE PHENOTYPE 244, chloroplastic protein HIGH CHLOROPHYLL FLUORESCENCE PHENOTYPE 244, chloroplastic protein HIGH CHLOROPHYLL FLUORESCENCE PHENOTYPE 244, chloroplastic protein HIGH CHLOROPHYLL FLUORESCENCE PHENOTYPE 244, chloroplastic protein HIGH CHLOROPHYLL FLUORESCENCE PHENOTYPE 244, chloroplastic protein HIGH CHLOROPHYLL FLUORESCENCE PHENOTYPE 244, chloroplastic protein HIGH CHLOROPHYLL FLUORESCENCE PHENOTYPE 244, chloroplastic protein HIGH CHLOROPHYLL FLUORESCENCE PHENOTYPE 244, chloroplastic-like protein HIGH CHLOROPHYLL FLUORESCENCE PHENOTYPE 244, chloroplastic uncharacterized protein ycf39 uncharacterized protein ycf39 hypothetical protein uncharacterized protein ycf39 protein HIGH CHLOROPHYLL FLUORESCENCE PHENOTYPE 244, chloroplastic protein HIGH CHLOROPHYLL FLUORESCENCE PHENOTYPE 244, chloroplastic-like
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cre00195 Photosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath00860 Porphyrin metabolism 4
ath01240 Biosynthesis of cofactors 2
ath00130 Ubiquinone and other terpenoid-quinone biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma01200 Carbon metabolism 10
gma00710 Carbon fixation by Calvin cycle 8
gma00030 Pentose phosphate pathway 3
gma00195 Photosynthesis 2
gma01230 Biosynthesis of amino acids 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly00630 Glyoxylate and dicarboxylate metabolism 2
sly01200 Carbon metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03010 Ribosome 3
zma00900 Terpenoid backbone biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra00195 Photosynthesis 2
bra00710 Carbon fixation by Calvin cycle 2
bra01200 Carbon metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi00260 Glycine, serine and threonine metabolism 2
vvi00630 Glyoxylate and dicarboxylate metabolism 2
vvi00670 One carbon pool by folate 2
vvi01200 Carbon metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo00195 Photosynthesis 9
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr00195 Photosynthesis 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00195 Photosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03010 Ribosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu00195 Photosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00010 Glycolysis / Gluconeogenesis 4
bna00030 Pentose phosphate pathway 2
bna00052 Galactose metabolism 2
bna00230 Purine metabolism 2
bna00500 Starch and sucrose metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00010 Glycolysis / Gluconeogenesis 4
bna00030 Pentose phosphate pathway 2
bna00052 Galactose metabolism 2
bna00230 Purine metabolism 2
bna00500 Starch and sucrose metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi04070 Phosphatidylinositol signaling system 2
sbi00710 Carbon fixation by Calvin cycle 2
sbi01200 Carbon metabolism 2
sbi00500 Starch and sucrose metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi01200 Carbon metabolism 4
bdi00710 Carbon fixation by Calvin cycle 3
bdi01230 Biosynthesis of amino acids 3
bdi00030 Pentose phosphate pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00630 Glyoxylate and dicarboxylate metabolism 2
nta01200 Carbon metabolism 2
nta04146 Peroxisome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta01200 Carbon metabolism 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 5726058 829678 100797608 101252442 4346272 100192036 103834293 100241886 18102176 7466815 11418459 123165992 123157908 123152614 123410776 107939390 107908618 106434635 106421808 8058013 102603364 102624152 100845415 107825308 107826653
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