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Orthologous genes in OrthoFinder**

Species Gene Description
 cre-r.1   CHLRE_02g079850v5   uncharacterized protein 
 ath-u.5   AT1G49980   DNA/RNA polymerases superfamily protein 
 gma-u.5   100816973   DNA polymerase kappa 
 sly-u.5   101263644   DNA polymerase kappa 
 zma-u.5   100381652   uncharacterized LOC100381652 
 vvi-u.5   100253205   DNA polymerase kappa 
 ppo-u.5   7465079   DNA polymerase kappa 
 mtr-u.5   11437908   DNA polymerase kappa 

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Top 50 coexpressed genes to CHLRE_02g079850v5 (cre-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to CHLRE_02g079850v5 (cre-r.1 coexpression data)

CoexMap"5727282"


creCHLRE_02g079850v5 | Entrez gene ID : 5727282    
Species cre ath gma sly zma vvi ppo mtr sbi nta bra osa hvu cit bdi sot tae bna ghi
Paralog 1 1 1 1 1 1 1 1 0 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG cre03460 [list] [network] Fanconi anemia pathway (16 genes)
GO BP
GO:0042276 [list] [network] error-prone translesion synthesis  (10 genes)  IEA  
GO CC
GO:0005634 [list] [network] nucleus  (1576 genes)  IEA  
GO MF
GO:0003887 [list] [network] DNA-directed DNA polymerase activity  (22 genes)  IEA  
GO:0003684 [list] [network] damaged DNA binding  (27 genes)  IEA  
Protein XP_001701677.2 [sequence] [blastp]
Subcellular
localization
wolf
nucl 5,  cyto 2,  pero 1,  cyto_plas 1  (predict for XP_001701677.2)
Subcellular
localization
TargetP
other 9  (predict for XP_001701677.2)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

cre-r.1
for
CHLRE_02g079850v5

.
ath-u.5
for
AT1G49980

.
gma-u.5
for
100816973

.
sly-u.5
for
101263644

.
zma-u.5
for
100381652

.
vvi-u.5
for
100253205

.
ppo-u.5
for
7465079

.
mtr-u.5
for
11437908

.


Ortholog ID: 12495
Species ath gma sly zma bra vvi ppo mtr ghi ghi bna bna cre sot cit bdi nta nta
Symbol AT1G49980 LOC100816973 LOC101263644 LOC100381652 LOC103871374 LOC100253205 LOC7465079 LOC11437908 LOC107886941 LOC107908838 LOC106349699 LOC106346149 CHLRE_02g079850v5 LOC102583515 LOC102631401 LOC100839865 LOC107785261 LOC107820462
Function* DNA/RNA polymerases superfamily protein DNA polymerase kappa DNA polymerase kappa uncharacterized LOC100381652 DNA polymerase kappa DNA polymerase kappa DNA polymerase kappa DNA polymerase kappa DNA polymerase kappa DNA polymerase kappa DNA polymerase kappa-like DNA polymerase kappa uncharacterized protein DNA polymerase kappa DNA polymerase kappa DNA polymerase kappa DNA polymerase kappa-like DNA polymerase kappa
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath01240 Biosynthesis of cofactors 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma04144 Endocytosis 4
gma03013 Nucleocytoplasmic transport 2
gma03015 mRNA surveillance pathway 2
gma03250 Viral life cycle - HIV-1 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03460 Fanconi anemia pathway 2
sly03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03460 Fanconi anemia pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr01240 Biosynthesis of cofactors 3
mtr00130 Ubiquinone and other terpenoid-quinone biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03015 mRNA surveillance pathway 7
ghi00190 Oxidative phosphorylation 3
ghi03460 Fanconi anemia pathway 2
ghi03010 Ribosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03015 mRNA surveillance pathway 7
ghi00190 Oxidative phosphorylation 3
ghi03460 Fanconi anemia pathway 2
ghi03010 Ribosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03460 Fanconi anemia pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03460 Fanconi anemia pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cre03460 Fanconi anemia pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit04136 Autophagy - other 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03015 mRNA surveillance pathway 5
nta03013 Nucleocytoplasmic transport 3
nta03460 Fanconi anemia pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03015 mRNA surveillance pathway 6
nta03013 Nucleocytoplasmic transport 4
nta03460 Fanconi anemia pathway 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 841422 100816973 101263644 100381652 103871374 100253205 7465079 11437908 107886941 107908838 106349699 106346149 5727282 102583515 102631401 100839865 107785261 107820462
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