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Orthologous genes in OrthoFinder**

Species Gene Description
 cre-r.1   CHLRE_02g118950v5   uncharacterized protein 
 ath-u.5   emb1129   Nucleic acid-binding, OB-fold-like protein 
 gma-u.5   100794499   30S ribosomal protein S17-like 
 gma-u.5   100500188   uncharacterized LOC100500188 
 gma-u.5   100305504   uncharacterized LOC100305504 
 sly-u.5   101256066   uncharacterized LOC101256066 
 osa-u.5   4345370   30S ribosomal protein S17 
 zma-u.5   100194399   30S ribosomal protein S17, chloroplastic 
 zma-u.5   100283761   30S ribosomal protein S17-like 
 vvi-u.5   100244712   uncharacterized LOC100244712 
 ppo-u.5   18107889   uncharacterized LOC18107889 
 ppo-u.5   18099962   uncharacterized LOC18099962 
 mtr-u.5   11433959   30S ribosomal protein S17 
 mtr-u.5   11422740   30S ribosomal protein S17 

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Top 50 coexpressed genes to CHLRE_02g118950v5 (cre-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to CHLRE_02g118950v5 (cre-r.1 coexpression data)

CoexMap"5727958"


creCHLRE_02g118950v5 | Entrez gene ID : 5727958      
Species cre ath gma sly osa zma vvi ppo mtr sbi nta bra hvu cit bdi sot tae bna ghi
Paralog 1 1 3 1 1 2 1 2 2 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG cre03010 [list] [network] Ribosome (149 genes)
GO BP
GO:0006412 [list] [network] translation  (268 genes)  IEA  
GO CC
GO:0005840 [list] [network] ribosome  (168 genes)  IEA  
GO:0005739 [list] [network] mitochondrion  (441 genes)  IEA  
GO MF
GO:0003735 [list] [network] structural constituent of ribosome  (164 genes)  IEA  
Protein XP_001702448.1 [sequence] [blastp]
Subcellular
localization
wolf
chlo 6,  nucl 1,  cyto 1,  cyto_nucl 1  (predict for XP_001702448.1)
Subcellular
localization
TargetP
mito 5,  chlo 4  (predict for XP_001702448.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

cre-r.1
for
CHLRE_02g118950v5

.
ath-u.5
for
emb1129

.
gma-u.5
for
100794499

.
gma-u.5
for
100500188

.
gma-u.5
for
100305504

.
sly-u.5
for
101256066

.
osa-u.5
for
4345370

.
zma-u.5
for
100194399

.
zma-u.5
for
100283761

.
vvi-u.5
for
100244712

.
ppo-u.5
for
18107889

.
ppo-u.5
for
18099962

.
mtr-u.5
for
11433959

.
mtr-u.5
for
11422740

.


Ortholog ID: 5113
Species ath gma gma sly osa zma zma bra vvi ppo ppo mtr mtr tae tae hvu hvu ghi ghi bna bna cre sbi sbi sot cit cit bdi nta nta
Symbol emb1129 LOC100305504 LOC100794499 LOC101256066 LOC4345370 LOC100194399 LOC100283761 LOC103869514 LOC100244712 LOC18107889 LOC18099962 LOC11422740 LOC11433959 LOC123119381 LOC123081020 LOC123395618 LOC123441191 LOC121217923 LOC107904436 LOC125608960 LOC106446850 CHLRE_02g118950v5 LOC8081352 LOC8080615 LOC102602694 LOC102628418 LOC102607520 LOC100841573 LOC107807588 LOC107825094
Function* Nucleic acid-binding, OB-fold-like protein uncharacterized LOC100305504 30S ribosomal protein S17-like uncharacterized LOC101256066 30S ribosomal protein S17 30S ribosomal protein S17, chloroplastic 30S ribosomal protein S17-like 30S ribosomal protein S17 uncharacterized LOC100244712 uncharacterized LOC18107889 uncharacterized LOC18099962 30S ribosomal protein S17 30S ribosomal protein S17 30S ribosomal protein S17 30S ribosomal protein S17 30S ribosomal protein S17-like 30S ribosomal protein S17-like 30S ribosomal protein S17, chloroplastic 30S ribosomal protein S17 30S ribosomal protein S17-like 30S ribosomal protein S17 uncharacterized protein 30S ribosomal protein S17 30S ribosomal protein S17 30S ribosomal protein S17-like uncharacterized LOC102628418 uncharacterized LOC102607520 30S ribosomal protein S17 uncharacterized LOC107807588 uncharacterized LOC107825094
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03010 Ribosome 11
ath03040 Spliceosome 2
ath03020 RNA polymerase 2
ath03420 Nucleotide excision repair 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03010 Ribosome 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03010 Ribosome 9
gma00195 Photosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03010 Ribosome 10
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03010 Ribosome 5
osa03008 Ribosome biogenesis in eukaryotes 3
osa01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03010 Ribosome 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03010 Ribosome 20
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03010 Ribosome 20
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03040 Spliceosome 3
vvi03010 Ribosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03010 Ribosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03010 Ribosome 18
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03040 Spliceosome 4
mtr03010 Ribosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03040 Spliceosome 5
mtr03010 Ribosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03010 Ribosome 6
tae00270 Cysteine and methionine metabolism 6
tae00330 Arginine and proline metabolism 6
tae00480 Glutathione metabolism 6
tae00240 Pyrimidine metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03010 Ribosome 16
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03010 Ribosome 8
hvu03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03010 Ribosome 4
hvu03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03010 Ribosome 7
ghi03008 Ribosome biogenesis in eukaryotes 4
ghi00330 Arginine and proline metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03010 Ribosome 15
ghi03008 Ribosome biogenesis in eukaryotes 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03010 Ribosome 21
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03010 Ribosome 15
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cre03010 Ribosome 13
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03010 Ribosome 15
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03010 Ribosome 11
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03010 Ribosome 13
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03010 Ribosome 13
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03010 Ribosome 11
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03010 Ribosome 5
bdi03040 Spliceosome 4
bdi03013 Nucleocytoplasmic transport 2
bdi03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03010 Ribosome 10
nta03040 Spliceosome 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03010 Ribosome 17
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 841363 100305504 100794499 101256066 4345370 100194399 100283761 103869514 100244712 18107889 18099962 11422740 11433959 123119381 123081020 123395618 123441191 121217923 107904436 125608960 106446850 5727958 8081352 8080615 102602694 102628418 102607520 100841573 107807588 107825094
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