ATTED-II : GeneCoexpression result

Species	Gene	Description
cre-r.1	CHLRE_15g640800v5	uncharacterized protein
ath-u.5	AT4G39160	Homeodomain-like superfamily protein
gma-u.5	100809837	uncharacterized LOC100809837
gma-u.5	100800405	uncharacterized LOC100800405
gma-u.5	100792788	uncharacterized LOC100792788
sly-u.5	101258718	transcription factor TFIIIB component B''
osa-u.5	9267825	uncharacterized LOC9267825
zma-u.5	103627513	G patch domain-containing protein 4
zma-u.5	100304161	transcription factor TFIIIB component B'' homolog
zma-u.5	103628985	uncharacterized LOC103628985
bra-r.6	103828061	uncharacterized LOC103828061
bra-r.6	103835139	glutamic acid-rich protein
vvi-u.5	100854024	uncharacterized LOC100854024
ppo-u.5	7475967	uncharacterized LOC7475967
mtr-u.5	11437440	transcription factor TFIIIB component B''
mtr-u.5	25492665	transcription factor TFIIIB component B''
tae-r.2	123138430	transcription factor TFIIIB component B''
tae-r.2	123061116	uncharacterized LOC123061116
tae-r.2	123182488	uncharacterized LOC123182488
hvu-r.1	123443679	uncharacterized LOC123443679
hvu-r.1	123404070	transcription factor TFIIIB component B''-like
ghi-r.1	107891629	transcription factor TFIIIB component B'' homolog
ghi-r.1	107889049	transcription factor TFIIIB component B'' homolog
bna-r.1	125575824	uncharacterized LOC125575824
bna-r.1	106402511	glutamic acid-rich protein-like
bna-r.1	106366038	uncharacterized LOC106366038
sbi-r.1	8069083	uncharacterized LOC8069083
sbi-r.1	8074021	transcription factor TFIIIB component B''
sot-r.1	102601114	transcription factor TFIIIB component B''
cit-r.1	102613204	transcription factor TFIIIB component B''
bdi-r.1	104581510	uncharacterized LOC104581510
nta-r.1	107815047	uncharacterized LOC107815047
nta-r.1	107797408	uncharacterized LOC107797408
nta-r.1	107811026	uncharacterized LOC107811026

Annotation

functional annotation

KEGG

GO BP

GO:0070898 [list] [network] RNA polymerase III preinitiation complex assembly

(1 genes)

IEA

GO CC

GO:0000126 [list] [network] transcription factor TFIIIB complex

(2 genes)

IEA

GO MF

GO:0001156 [list] [network] TFIIIC-class transcription factor complex binding

(1 genes)

IEA

Protein

XP_042916375.1 [sequence] [blastp]

Subcellular
localization
wolf

nucl 9

(predict for XP_042916375.1)

Subcellular
localization
TargetP

other 8

(predict for XP_042916375.1)

Gene expression

All samples

[Expression pattern]

Tissue specificity^*

Coexpression

	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	Target	Reference
	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	cre-r.1 for CHLRE_15g640800v5	ath-u.5 for AT4G39160	gma-u.5 for 100809837	gma-u.5 for 100800405	gma-u.5 for 100792788	sly-u.5 for 101258718	osa-u.5 for 9267825	zma-u.5 for 103627513	zma-u.5 for 100304161	zma-u.5 for 103628985	bra-r.6 for 103828061	bra-r.6 for 103835139	vvi-u.5 for 100854024	ppo-u.5 for 7475967	mtr-u.5 for 11437440	mtr-u.5 for 25492665	tae-r.2 for 123138430	tae-r.2 for 123061116	tae-r.2 for 123182488	hvu-r.1 for 123443679	hvu-r.1 for 123404070	ghi-r.1 for 107891629	ghi-r.1 for 107889049	bna-r.1 for 125575824	bna-r.1 for 106402511	bna-r.1 for 106366038	sbi-r.1 for 8069083	sbi-r.1 for 8074021	sot-r.1 for 102601114	cit-r.1 for 102613204	bdi-r.1 for 104581510	nta-r.1 for 107815047	nta-r.1 for 107797408	nta-r.1 for 107811026

Ortholog

Ortholog ID: 5160

Species

cre

ath

gma

sly

osa

zma

bra

vvi

ppo

mtr

tae

hvu

ghi

bna

sbi

sot

cit

bdi

nta

Symbol

Function^*

uncharacterized protein

Homeodomain-like superfamily protein

uncharacterized LOC100809837

uncharacterized LOC100800405

transcription factor TFIIIB component B''

uncharacterized LOC9267825

G patch domain-containing protein 4

transcription factor TFIIIB component B'' homolog

uncharacterized LOC103628985

uncharacterized LOC103828061

glutamic acid-rich protein

uncharacterized LOC100854024

uncharacterized LOC7475967

transcription factor TFIIIB component B''

uncharacterized LOC123061116

uncharacterized LOC123182488

uncharacterized LOC123443679

transcription factor TFIIIB component B''-like

transcription factor TFIIIB component B'' homolog

uncharacterized LOC125575824

uncharacterized LOC106366038

glutamic acid-rich protein-like

uncharacterized LOC8069083

transcription factor TFIIIB component B''

uncharacterized LOC104581510

uncharacterized LOC107815047

uncharacterized LOC107797408

uncharacterized LOC107811026

Coexmap

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Coexpression

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KEGG Info

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ath03040	Spliceosome	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma03460	Fanconi anemia pathway	2
gma03018	RNA degradation	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sly03040	Spliceosome	2
sly03460	Fanconi anemia pathway	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
zma03040	Spliceosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
zma03040	Spliceosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
zma03040	Spliceosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bra03008	Ribosome biogenesis in eukaryotes	2
bra03018	RNA degradation	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bra03008	Ribosome biogenesis in eukaryotes	5
bra00970	Aminoacyl-tRNA biosynthesis	4

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ppo03082	ATP-dependent chromatin remodeling	3
ppo03040	Spliceosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
mtr00510	N-Glycan biosynthesis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae03010	Ribosome	3
tae03040	Spliceosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae03013	Nucleocytoplasmic transport	7
tae03015	mRNA surveillance pathway	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae03013	Nucleocytoplasmic transport	5
tae03015	mRNA surveillance pathway	3
tae03040	Spliceosome	3
tae03450	Non-homologous end-joining	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
hvu03008	Ribosome biogenesis in eukaryotes	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi03460	Fanconi anemia pathway	3
ghi00900	Terpenoid backbone biosynthesis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi03460	Fanconi anemia pathway	4
ghi03440	Homologous recombination	2
ghi00900	Terpenoid backbone biosynthesis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sbi03040	Spliceosome	2
sbi03015	mRNA surveillance pathway	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sot03040	Spliceosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
cit03008	Ribosome biogenesis in eukaryotes	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bdi03013	Nucleocytoplasmic transport	4
bdi03040	Spliceosome	4

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta03013	Nucleocytoplasmic transport	2
nta03040	Spliceosome	2
nta03008	Ribosome biogenesis in eukaryotes	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta03008	Ribosome biogenesis in eukaryotes	2
nta03015	mRNA surveillance pathway	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta03008	Ribosome biogenesis in eukaryotes	2
nta03015	mRNA surveillance pathway	2

Expression

Expression pattern

Entrez Gene ID^*

5726152

830071

100809837

100800405

101258718

9267825

103627513

100304161

103628985

103828061

103835139

100854024

7475967

11437440

25492665

123138430

123061116

123182488

123443679

123404070

107891629

107889049

125575824

106366038

106361492

8069083

8074021

102601114

102613204

104581510

107815047

107797408

107811026

Select Species^**

Orthologous genes in OrthoFinder^**

Top 50 coexpressed genes to CHLRE_15g640800v5 (cre-r.1 coexpression data)

Top 50 enrichment test to CHLRE_15g640800v5 (cre-r.1 coexpression data)


Species	cre	ath	gma	sly	osa	zma	bra	vvi	ppo	mtr	tae	hvu	ghi	bna	sbi	sot	cit	bdi	nta
Paralog	1	1	3	1	1	3	2	1	1	2	3	2	2	3	2	1	1	1	3

Select Species**

Orthologous genes in OrthoFinder**

Top 50 coexpressed genes to CHLRE_15g640800v5 (cre-r.1 coexpression data)

Top 50 enrichment test to CHLRE_15g640800v5 (cre-r.1 coexpression data)

Select Species^**

Orthologous genes in OrthoFinder^**