ATTED-II : GeneCoexpression result

Species	Gene	Description
cre-r.1	CHLRE_05g244750v5	uncharacterized protein
ath-u.5	AT1G66510	AAR2 protein family
gma-u.5	100800202	protein AAR2 homolog
gma-u.5	100778021	protein AAR2 homolog
sly-u.5	101259997	uncharacterized LOC101259997
osa-u.5	4335002	uncharacterized LOC4335002
zma-u.5	100283264	cePP protein
bra-r.6	103831112	protein AAR2 homolog
vvi-u.5	100267400	uncharacterized LOC100267400
ppo-u.5	18099398	uncharacterized LOC18099398
mtr-u.5	11439395	protein AAR2 homolog
tae-r.2	123186952	protein AAR2 homolog
tae-r.2	123050995	protein AAR2 homolog
tae-r.2	123043100	protein AAR2 homolog
hvu-r.1	123431498	protein AAR2 homolog
ghi-r.1	107950441	protein AAR2 homolog
ghi-r.1	107915606	protein AAR2 homolog
bna-r.1	106348575	protein AAR2 homolog
bna-r.1	106353886	protein AAR2 homolog
sbi-r.1	8065987	protein AAR2 homolog
sot-r.1	102597990	protein AAR2 homolog
cit-r.1	102610602	uncharacterized LOC102610602
bdi-r.1	100823640	protein AAR2 homolog
nta-r.1	107793749	uncharacterized LOC107793749
nta-r.1	107781751	uncharacterized LOC107781751

Annotation

functional annotation

KEGG

GO BP

GO:0000244 [list] [network] spliceosomal tri-snRNP complex assembly

(4 genes)

IEA

GO CC

GO MF

Protein

XP_042924662.1 [sequence] [blastp]

Subcellular
localization
wolf

E.R. 3, chlo 2, mito 2, chlo_mito 2, cyto_nucl 1, E.R._vacu 1, E.R._plas 1

(predict for XP_042924662.1)

Subcellular
localization
TargetP

other 7

(predict for XP_042924662.1)

Gene expression

All samples

[Expression pattern]

Tissue specificity^*

Coexpression

	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	Target	Reference
	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	cre-r.1 for CHLRE_05g244750v5	ath-u.5 for AT1G66510	gma-u.5 for 100800202	gma-u.5 for 100778021	sly-u.5 for 101259997	osa-u.5 for 4335002	zma-u.5 for 100283264	bra-r.6 for 103831112	vvi-u.5 for 100267400	ppo-u.5 for 18099398	mtr-u.5 for 11439395	tae-r.2 for 123186952	tae-r.2 for 123050995	tae-r.2 for 123043100	hvu-r.1 for 123431498	ghi-r.1 for 107950441	ghi-r.1 for 107915606	bna-r.1 for 106348575	bna-r.1 for 106353886	sbi-r.1 for 8065987	sot-r.1 for 102597990	cit-r.1 for 102610602	bdi-r.1 for 100823640	nta-r.1 for 107793749	nta-r.1 for 107781751

Ortholog

Ortholog ID: 9867

Species

cre

ath

gma

sly

osa

zma

bra

vvi

ppo

mtr

tae

hvu

ghi

bna

sbi

sot

cit

bdi

nta

Symbol

Function^*

uncharacterized protein

AAR2 protein family

protein AAR2 homolog

uncharacterized LOC101259997

uncharacterized LOC4335002

cePP protein

protein AAR2 homolog

uncharacterized LOC100267400

uncharacterized LOC18099398

protein AAR2 homolog

uncharacterized LOC102610602

protein AAR2 homolog

uncharacterized LOC107793749

uncharacterized LOC107781751

Coexmap

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Coexpression

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KEGG Info

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
cre03050	Proteasome	6

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ath04141	Protein processing in endoplasmic reticulum	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma00563	Glycosylphosphatidylinositol (GPI)-anchor biosynthesis	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
osa03018	RNA degradation	2
osa03410	Base excision repair	2
osa03013	Nucleocytoplasmic transport	2
osa03440	Homologous recombination	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
zma03040	Spliceosome	2
zma04141	Protein processing in endoplasmic reticulum	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bra03013	Nucleocytoplasmic transport	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
vvi00970	Aminoacyl-tRNA biosynthesis	3
vvi03440	Homologous recombination	2
vvi03040	Spliceosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ppo04141	Protein processing in endoplasmic reticulum	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
mtr03050	Proteasome	3
mtr03410	Base excision repair	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae03040	Spliceosome	4
tae03022	Basal transcription factors	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae03040	Spliceosome	3
tae00510	N-Glycan biosynthesis	2
tae00513	Various types of N-glycan biosynthesis	2
tae03022	Basal transcription factors	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
hvu03008	Ribosome biogenesis in eukaryotes	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi04141	Protein processing in endoplasmic reticulum	2
ghi04626	Plant-pathogen interaction	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi04141	Protein processing in endoplasmic reticulum	2
ghi04626	Plant-pathogen interaction	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bna03018	RNA degradation	6
bna03040	Spliceosome	4
bna04141	Protein processing in endoplasmic reticulum	3
bna04626	Plant-pathogen interaction	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bna03018	RNA degradation	7
bna04141	Protein processing in endoplasmic reticulum	3
bna04626	Plant-pathogen interaction	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sbi03040	Spliceosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sot04141	Protein processing in endoplasmic reticulum	4
sot03040	Spliceosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
cit04141	Protein processing in endoplasmic reticulum	8

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bdi00520	Amino sugar and nucleotide sugar metabolism	2
bdi03013	Nucleocytoplasmic transport	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta03082	ATP-dependent chromatin remodeling	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta04075	Plant hormone signal transduction	3
nta04626	Plant-pathogen interaction	3

Expression

Expression pattern

Entrez Gene ID^*

5726294

842969

100800202

100778021

101259997

4335002

100283264

103831112

100267400

18099398

11439395

123186952

123050995

123043100

123431498

107950441

107915606

106348575

106353886

8065987

102597990

102610602

100823640

107793749

107781751

Select Species^**

Orthologous genes in OrthoFinder^**

Top 50 coexpressed genes to CHLRE_05g244750v5 (cre-r.1 coexpression data)

Top 50 enrichment test to CHLRE_05g244750v5 (cre-r.1 coexpression data)


Species	cre	ath	gma	sly	osa	zma	bra	vvi	ppo	mtr	tae	hvu	ghi	bna	sbi	sot	cit	bdi	nta
Paralog	1	1	2	1	1	1	1	1	1	1	3	1	2	2	1	1	1	1	2

Select Species**

Orthologous genes in OrthoFinder**

Top 50 coexpressed genes to CHLRE_05g244750v5 (cre-r.1 coexpression data)

Top 50 enrichment test to CHLRE_05g244750v5 (cre-r.1 coexpression data)

Select Species^**

Orthologous genes in OrthoFinder^**