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Orthologous genes in OrthoFinder**

Species Gene Description
 cre-r.1   CHLRE_12g494450v5   uncharacterized protein 
 ath-u.5   rps16   ribosomal protein S16 
 gma-u.5   rps16   ribosomal protein S16 
 sly-u.5   rps16   ribosomal protein S16 
 osa-u.5   rps16   ribosomal protein S16 
 zma-u.5   rps16   ribosomal protein S16 
 vvi-u.5   rps16   ribosomal protein S16 
 ghi-r.1   rps16   ribosomal protein S16 
 sbi-r.1   rps16   ribosomal protein S16 
 sot-r.1   rps16   ribosomal protein S16 
 cit-r.1   rps16   ribosomal protein S16 
 bdi-r.1   rps16   ribosomal protein S16 
 nta-r.1   rps16   ribosomal protein S16 

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Top 50 coexpressed genes to CHLRE_12g494450v5 (cre-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to CHLRE_12g494450v5 (cre-r.1 coexpression data)

CoexMap"5726111"


creCHLRE_12g494450v5 | Entrez gene ID : 5726111      
Species cre ath gma sly osa zma vvi ghi sbi sot cit bdi nta tae bna ppo mtr hvu bra
Paralog 1 1 1 1 1 1 1 1 1 1 1 1 1 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0032543 [list] [network] mitochondrial translation  (16 genes)  IEA  
GO CC
GO:0015935 [list] [network] small ribosomal subunit  (50 genes)  IEA  
GO:0005840 [list] [network] ribosome  (168 genes)  IEA  
GO MF
GO:0003735 [list] [network] structural constituent of ribosome  (164 genes)  IEA  
Protein XP_001700529.1 [sequence] [blastp]
Subcellular
localization
wolf
chlo 6,  nucl 2,  mito 2  (predict for XP_001700529.1)
Subcellular
localization
TargetP
mito 6,  chlo 6  (predict for XP_001700529.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

cre-r.1
for
CHLRE_12g494450v5
ath-u.5
for
rps16
gma-u.5
for
rps16
sly-u.5
for
rps16
osa-u.5
for
rps16
zma-u.5
for
rps16
vvi-u.5
for
rps16
ghi-r.1
for
rps16
sbi-r.1
for
rps16
sot-r.1
for
rps16
cit-r.1
for
rps16
bdi-r.1
for
rps16
nta-r.1
for
rps16


Ortholog ID: 12710
Species cre ath gma sly osa zma vvi ghi sbi sot cit bdi nta
Symbol CHLRE_12g494450v5 rps16 rps16 rps16 rps16 rps16 rps16 rps16 rps16 rps16 rps16 rps16 rps16
Function* uncharacterized protein ribosomal protein S16 ribosomal protein S16 ribosomal protein S16 ribosomal protein S16 ribosomal protein S16 ribosomal protein S16 ribosomal protein S16 ribosomal protein S16 ribosomal protein S16 ribosomal protein S16 ribosomal protein S16 ribosomal protein S16
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cre03010 Ribosome 11
cre01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath00970 Aminoacyl-tRNA biosynthesis 8
ath03010 Ribosome 7
ath00190 Oxidative phosphorylation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03010 Ribosome 6
gma00195 Photosynthesis 3
gma03020 RNA polymerase 2
gma00190 Oxidative phosphorylation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly00190 Oxidative phosphorylation 7
sly03010 Ribosome 3
sly00195 Photosynthesis 2
sly03020 RNA polymerase 2
sly00970 Aminoacyl-tRNA biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03010 Ribosome 12
osa00195 Photosynthesis 5
osa00190 Oxidative phosphorylation 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma00195 Photosynthesis 8
zma03010 Ribosome 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03010 Ribosome 8
vvi00190 Oxidative phosphorylation 8
vvi00195 Photosynthesis 7
vvi00970 Aminoacyl-tRNA biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00195 Photosynthesis 7
ghi03010 Ribosome 4
ghi00970 Aminoacyl-tRNA biosynthesis 3
ghi00190 Oxidative phosphorylation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03010 Ribosome 12
sbi00195 Photosynthesis 3
sbi00190 Oxidative phosphorylation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03010 Ribosome 8
sot00190 Oxidative phosphorylation 6
sot00195 Photosynthesis 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit00190 Oxidative phosphorylation 7
cit00195 Photosynthesis 7
cit03010 Ribosome 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi00195 Photosynthesis 4
bdi03010 Ribosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00195 Photosynthesis 7
nta03010 Ribosome 7
nta00190 Oxidative phosphorylation 4
nta00970 Aminoacyl-tRNA biosynthesis 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 5726111 844798 3989305 3950458 3131439 845232 4025122 3989183 4549140 4099950 4271244 6439809 800493
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