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Orthologous genes in OrthoFinder**

Species Gene Description
 cre-r.1   CHLRE_07g319750v5   uncharacterized protein 
 ath-u.5   RH1   RNA helicase 1 
 gma-u.5   100789424   DEAD-box ATP-dependent RNA helicase 1 
 sly-u.5   101249740   DEAD-box ATP-dependent RNA helicase 1 
 osa-u.5   4331005   DEAD-box ATP-dependent RNA helicase 1-like 
 zma-u.5   103627856   DEAD-box ATP-dependent RNA helicase 1 
 zma-u.5   100383718   uncharacterized LOC100383718 
 vvi-u.5   100258315   DEAD-box ATP-dependent RNA helicase 1 
 ppo-u.5   7461234   DEAD-box ATP-dependent RNA helicase 1 
 mtr-u.5   112421087   DEAD-box ATP-dependent RNA helicase 1 
 mtr-u.5   25501683   DEAD-box ATP-dependent RNA helicase 1 
 mtr-u.5   11430098   DEAD-box ATP-dependent RNA helicase 1 

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Top 50 coexpressed genes to CHLRE_07g319750v5 (cre-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to CHLRE_07g319750v5 (cre-r.1 coexpression data)

CoexMap"5726573"


creCHLRE_07g319750v5 | Entrez gene ID : 5726573    
Species cre ath gma sly osa zma vvi ppo mtr sbi nta bra hvu cit bdi sot tae bna ghi
Paralog 1 1 1 1 1 2 1 1 3 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO CC
GO:0005634 [list] [network] nucleus  (1576 genes)  IEA  
GO MF
GO:0005524 [list] [network] ATP binding  (1223 genes)  IEA  
GO:0003676 [list] [network] nucleic acid binding  (1484 genes)  IEA  
Protein XP_042922524.1 [sequence] [blastp]
Subcellular
localization
wolf
chlo 5,  cyto 3,  chlo_mito 3  (predict for XP_042922524.1)
Subcellular
localization
TargetP
other 5,  chlo 3  (predict for XP_042922524.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

cre-r.1
for
CHLRE_07g319750v5

.
ath-u.5
for
RH1

.
gma-u.5
for
100789424

.
sly-u.5
for
101249740

.
osa-u.5
for
4331005

.
zma-u.5
for
103627856

.
zma-u.5
for
100383718

.
vvi-u.5
for
100258315

.
ppo-u.5
for
7461234

.
mtr-u.5
for
112421087

.
mtr-u.5
for
25501683

.
mtr-u.5
for
11430098

.


Ortholog ID: 7653
Species ath gma sly osa zma zma bra vvi ppo mtr mtr tae hvu ghi ghi bna bna cre sbi sot sot cit bdi nta nta
Symbol RH1 LOC100789424 LOC101249740 LOC4331005 LOC103627856 LOC100383718 LOC103870274 LOC100258315 LOC7461234 LOC11430098 LOC112421087 LOC123145908 LOC123401627 LOC107959969 LOC107905977 LOC106391113 LOC106446775 CHLRE_07g319750v5 LOC8082742 LOC102603589 LOC102580927 LOC102616133 LOC100828093 LOC107780906 LOC107785921
Function* RNA helicase 1 DEAD-box ATP-dependent RNA helicase 1 DEAD-box ATP-dependent RNA helicase 1 DEAD-box ATP-dependent RNA helicase 1-like DEAD-box ATP-dependent RNA helicase 1 uncharacterized LOC100383718 DEAD-box ATP-dependent RNA helicase 1 DEAD-box ATP-dependent RNA helicase 1 DEAD-box ATP-dependent RNA helicase 1 DEAD-box ATP-dependent RNA helicase 1 DEAD-box ATP-dependent RNA helicase 1 DEAD-box ATP-dependent RNA helicase 1 DEAD-box ATP-dependent RNA helicase 1 DEAD-box ATP-dependent RNA helicase 1 DEAD-box ATP-dependent RNA helicase 1 DEAD-box ATP-dependent RNA helicase 1-like DEAD-box ATP-dependent RNA helicase 1-like uncharacterized protein DEAD-box ATP-dependent RNA helicase 1 DEAD-box ATP-dependent RNA helicase 1-like DEAD-box ATP-dependent RNA helicase 1-like DEAD-box ATP-dependent RNA helicase 1 DEAD-box ATP-dependent RNA helicase 1 DEAD-box ATP-dependent RNA helicase 1 DEAD-box ATP-dependent RNA helicase 1
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03018 RNA degradation 2
ath03020 RNA polymerase 2
ath03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03040 Spliceosome 7
gma03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03008 Ribosome biogenesis in eukaryotes 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03010 Ribosome 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03008 Ribosome biogenesis in eukaryotes 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo04141 Protein processing in endoplasmic reticulum 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03018 RNA degradation 3
mtr00130 Ubiquinone and other terpenoid-quinone biosynthesis 2
mtr01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr00130 Ubiquinone and other terpenoid-quinone biosynthesis 2
mtr01240 Biosynthesis of cofactors 2
mtr03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03008 Ribosome biogenesis in eukaryotes 7
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03008 Ribosome biogenesis in eukaryotes 6
hvu03010 Ribosome 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03008 Ribosome biogenesis in eukaryotes 4
ghi00230 Purine metabolism 2
ghi00250 Alanine, aspartate and glutamate metabolism 2
ghi03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03008 Ribosome biogenesis in eukaryotes 4
ghi00230 Purine metabolism 2
ghi00250 Alanine, aspartate and glutamate metabolism 2
ghi03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03008 Ribosome biogenesis in eukaryotes 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03008 Ribosome biogenesis in eukaryotes 3
sbi00970 Aminoacyl-tRNA biosynthesis 2
sbi03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03040 Spliceosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03008 Ribosome biogenesis in eukaryotes 5
bdi03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00030 Pentose phosphate pathway 2
nta00230 Purine metabolism 2
nta01200 Carbon metabolism 2
nta01230 Biosynthesis of amino acids 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00030 Pentose phosphate pathway 2
nta00230 Purine metabolism 2
nta01200 Carbon metabolism 2
nta01230 Biosynthesis of amino acids 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 827266 100789424 101249740 4331005 103627856 100383718 103870274 100258315 7461234 11430098 112421087 123145908 123401627 107959969 107905977 106391113 106446775 5726573 8082742 102603589 102580927 102616133 100828093 107780906 107785921
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