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Orthologous genes in OrthoFinder**

Species Gene Description
 cre-r.1   CHLRE_02g090650v5   uncharacterized protein 
 ath-u.5   AtSec20   Sec20 family protein 
 gma-u.5   100812474   uncharacterized LOC100812474 
 gma-u.5   100795925   uncharacterized LOC100795925 
 sly-u.5   101268430   uncharacterized LOC101268430 
 osa-u.5   4330214   uncharacterized LOC4330214 
 zma-u.5   100284137   sec20 family protein 
 zma-u.5   100283594   uncharacterized LOC100283594 
 vvi-u.5   100245990   uncharacterized LOC100245990 
 ppo-u.5   7475427   uncharacterized LOC7475427 
 mtr-u.5   11405623   uncharacterized LOC11405623 

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Top 50 coexpressed genes to CHLRE_02g090650v5 (cre-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to CHLRE_02g090650v5 (cre-r.1 coexpression data)

CoexMap"5727474"


creCHLRE_02g090650v5 | Entrez gene ID : 5727474    
Species cre ath gma sly osa zma vvi ppo mtr sbi nta bra hvu cit bdi sot tae bna ghi
Paralog 1 1 2 1 1 2 1 1 1 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0006890 [list] [network] retrograde vesicle-mediated transport, Golgi to endoplasmic reticulum  (15 genes)  IEA  
GO CC
GO:0031201 [list] [network] SNARE complex  (20 genes)  IEA  
GO:0005783 [list] [network] endoplasmic reticulum  (454 genes)  IEA  
GO MF
GO:0005484 [list] [network] SNAP receptor activity  (19 genes)  IEA  
Protein XP_042927050.1 [sequence] [blastp]
Subcellular
localization
wolf
nucl 3,  cyto 1,  cyto_pero 1,  mito 1,  cysk_nucl 1,  E.R._plas 1,  plas 1,  E.R. 1,  pero 1,  chlo_mito 1  (predict for XP_042927050.1)
Subcellular
localization
TargetP
other 5  (predict for XP_042927050.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

cre-r.1
for
CHLRE_02g090650v5

.
ath-u.5
for
AtSec20

.
gma-u.5
for
100812474

.
gma-u.5
for
100795925

.
sly-u.5
for
101268430

.
osa-u.5
for
4330214

.
zma-u.5
for
100284137

.
zma-u.5
for
100283594

.
vvi-u.5
for
100245990

.
ppo-u.5
for
7475427

.
mtr-u.5
for
11405623

.


Ortholog ID: 6884
Species ath gma gma sly osa zma zma bra vvi ppo mtr tae tae hvu ghi ghi bna bna cre sbi sbi sot cit bdi nta nta
Symbol AtSec20 LOC100795925 LOC100812474 LOC101268430 LOC4330214 LOC100283594 LOC100284137 LOC103828645 LOC100245990 LOC7475427 LOC11405623 LOC123145034 LOC123127941 LOC123402295 LOC107940129 LOC107932115 BNAC07G08480D LOC106453297 CHLRE_02g090650v5 LOC8063034 LOC8059053 LOC102580342 LOC102611581 LOC100825105 LOC107796310 LOC107812449
Function* Sec20 family protein uncharacterized LOC100795925 uncharacterized LOC100812474 uncharacterized LOC101268430 uncharacterized LOC4330214 uncharacterized LOC100283594 sec20 family protein uncharacterized LOC103828645 uncharacterized LOC100245990 uncharacterized LOC7475427 uncharacterized LOC11405623 uncharacterized LOC123145034 uncharacterized LOC123127941 uncharacterized LOC123402295 uncharacterized LOC107940129 uncharacterized LOC107932115 uncharacterized BNAC07G08480D uncharacterized LOC106453297 uncharacterized protein uncharacterized LOC8063034 uncharacterized LOC8059053 uncharacterized LOC102580342 uncharacterized LOC102611581 uncharacterized LOC100825105 uncharacterized LOC107796310 uncharacterized LOC107812449
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath04130 SNARE interactions in vesicular transport 3
ath04142 Lysosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03040 Spliceosome 7
gma04130 SNARE interactions in vesicular transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03040 Spliceosome 3
gma04130 SNARE interactions in vesicular transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly04141 Protein processing in endoplasmic reticulum 2
sly04130 SNARE interactions in vesicular transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa04120 Ubiquitin mediated proteolysis 3
osa04146 Peroxisome 2
osa04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03040 Spliceosome 5
zma04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma04120 Ubiquitin mediated proteolysis 5
zma03420 Nucleotide excision repair 3
zma04141 Protein processing in endoplasmic reticulum 2
zma03018 RNA degradation 2
zma03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi04130 SNARE interactions in vesicular transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo04130 SNARE interactions in vesicular transport 3
ppo03060 Protein export 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr04144 Endocytosis 2
mtr04130 SNARE interactions in vesicular transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae04130 SNARE interactions in vesicular transport 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi04130 SNARE interactions in vesicular transport 2
ghi03015 mRNA surveillance pathway 2
ghi04136 Autophagy - other 2
ghi04382 Cornified envelope formation 2
ghi04626 Plant-pathogen interaction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03082 ATP-dependent chromatin remodeling 2
ghi04130 SNARE interactions in vesicular transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna04130 SNARE interactions in vesicular transport 3
bna00071 Fatty acid degradation 2
bna00280 Valine, leucine and isoleucine degradation 2
bna00310 Lysine degradation 2
bna00360 Phenylalanine metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna04130 SNARE interactions in vesicular transport 3
bna00071 Fatty acid degradation 2
bna00280 Valine, leucine and isoleucine degradation 2
bna00310 Lysine degradation 2
bna00360 Phenylalanine metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cre04141 Protein processing in endoplasmic reticulum 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi04130 SNARE interactions in vesicular transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi04141 Protein processing in endoplasmic reticulum 3
sbi04130 SNARE interactions in vesicular transport 2
sbi03060 Protein export 2
sbi03420 Nucleotide excision repair 2
sbi04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03050 Proteasome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit04120 Ubiquitin mediated proteolysis 3
cit03022 Basal transcription factors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi04144 Endocytosis 2
bdi04130 SNARE interactions in vesicular transport 2
bdi04141 Protein processing in endoplasmic reticulum 2
bdi00190 Oxidative phosphorylation 2
bdi04145 Phagosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta04130 SNARE interactions in vesicular transport 5
nta04145 Phagosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta04130 SNARE interactions in vesicular transport 6
nta04144 Endocytosis 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 822020 100795925 100812474 101268430 4330214 100283594 100284137 103828645 100245990 7475427 11405623 123145034 123127941 123402295 107940129 107932115 106407187 106453297 5727474 8063034 8059053 102580342 102611581 100825105 107796310 107812449
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