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Orthologous genes in OrthoFinder**

Species Gene Description
 cre-r.1   CHLRE_05g232950v5   uncharacterized protein 
 ath-u.5   AT4G08580   microfibrillar-associated protein-like protein 
 ath-u.5   AT5G17900   microfibrillar-associated protein-like protein 
 gma-u.5   100814356   microfibrillar-associated protein 1 
 gma-u.5   100785354   microfibrillar-associated protein 1 
 sly-u.5   101248051   uncharacterized LOC101248051 
 osa-u.5   4329017   uncharacterized LOC4329017 
 zma-u.5   103654338   microfibrillar-associated protein 1 
 bra-r.6   103845891   microfibrillar-associated protein 1A 
 bra-r.6   103856272   microfibrillar-associated protein 1A 
 vvi-u.5   100258185   uncharacterized LOC100258185 
 ppo-u.5   7489700   uncharacterized LOC7489700 
 ppo-u.5   7459186   uncharacterized LOC7459186 
 mtr-u.5   11409733   microfibrillar-associated protein 1 
 tae-r.2   123072089   microfibrillar-associated protein 1 
 tae-r.2   123080377   microfibrillar-associated protein 1 
 tae-r.2   123063186   microfibrillar-associated protein 1 
 hvu-r.1   123445305   microfibrillar-associated protein 1-like 
 ghi-r.1   107891216   microfibrillar-associated protein 1 
 ghi-r.1   107913608   microfibrillar-associated protein 1 
 bna-r.1   125594573   microfibrillar-associated protein 1A-like 
 bna-r.1   106433583   microfibrillar-associated protein 1A-like 
 sbi-r.1   110435675   microfibrillar-associated protein 1-like 
 sot-r.1   102578859   microfibrillar-associated protein 1-like 
 cit-r.1   102615147   uncharacterized LOC102615147 
 bdi-r.1   100838204   microfibrillar-associated protein 1 
 nta-r.1   107817798   uncharacterized LOC107817798 
 nta-r.1   107808711   uncharacterized LOC107808711 

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Top 50 coexpressed genes to CHLRE_05g232950v5 (cre-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to CHLRE_05g232950v5 (cre-r.1 coexpression data)

CoexMap"5727758"


creCHLRE_05g232950v5 | Entrez gene ID : 5727758    
Species cre ath gma sly osa zma bra vvi ppo mtr tae hvu ghi bna sbi sot cit bdi nta
Paralog 1 2 2 1 1 1 2 1 2 1 3 1 2 2 1 1 1 1 2
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0000398 [list] [network] mRNA splicing, via spliceosome  (103 genes)  IEA  
GO CC
GO:0005684 [list] [network] U2-type spliceosomal complex  (36 genes)  IEA  
GO MF
GO:0003723 [list] [network] RNA binding  (670 genes)  IEA  
Protein XP_042924548.1 [sequence] [blastp]
Subcellular
localization
wolf
cyto 5,  nucl 4  (predict for XP_042924548.1)
Subcellular
localization
TargetP
other 8  (predict for XP_042924548.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

cre-r.1
for
CHLRE_05g232950v5
ath-u.5
for
AT4G08580
ath-u.5
for
AT5G17900
gma-u.5
for
100814356
gma-u.5
for
100785354
sly-u.5
for
101248051
osa-u.5
for
4329017
zma-u.5
for
103654338
bra-r.6
for
103845891
bra-r.6
for
103856272
vvi-u.5
for
100258185
ppo-u.5
for
7489700
ppo-u.5
for
7459186
mtr-u.5
for
11409733
tae-r.2
for
123072089
tae-r.2
for
123080377
tae-r.2
for
123063186
hvu-r.1
for
123445305
ghi-r.1
for
107891216
ghi-r.1
for
107913608
bna-r.1
for
125594573
bna-r.1
for
106433583
sbi-r.1
for
110435675
sot-r.1
for
102578859
cit-r.1
for
102615147
bdi-r.1
for
100838204
nta-r.1
for
107817798
nta-r.1
for
107808711


Ortholog ID: 6294
Species cre ath ath gma gma sly osa zma bra bra vvi ppo ppo mtr tae tae tae hvu ghi ghi bna bna bna sbi sot cit bdi nta nta
Symbol CHLRE_05g232950v5 AT4G08580 AT5G17900 LOC100814356 LOC100785354 LOC101248051 LOC4329017 LOC103654338 LOC103845891 LOC103856272 LOC100258185 LOC7489700 LOC7459186 LOC11409733 LOC123072089 LOC123080377 LOC123063186 LOC123445305 LOC107891216 LOC107913608 LOC106433583 LOC106387753 LOC106386533 LOC110435675 LOC102578859 LOC102615147 LOC100838204 LOC107817798 LOC107808711
Function* uncharacterized protein microfibrillar-associated protein-like protein microfibrillar-associated protein-like protein microfibrillar-associated protein 1 microfibrillar-associated protein 1 uncharacterized LOC101248051 uncharacterized LOC4329017 microfibrillar-associated protein 1 microfibrillar-associated protein 1A microfibrillar-associated protein 1A uncharacterized LOC100258185 uncharacterized LOC7489700 uncharacterized LOC7459186 microfibrillar-associated protein 1 microfibrillar-associated protein 1 microfibrillar-associated protein 1 microfibrillar-associated protein 1 microfibrillar-associated protein 1-like microfibrillar-associated protein 1 microfibrillar-associated protein 1 microfibrillar-associated protein 1A-like microfibrillar-associated protein 1A-like microfibrillar-associated protein 1A-like microfibrillar-associated protein 1-like microfibrillar-associated protein 1-like uncharacterized LOC102615147 microfibrillar-associated protein 1 uncharacterized LOC107817798 uncharacterized LOC107808711
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03040 Spliceosome 7
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03040 Spliceosome 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03040 Spliceosome 6
gma03015 mRNA surveillance pathway 2
gma03250 Viral life cycle - HIV-1 2
gma03022 Basal transcription factors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03250 Viral life cycle - HIV-1 6
gma03015 mRNA surveillance pathway 5
gma03040 Spliceosome 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03040 Spliceosome 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03022 Basal transcription factors 2
zma03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03040 Spliceosome 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03050 Proteasome 5
bra03040 Spliceosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03040 Spliceosome 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03008 Ribosome biogenesis in eukaryotes 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03040 Spliceosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03040 Spliceosome 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03040 Spliceosome 7
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03040 Spliceosome 8
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03040 Spliceosome 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03040 Spliceosome 4
hvu03020 RNA polymerase 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03040 Spliceosome 2
ghi00970 Aminoacyl-tRNA biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00760 Nicotinate and nicotinamide metabolism 2
bna01240 Biosynthesis of cofactors 2
bna03040 Spliceosome 2
bna00040 Pentose and glucuronate interconversions 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03040 Spliceosome 5
sbi04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03040 Spliceosome 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03040 Spliceosome 5
bdi03050 Proteasome 4
bdi04141 Protein processing in endoplasmic reticulum 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03040 Spliceosome 4
nta03450 Non-homologous end-joining 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03040 Spliceosome 4
nta03450 Non-homologous end-joining 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 5727758 826419 831658 100814356 100785354 101248051 4329017 103654338 103845891 103856272 100258185 7489700 7459186 11409733 123072089 123080377 123063186 123445305 107891216 107913608 106433583 106387753 106386533 110435675 102578859 102615147 100838204 107817798 107808711
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