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Orthologous genes in OrthoFinder**

Species Gene Description
 cre-r.1   CHLRE_10g419550v5   uncharacterized protein 
 cre-r.1   CHLRE_10g419600v5   uncharacterized protein 
 ath-u.5   AT4G18930   RNA ligase/cyclic nucleotide phosphodiesterase family protein 
 gma-u.5   100799568   cyclic phosphodiesterase 
 sly-u.5   101264483   cyclic phosphodiesterase 
 sly-u.5   101246022   cyclic phosphodiesterase-like 
 osa-u.5   4339332   cyclic phosphodiesterase 
 zma-u.5   100285560   cyclic phosphodiesterase 
 bra-r.6   103856946   cyclic phosphodiesterase 
 bra-r.6   103834092   cyclic phosphodiesterase 
 vvi-u.5   109123258   cyclic phosphodiesterase 
 ppo-u.5   7471850   cyclic phosphodiesterase 
 mtr-u.5   11410369   cyclic phosphodiesterase 
 tae-r.2   123063304   cyclic phosphodiesterase 
 tae-r.2   123140216   cyclic phosphodiesterase 
 tae-r.2   123159573   cyclic phosphodiesterase 
 hvu-r.1   123409727   cyclic phosphodiesterase-like 
 hvu-r.1   123447085   cyclic phosphodiesterase-like 
 ghi-r.1   107938544   cyclic phosphodiesterase 
 ghi-r.1   107962162   cyclic phosphodiesterase 
 bna-r.1   106431217   cyclic phosphodiesterase 
 bna-r.1   106423195   cyclic phosphodiesterase 
 sbi-r.1   8082980   cyclic phosphodiesterase 
 sot-r.1   102587421   cyclic phosphodiesterase 
 sot-r.1   107062256   cyclic phosphodiesterase-like 
 cit-r.1   102619157   cyclic phosphodiesterase 
 bdi-r.1   100828082   cyclic phosphodiesterase 
 nta-r.1   107827209   cyclic phosphodiesterase-like 
 nta-r.1   107808778   cyclic phosphodiesterase 
 nta-r.1   107773860   cyclic phosphodiesterase-like 

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Top 50 coexpressed genes to CHLRE_10g419550v5 (cre-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to CHLRE_10g419550v5 (cre-r.1 coexpression data)

CoexMap"5728302"


creCHLRE_10g419550v5 | Entrez gene ID : 5728302      
Species cre ath gma sly osa zma bra vvi ppo mtr tae hvu ghi bna sbi sot cit bdi nta
Paralog 2 1 1 2 1 1 2 1 1 1 3 2 2 2 1 2 1 1 3
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0009187 [list] [network] cyclic nucleotide metabolic process  (128 genes)  IEA  
GO CC
GO MF
GO:0004113 [list] [network] 2',3'-cyclic-nucleotide 3'-phosphodiesterase activity  (2 genes)  IEA  
Protein XP_001702618.1 [sequence] [blastp]
XP_042919838.1 [sequence] [blastp]
Subcellular
localization
wolf
chlo 9,  cyto 1,  extr 1  (predict for XP_001702618.1)
cyto 6,  nucl_plas 1,  nucl 1,  plas 1,  chlo 1,  mito 1,  chlo_mito 1  (predict for XP_042919838.1)
Subcellular
localization
TargetP
scret 6  (predict for XP_001702618.1)
other 8  (predict for XP_042919838.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

cre-r.1
for
CHLRE_10g419550v5
cre-r.1
for
CHLRE_10g419600v5
ath-u.5
for
AT4G18930
gma-u.5
for
100799568
sly-u.5
for
101264483
sly-u.5
for
101246022
osa-u.5
for
4339332
zma-u.5
for
100285560
bra-r.6
for
103856946
bra-r.6
for
103834092
vvi-u.5
for
109123258
ppo-u.5
for
7471850
mtr-u.5
for
11410369
tae-r.2
for
123063304
tae-r.2
for
123140216
tae-r.2
for
123159573
hvu-r.1
for
123409727
hvu-r.1
for
123447085
ghi-r.1
for
107938544
ghi-r.1
for
107962162
bna-r.1
for
106431217
bna-r.1
for
106423195
sbi-r.1
for
8082980
sot-r.1
for
102587421
sot-r.1
for
107062256
cit-r.1
for
102619157
bdi-r.1
for
100828082
nta-r.1
for
107827209
nta-r.1
for
107808778
nta-r.1
for
107773860


Ortholog ID: 5796
Species cre cre ath gma sly sly osa zma bra bra vvi ppo mtr tae tae tae hvu hvu ghi ghi bna bna sbi sot sot cit bdi nta nta nta
Symbol CHLRE_10g419550v5 CHLRE_10g419600v5 AT4G18930 LOC100799568 LOC101264483 LOC101246022 LOC4339332 LOC100285560 LOC103856946 LOC103834092 LOC109123258 LOC7471850 LOC11410369 LOC123063304 LOC123159573 LOC123182647 LOC123409727 LOC123447085 LOC107938544 LOC107962162 LOC106431217 LOC106423195 LOC8082980 LOC102587421 LOC107062256 LOC102619157 LOC100828082 LOC107827209 LOC107808778 LOC107773860
Function* uncharacterized protein uncharacterized protein RNA ligase/cyclic nucleotide phosphodiesterase family protein cyclic phosphodiesterase cyclic phosphodiesterase cyclic phosphodiesterase-like cyclic phosphodiesterase cyclic phosphodiesterase cyclic phosphodiesterase cyclic phosphodiesterase cyclic phosphodiesterase cyclic phosphodiesterase cyclic phosphodiesterase cyclic phosphodiesterase cyclic phosphodiesterase cyclic phosphodiesterase cyclic phosphodiesterase-like cyclic phosphodiesterase-like cyclic phosphodiesterase cyclic phosphodiesterase cyclic phosphodiesterase cyclic phosphodiesterase cyclic phosphodiesterase cyclic phosphodiesterase cyclic phosphodiesterase-like cyclic phosphodiesterase cyclic phosphodiesterase cyclic phosphodiesterase-like cyclic phosphodiesterase cyclic phosphodiesterase-like
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cre04144 Endocytosis 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath00620 Pyruvate metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma00561 Glycerolipid metabolism 3
gma00564 Glycerophospholipid metabolism 2
gma00740 Riboflavin metabolism 2
gma04142 Lysosome 2
gma00566 Sulfoquinovose metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03020 RNA polymerase 2
sly03420 Nucleotide excision repair 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly04141 Protein processing in endoplasmic reticulum 3
sly00520 Amino sugar and nucleotide sugar metabolism 2
sly01250 Biosynthesis of nucleotide sugars 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa00190 Oxidative phosphorylation 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma00564 Glycerophospholipid metabolism 2
zma00561 Glycerolipid metabolism 2
zma00740 Riboflavin metabolism 2
zma04142 Lysosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra00190 Oxidative phosphorylation 7
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr00190 Oxidative phosphorylation 6
mtr04145 Phagosome 2
mtr01200 Carbon metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00190 Oxidative phosphorylation 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae04626 Plant-pathogen interaction 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00190 Oxidative phosphorylation 10
tae03250 Viral life cycle - HIV-1 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu04141 Protein processing in endoplasmic reticulum 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu01200 Carbon metabolism 2
hvu01210 2-Oxocarboxylic acid metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00190 Oxidative phosphorylation 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00190 Oxidative phosphorylation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi00561 Glycerolipid metabolism 3
sbi00566 Sulfoquinovose metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot01210 2-Oxocarboxylic acid metabolism 2
sot03272 Virion - Hepatitis viruses 2
sot04144 Endocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03040 Spliceosome 3
nta04141 Protein processing in endoplasmic reticulum 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03040 Spliceosome 2
nta04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00190 Oxidative phosphorylation 5
nta04145 Phagosome 5
nta00541 Biosynthesis of various nucleotide sugars 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 5728302 5728301 827628 100799568 101264483 101246022 4339332 100285560 103856946 103834092 109123258 7471850 11410369 123063304 123159573 123182647 123409727 123447085 107938544 107962162 106431217 106423195 8082980 102587421 107062256 102619157 100828082 107827209 107808778 107773860
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