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Orthologous genes in OrthoFinder**

Species Gene Description
 cre-r.1   CHLRE_02g078100v5   uncharacterized protein 
 ath-u.5   AT1G21160   eukaryotic translation initiation factor 2 (eIF-2) family protein 
 ath-u.5   AT1G76720   eukaryotic translation initiation factor 2 (eIF-2) family protein 
 gma-u.5   100814875   eukaryotic translation initiation factor 5B 
 gma-u.5   100814640   eukaryotic translation initiation factor 5B 
 sly-u.5   101255564   eukaryotic translation initiation factor 5B-like 
 sly-u.5   101255599   eukaryotic translation initiation factor 5B-like 
 sly-u.5   101254977   eukaryotic translation initiation factor 5B 
 osa-u.5   4339796   eukaryotic translation initiation factor 5B 
 zma-u.5   100384185   uncharacterized LOC100384185 
 bra-r.6   103835756   eukaryotic translation initiation factor 5B 
 bra-r.6   103853047   eukaryotic translation initiation factor 5B 
 vvi-u.5   100242745   eukaryotic translation initiation factor 5B 
 ppo-u.5   7454021   eukaryotic translation initiation factor 5B 
 mtr-u.5   25499339   eukaryotic translation initiation factor 5B 
 mtr-u.5   11422436   eukaryotic translation initiation factor 5B 
 mtr-u.5   11428012   eukaryotic translation initiation factor 5B 
 tae-r.2   123149685   eukaryotic translation initiation factor 5B 
 tae-r.2   123157137   eukaryotic translation initiation factor 5B 
 tae-r.2   123183378   eukaryotic translation initiation factor 5B 
 hvu-r.1   123452620   eukaryotic translation initiation factor 5B 
 ghi-r.1   107933369   eukaryotic translation initiation factor 5B 
 ghi-r.1   107898638   eukaryotic translation initiation factor 5B 
 bna-r.1   106414339   eukaryotic translation initiation factor 5B 
 bna-r.1   111202932   eukaryotic translation initiation factor 5B 
 bna-r.1   106397661   eukaryotic translation initiation factor 5B-like 
 sbi-r.1   8064576   eukaryotic translation initiation factor 5B 
 sbi-r.1   8066564   eukaryotic translation initiation factor 5B 
 sot-r.1   102598850   eukaryotic translation initiation factor 5B-like 
 sot-r.1   102599173   eukaryotic translation initiation factor 5B-like 
 sot-r.1   102604773   eukaryotic translation initiation factor 5B-like 
 cit-r.1   102609379   eukaryotic translation initiation factor 5B 
 bdi-r.1   100838847   eukaryotic translation initiation factor 5B 
 bdi-r.1   100824211   eukaryotic translation initiation factor 5B 
 nta-r.1   107763352   uncharacterized LOC107763352 
 nta-r.1   107788926   uncharacterized LOC107788926 
 nta-r.1   107796952   uncharacterized LOC107796952 

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Top 50 coexpressed genes to CHLRE_02g078100v5 (cre-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to CHLRE_02g078100v5 (cre-r.1 coexpression data)

CoexMap"5727246"


creCHLRE_02g078100v5 | Entrez gene ID : 5727246      
Species cre ath gma sly osa zma bra vvi ppo mtr tae hvu ghi bna sbi sot cit bdi nta
Paralog 1 2 2 3 1 1 2 1 1 3 3 1 2 3 2 3 1 2 3
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO CC
GO MF
GO:0000049 [list] [network] tRNA binding  (34 genes)  IEA  
GO:0003743 [list] [network] translation initiation factor activity  (37 genes)  IEA  
GO:0003924 [list] [network] GTPase activity  (103 genes)  IEA  
GO:0005525 [list] [network] GTP binding  (130 genes)  IEA  
Protein XP_042926817.1 [sequence] [blastp]
Subcellular
localization
wolf
nucl 9,  cyto 1,  mito 1  (predict for XP_042926817.1)
Subcellular
localization
TargetP
other 8  (predict for XP_042926817.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

cre-r.1
for
CHLRE_02g078100v5
ath-u.5
for
AT1G21160
ath-u.5
for
AT1G76720
gma-u.5
for
100814875
gma-u.5
for
100814640
sly-u.5
for
101255564
sly-u.5
for
101255599
sly-u.5
for
101254977
osa-u.5
for
4339796
zma-u.5
for
100384185
bra-r.6
for
103835756
bra-r.6
for
103853047
vvi-u.5
for
100242745
ppo-u.5
for
7454021
mtr-u.5
for
25499339
mtr-u.5
for
11422436
mtr-u.5
for
11428012
tae-r.2
for
123149685
tae-r.2
for
123157137
tae-r.2
for
123183378
hvu-r.1
for
123452620
ghi-r.1
for
107933369
ghi-r.1
for
107898638
bna-r.1
for
106414339
bna-r.1
for
111202932
bna-r.1
for
106397661
sbi-r.1
for
8064576
sbi-r.1
for
8066564
sot-r.1
for
102598850
sot-r.1
for
102599173
sot-r.1
for
102604773
cit-r.1
for
102609379
bdi-r.1
for
100838847
bdi-r.1
for
100824211
nta-r.1
for
107763352
nta-r.1
for
107788926
nta-r.1
for
107796952


Ortholog ID: 3309
Species cre ath ath gma gma sly sly sly osa zma bra bra vvi ppo mtr mtr mtr tae tae tae hvu ghi ghi bna bna bna sbi sbi sot sot sot cit bdi bdi nta nta nta
Symbol CHLRE_02g078100v5 AT1G21160 AT1G76720 LOC100814875 LOC100814640 LOC101255564 LOC101255599 LOC101254977 LOC4339796 LOC100384185 LOC103835756 LOC103853047 LOC100242745 LOC7454021 LOC25499339 LOC11428012 LOC11428401 LOC123149685 LOC123183378 LOC123070760 LOC123452620 LOC107933369 LOC107898638 LOC106414339 LOC111202932 LOC106376729 LOC8064576 LOC8066564 LOC102599173 LOC107057758 LOC107057719 LOC102609379 LOC100838847 LOC100824211 LOC107763352 LOC107788926 LOC107794762
Function* uncharacterized protein eukaryotic translation initiation factor 2 (eIF-2) family protein eukaryotic translation initiation factor 2 (eIF-2) family protein eukaryotic translation initiation factor 5B eukaryotic translation initiation factor 5B eukaryotic translation initiation factor 5B-like eukaryotic translation initiation factor 5B-like eukaryotic translation initiation factor 5B eukaryotic translation initiation factor 5B uncharacterized LOC100384185 eukaryotic translation initiation factor 5B eukaryotic translation initiation factor 5B eukaryotic translation initiation factor 5B eukaryotic translation initiation factor 5B eukaryotic translation initiation factor 5B eukaryotic translation initiation factor 5B eukaryotic translation initiation factor 5B eukaryotic translation initiation factor 5B eukaryotic translation initiation factor 5B eukaryotic translation initiation factor 5B eukaryotic translation initiation factor 5B eukaryotic translation initiation factor 5B eukaryotic translation initiation factor 5B eukaryotic translation initiation factor 5B eukaryotic translation initiation factor 5B eukaryotic translation initiation factor 5B eukaryotic translation initiation factor 5B eukaryotic translation initiation factor 5B eukaryotic translation initiation factor 5B-like eukaryotic translation initiation factor 5B-like eukaryotic translation initiation factor 5B-like eukaryotic translation initiation factor 5B eukaryotic translation initiation factor 5B eukaryotic translation initiation factor 5B uncharacterized LOC107763352 uncharacterized LOC107788926 uncharacterized LOC107794762
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cre01230 Biosynthesis of amino acids 5
cre00400 Phenylalanine, tyrosine and tryptophan biosynthesis 3
cre00340 Histidine metabolism 2
cre00350 Tyrosine metabolism 2
cre00360 Phenylalanine metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03040 Spliceosome 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03040 Spliceosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03040 Spliceosome 3
osa03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03040 Spliceosome 3
vvi03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03040 Spliceosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03040 Spliceosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr01200 Carbon metabolism 6
mtr01230 Biosynthesis of amino acids 4
mtr00010 Glycolysis / Gluconeogenesis 3
mtr00620 Pyruvate metabolism 3
mtr00020 Citrate cycle (TCA cycle) 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03013 Nucleocytoplasmic transport 4
tae03040 Spliceosome 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03030 DNA replication 2
tae03410 Base excision repair 2
tae03420 Nucleotide excision repair 2
tae03430 Mismatch repair 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03440 Homologous recombination 3
bna00500 Starch and sucrose metabolism 2
bna03082 ATP-dependent chromatin remodeling 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03082 ATP-dependent chromatin remodeling 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03040 Spliceosome 2
sbi03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03010 Ribosome 6
sot00190 Oxidative phosphorylation 4
sot00195 Photosynthesis 3
sot03020 RNA polymerase 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03008 Ribosome biogenesis in eukaryotes 2
cit03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03010 Ribosome 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03420 Nucleotide excision repair 2
nta03440 Homologous recombination 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03420 Nucleotide excision repair 2
nta03440 Homologous recombination 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03420 Nucleotide excision repair 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 5727246 838712 844006 100814875 100814640 101255564 101255599 101254977 4339796 100384185 103835756 103853047 100242745 7454021 25499339 11428012 11428401 123149685 123183378 123070760 123452620 107933369 107898638 106414339 111202932 106376729 8064576 8066564 102599173 107057758 107057719 102609379 100838847 100824211 107763352 107788926 107794762
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